LOC118941154


Basic Information

Item Value
gene id LOC118941154
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 38140729 ~ 38141362 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037460.1
tacggcctgggtggaccaggacaaacacacaggtgactacatcatgaagctggttgagagaatgtcaagagtgtgcaaagatgtcatcaaggtgtcacgacttccgccgaagtcggctcctctccctgttcaggCGGCATTCGACGGTCGacatcaccggctttctagccatcgccactccatttttcatgtatccatttgttttgtcttgttctctgcacacctggttttcattccccaaacaattcatatgtatttattcctctgttccccatcatgtatTTGTGTAggattgtttgtgttacgtgtatTTTGATATTGTGGATATTGTTACGCGCATTACTTTTTGTCTATGTTCCGTGTTTTGGgcacattttatgttattttgtgCTGTCATTTTGACCGGAATAAAAGTGCGCCTGTTCAcgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037460.1 True 431 mRNA 0.44 2 38140729 38141362

Neighbor

gene id symbol gene type direction distance location
LOC110496145 LOC106588474 coding downstream 148360 37978117 ~ 37992369 (-)
ppt1 LOC106588481 coding downstream 209984 37922153 ~ 37930745 (-)
LOC110496137 LOC106570035 coding downstream 285997 37844036 ~ 37854732 (-)
LOC110496134 LOC106511154 coding downstream 343785 37758788 ~ 37796944 (-)
trnaa-ugc-137 NA coding upstream 154521 38295883 ~ 38295956 (-)
LOC118936476 LOC106588460 coding upstream 347508 38488870 ~ 38491346 (-)
LOC110496164 LOC106588460 coding upstream 360757 38502119 ~ 38505762 (-)
LOC110496165 LOC106588460 coding upstream 374653 38516015 ~ 38518074 (-)
LOC118940976 LOC106588460 coding upstream 376541 38517903 ~ 38519789 (-)
G1546013 NA non-coding downstream 33300 38098706 ~ 38107429 (-)
G1546011 NA non-coding downstream 44398 38095976 ~ 38096331 (-)
G1545988 NA non-coding downstream 73178 38065502 ~ 38067551 (-)
G1545989 NA non-coding downstream 75598 38064584 ~ 38065131 (-)
G1545986 NA non-coding downstream 78490 38061927 ~ 38062239 (-)
G1546047 NA non-coding upstream 4150 38145512 ~ 38145712 (-)
LOC110496154 LOC106588291 non-coding upstream 6228 38121576 ~ 38152320 (-)
G1545996 LOC106570014 non-coding upstream 15803 38157165 ~ 38159050 (-)
G1546061 LOC106588464 non-coding upstream 47611 38188973 ~ 38192777 (-)
G1546072 NA non-coding upstream 58784 38200146 ~ 38203696 (-)
G1544806 NA other downstream 838555 37301508 ~ 37302174 (-)
G1543346 LOC106588513 other downstream 2128043 36010987 ~ 36012686 (-)
G1543128 LOC106588245 other downstream 2636572 35452618 ~ 35504157 (-)
G1546053 NA other upstream 23888 38165250 ~ 38214049 (-)
LOC110496167 LOC106588455 other upstream 418287 38557052 ~ 38563365 (-)
LOC110496175 LOC104924380 other upstream 533079 38674378 ~ 38676029 (-)
G1546385 LOC106588448 other upstream 626735 38768097 ~ 38773684 (-)

Expression


Co-expression Network