Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110496172 |
| gene name | LOC106588452 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38632507 ~ 38645625 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| germ cell-specific gene 1-like protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021571921.2 | True | 2587 | mRNA | 0.50 | 7 | 38632507 | 38645625 |
38,628,000
38,630,000
38,632,000
38,634,000
38,636,000
38,638,000
38,640,000
38,642,000
38,644,000
38,646,000
38,648,000
38,650,000
38,652,000
38,654,000
38,656,000
38,658,000
NC_048582.1
Loading
Loading
Loading
Loading
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496171 | LOC106588453 | coding | upstream | 813 | 38617802 ~ 38631694 (+) |
| si:ch211-171h4.3 | LOC106588290 | coding | upstream | 35149 | 38593275 ~ 38597358 (+) |
| LOC110496168 | mag | coding | upstream | 60177 | 38563969 ~ 38572330 (+) |
| LOC110496162 | LOC106588459 | coding | upstream | 136040 | 38482660 ~ 38496467 (+) |
| LOC110496159 | LOC106588461 | coding | upstream | 151176 | 38207643 ~ 38481331 (+) |
| LOC110496176 | LOC106588451 | coding | downstream | 32350 | 38677975 ~ 38696088 (+) |
| cnot3b | LOC106588450 | coding | downstream | 51496 | 38697121 ~ 38713314 (+) |
| LOC110496812 | LOC106588449 | coding | downstream | 70860 | 38716485 ~ 38730617 (+) |
| LOC110496178 | LOC106588448 | coding | downstream | 108440 | 38754065 ~ 38773708 (+) |
| LOC110496179 | LOC106588446 | coding | downstream | 130623 | 38776248 ~ 38787830 (+) |
| G1545493 | NA | non-coding | upstream | 27014 | 38605268 ~ 38605493 (+) |
| G1545276 | NA | non-coding | upstream | 108674 | 38522599 ~ 38523833 (+) |
| G1545436 | NA | non-coding | upstream | 115575 | 38502789 ~ 38516932 (+) |
| G1545432 | NA | non-coding | upstream | 123705 | 38495407 ~ 38508802 (+) |
| G1545419 | NA | non-coding | upstream | 194820 | 38435118 ~ 38437687 (+) |
| G1545508 | NA | non-coding | downstream | 37038 | 38682663 ~ 38685107 (+) |
| G1545537 | NA | non-coding | downstream | 41635 | 38687260 ~ 38687551 (+) |
| G1545558 | NA | non-coding | downstream | 106939 | 38752564 ~ 38752793 (+) |
| LOC110496158 | LOC106588463 | other | upstream | 428052 | 38193174 ~ 38204538 (+) |
| G1544455 | NA | other | upstream | 1576020 | 37055983 ~ 37056487 (+) |
| G1544137 | NA | other | upstream | 1769324 | 36862923 ~ 36863183 (+) |
| G1544007 | NA | other | upstream | 1867274 | 36764294 ~ 36765233 (+) |
| LOC110496111 | LOC106588509 | other | upstream | 2540901 | 36076661 ~ 36091606 (+) |
| G1545533 | LOC104965079 | other | downstream | 29402 | 38675027 ~ 38676004 (+) |
| G1546605 | LOC106588434 | other | downstream | 470863 | 39116488 ~ 39120019 (+) |
| G1546641 | NA | other | downstream | 487494 | 39133119 ~ 39146252 (+) |
| G1546713 | LOC106569985 | other | downstream | 712786 | 39358411 ~ 39372481 (+) |
