zn706 (LOC104962755)


Basic Information

Item Value
gene id zn706
gene name LOC104962755
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 38522603 ~ 38528524 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001160599.1
GGTACAACACCCAAGGAGAACGAAGACGGGCGAAACAACGCGAagGTAGGCTATGGCTCGCGGGCAACAGAAGATTCAATCCCAGCAAAAGAACGCCAAGGCGGCAGCTGCTAAAAAGAAGGGAGCGGCAGCAGACCAGAAGACTGCAGCCAAGGCAGCACTTGTCCACACCTGTCCTGTATGCCGGACGCAGATGCCGGATCCGAAgacattcaaacagcactttgagAGCAAGCATCCCAAGTCCCCAATGCCACCAGAGCTGGTTGATGTTGAGGCTTAAAACGATCACACACACAACGGACCTACAGTTGGGaTACACGATTTGAACACTGCGACTGGTATAATGGCGTCAAGGGACATAACACTGAGACCCCTGGACATGGGTGGGGGAATATTTGTGTGACGACCTACAATGGGGGCAAAAGCTCACCGGCACCCCATCTTATATGTCCAACCACCCCTGAACGTCAGACTGTATTGAAGCAACCATCTTACTTCTATGAGCCCACTCTACGTACATCCCATATTCCTATGCTGCTTCCTTCACTTAATTCCTCTTTCAATAACATCTAGACTAATTTACAAGTCTACAAGTTTCATTACTTTTTTTGCTACTTTTTCTCATCTGTATACTGCTGTCCTACGTTTGCCCCCAACTCTTTTCTATACCTCCCCCCATACACTTGTTCAGATGTTCTTGATCATTTCTGCTTTCTTTGAGGACGGTGTCATGGATTTGATATAAGGTCAAGACCGTGCCTGGTTCTGCCTATATAAAGACCCTGGTCGAAACGAGGCCAAATCCTGTAGTAGTTTTGGTCTGTATGCAAAGATCACTTTTGATAATCCATGTTGtaacaatttttttgttgttgctttttaCCATTTCCAATAAATTTTGCGATAT
>TU1769356
GCCAACTTCCGATTCTGGTACAACACCCAAGGAGAACGAAGACGGGCGAAACAACGCGAagGTAGGCTATGGCTCGCGGGCAACAGAAGATTCAATCCCAGCAAAAGAACGCCAAGGCGGCAGCTGCTAAAAAGAAGGGAGCGGCAGCAGACCAGAAGACTGCAGCCAAGGCAGCACTTGTCCACACCTGTCCTGTATGCCGGACGCAGATGCCGGATCCGAAgacattcaaacagcactttgagAGCAAGCATCCCAAGTCCCCAATGCCACCAGAGCTGGTTGATGTTGAGGCTTAAAACGATCACACACACAACGGACCTACAGTTGGGaTACACGATTTGAACACTGCGACTGGTATAATGGCGTCAAGGGACATAACACTGAGACCCCTGGACATGGGTGGGGGAATATTTGTGTGACGACCTACAATGGGGGCAAAAGCTCACCGGCACCCCATCTTATATGTCCAACCACCCCTGAACGTCAGACTGTATTGAAGCAACCATCTTACTTCTATGAGCCCACTCTACGTACATCCCATATTCCTATGCTGCTTCCTTCACTTAATTCCTCTTTCAATAACATCTAGACTAATTTACAAGTCTACAAGTTTCATTACTTTTTTTGCTACTTTTTCTCATCTGTATACTGCTGTCCTACGTTTGCCCCCAACTCTTTTCTATACCTCCCCCCATACACTTGTTCAGATGTTCTTGATCATTTCTGCTTTCTTTGAGGACGGTGTCATGGATTTGATATAAGGTCAAGACCGTGCCTGGTTCTGCCTATATAAAGACCCTGGTCGAAACGAGGCCAAATCCTGTAGTAGTTTTGGTCTGTATGCAAAGATCACTTTTGATAATCCATGTTGtaacaatttttttgttgttgctttttaCCATTTCCAATAAATTTTGCGATATATATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001160599.1 False 910 mRNA 0.46 4 38522608 38528508
TU1769356 True 931 lncRNA 0.46 4 38522603 38528524

Neighbor

gene id symbol gene type direction distance location
LOC118940976 LOC106588460 coding downstream 2819 38517903 ~ 38519789 (-)
LOC110496165 LOC106588460 coding downstream 4534 38516015 ~ 38518074 (-)
LOC110496164 LOC106588460 coding downstream 16846 38502119 ~ 38505762 (-)
LOC118936476 LOC106588460 coding downstream 31262 38488870 ~ 38491346 (-)
trnaa-ugc-137 NA coding downstream 226652 38295883 ~ 38295956 (-)
LOC110496166 LOC106588455 coding upstream 12558 38478939 ~ 38553932 (-)
LOC110496167 LOC106588455 coding upstream 28544 38557052 ~ 38563365 (-)
LOC110496170 LOC106588454 coding upstream 82945 38611453 ~ 38617573 (-)
LOC110496173 LOC106588288 coding upstream 119852 38648360 ~ 38665538 (-)
LOC110496175 LOC104924380 coding upstream 145870 38674378 ~ 38676029 (-)
G1546250 NA non-coding downstream 10991 38496929 ~ 38511617 (-)
G1546244 NA non-coding downstream 19832 38488873 ~ 38502776 (-)
G1546226 NA non-coding downstream 84856 38434987 ~ 38437752 (-)
G1546193 NA non-coding downstream 166113 38355548 ~ 38356495 (-)
G1546291 NA non-coding upstream 22889 38551397 ~ 38551644 (-)
G1546303 mag non-coding upstream 35446 38563954 ~ 38570730 (-)
G1546308 NA non-coding upstream 47624 38576132 ~ 38576346 (-)
G1546312 NA non-coding upstream 51669 38580177 ~ 38580474 (-)
G1546313 NA non-coding upstream 53078 38581586 ~ 38581888 (-)
G1546053 NA other downstream 308559 38165250 ~ 38214049 (-)
LOC110496154 LOC106588291 other downstream 370376 38121576 ~ 38152320 (-)
ppt1 LOC106588481 other downstream 599274 37922153 ~ 37930745 (-)
G1544806 NA other downstream 1220434 37301508 ~ 37302174 (-)
G1543346 LOC106588513 other downstream 2509922 36010987 ~ 36012686 (-)
G1546385 LOC106588448 other upstream 239589 38768097 ~ 38773684 (-)
G1546396 LOC106588446 other upstream 247776 38776284 ~ 38787801 (-)
LOC110496208 LOC106588417 other upstream 1097267 39625771 ~ 39641803 (-)

Expression


Co-expression Network