Item | Value |
---|---|
gene id | LOC110496171 |
gene name | LOC106588453 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048582.1 |
NCBI id | CM023236.2 |
chromosome length | 74657750 |
location | 38617802 ~ 38631694 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
epsin-1-like isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021571919.2 | False | 2291 | mRNA | 0.52 | 11 | 38617802 | 38628558 |
XM_021571916.2 | False | 4060 | mRNA | 0.47 | 11 | 38617802 | 38631694 |
XM_021571917.2 | True | 4149 | mRNA | 0.47 | 11 | 38617951 | 38631694 |
38,602,000
38,604,000
38,606,000
38,608,000
38,610,000
38,612,000
38,614,000
38,616,000
38,618,000
38,620,000
38,622,000
38,624,000
38,626,000
38,628,000
38,630,000
38,632,000
NC_048582.1
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gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
si:ch211-171h4.3 | LOC106588290 | coding | upstream | 20444 | 38593275 ~ 38597358 (+) |
LOC110496168 | mag | coding | upstream | 45472 | 38563969 ~ 38572330 (+) |
LOC110496162 | LOC106588459 | coding | upstream | 121335 | 38482660 ~ 38496467 (+) |
LOC110496159 | LOC106588461 | coding | upstream | 136471 | 38207643 ~ 38481331 (+) |
LOC110496158 | LOC106588463 | coding | upstream | 413264 | 38193174 ~ 38204538 (+) |
LOC110496172 | LOC106588452 | coding | downstream | 813 | 38632507 ~ 38645625 (+) |
LOC110496176 | LOC106588451 | coding | downstream | 46281 | 38677975 ~ 38696088 (+) |
cnot3b | LOC106588450 | coding | downstream | 65427 | 38697121 ~ 38713314 (+) |
LOC110496812 | LOC106588449 | coding | downstream | 84791 | 38716485 ~ 38730617 (+) |
LOC110496178 | LOC106588448 | coding | downstream | 122371 | 38754065 ~ 38773708 (+) |
G1545493 | NA | non-coding | upstream | 12309 | 38605268 ~ 38605493 (+) |
G1545276 | NA | non-coding | upstream | 93969 | 38522599 ~ 38523833 (+) |
G1545436 | NA | non-coding | upstream | 100870 | 38502789 ~ 38516932 (+) |
G1545432 | NA | non-coding | upstream | 109000 | 38495407 ~ 38508802 (+) |
G1545419 | NA | non-coding | upstream | 180115 | 38435118 ~ 38437687 (+) |
G1545508 | NA | non-coding | downstream | 50969 | 38682663 ~ 38685107 (+) |
G1545537 | NA | non-coding | downstream | 55566 | 38687260 ~ 38687551 (+) |
G1545558 | NA | non-coding | downstream | 120870 | 38752564 ~ 38752793 (+) |
G1544455 | NA | other | upstream | 1561315 | 37055983 ~ 37056487 (+) |
G1544137 | NA | other | upstream | 1754619 | 36862923 ~ 36863183 (+) |
G1544007 | NA | other | upstream | 1852569 | 36764294 ~ 36765233 (+) |
LOC110496111 | LOC106588509 | other | upstream | 2526196 | 36076661 ~ 36091606 (+) |
G1545533 | LOC104965079 | other | downstream | 43333 | 38675027 ~ 38676004 (+) |
G1546605 | LOC106588434 | other | downstream | 484794 | 39116488 ~ 39120019 (+) |
G1546641 | NA | other | downstream | 501425 | 39133119 ~ 39146252 (+) |
G1546713 | LOC106569985 | other | downstream | 726717 | 39358411 ~ 39372481 (+) |