Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941234 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 37781369 ~ 37781447 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037563.1 | True | 79 | mRNA | 0.51 | 1 | 37781369 | 37781447 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496132 | LOC106588485 | coding | downstream | 24159 | 37755017 ~ 37757210 (-) |
| LOC110496131 | borea | coding | downstream | 37248 | 37738841 ~ 37744121 (-) |
| prdm1b | LOC106588492 | coding | downstream | 691267 | 37077027 ~ 37090104 (-) |
| LOC110496124 | LOC106588493 | coding | downstream | 724620 | 36990241 ~ 37056749 (-) |
| zgc:101785 | LOC106588494 | coding | downstream | 791692 | 36974996 ~ 36989677 (-) |
| LOC110496137 | LOC106570035 | coding | upstream | 62589 | 37844036 ~ 37854732 (-) |
| ppt1 | LOC106588481 | coding | upstream | 140706 | 37922153 ~ 37930745 (-) |
| LOC110496145 | LOC106588474 | coding | upstream | 196670 | 37978117 ~ 37992369 (-) |
| LOC110496154 | LOC106588291 | coding | upstream | 340129 | 38121576 ~ 38152320 (-) |
| LOC118941154 | NA | coding | upstream | 359282 | 38140729 ~ 38141362 (-) |
| G1545820 | NA | non-coding | downstream | 60831 | 37718313 ~ 37720538 (-) |
| G1545811 | LOC106588469 | non-coding | downstream | 68485 | 37712418 ~ 37712884 (-) |
| G1545810 | NA | non-coding | downstream | 69145 | 37712004 ~ 37712224 (-) |
| G1545809 | NA | non-coding | downstream | 71407 | 37709592 ~ 37709962 (-) |
| G1545807 | LOC107592052 | non-coding | downstream | 74631 | 37706273 ~ 37706738 (-) |
| G1545864 | NA | non-coding | upstream | 31296 | 37812743 ~ 37814324 (-) |
| G1545867 | LOC106588480 | non-coding | upstream | 37379 | 37818826 ~ 37820563 (-) |
| G1545889 | NA | non-coding | upstream | 89984 | 37871431 ~ 37871638 (-) |
| G1545890 | NA | non-coding | upstream | 91884 | 37873331 ~ 37873563 (-) |
| G1545892 | NA | non-coding | upstream | 92952 | 37874399 ~ 37874619 (-) |
| G1544806 | NA | other | downstream | 479195 | 37301508 ~ 37302174 (-) |
| G1543346 | LOC106588513 | other | downstream | 1768683 | 36010987 ~ 36012686 (-) |
| G1543128 | LOC106588245 | other | downstream | 2277212 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 2284387 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 2431707 | 35346895 ~ 35351655 (-) |
| G1546053 | NA | other | upstream | 383803 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 778202 | 38557052 ~ 38563365 (-) |
| LOC110496175 | LOC104924380 | other | upstream | 892994 | 38674378 ~ 38676029 (-) |
