Item | Value |
---|---|
gene id | cnot3b |
gene name | LOC106588450 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048582.1 |
NCBI id | CM023236.2 |
chromosome length | 74657750 |
location | 38697121 ~ 38713314 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
CCR4-NOT transcription complex subunit 3-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036952711.1 | False | 4632 | mRNA | 0.51 | 18 | 38697121 | 38713314 |
XM_036952712.1 | False | 4626 | mRNA | 0.51 | 18 | 38697121 | 38713314 |
XM_036952713.1 | False | 4587 | mRNA | 0.51 | 18 | 38697121 | 38713314 |
XM_036952714.1 | True | 4329 | mRNA | 0.51 | 14 | 38704454 | 38713314 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110496176 | LOC106588451 | coding | upstream | 3148 | 38677975 ~ 38696088 (+) |
LOC110496172 | LOC106588452 | coding | upstream | 51496 | 38632507 ~ 38645625 (+) |
LOC110496171 | LOC106588453 | coding | upstream | 65427 | 38617802 ~ 38631694 (+) |
si:ch211-171h4.3 | LOC106588290 | coding | upstream | 99763 | 38593275 ~ 38597358 (+) |
LOC110496168 | mag | coding | upstream | 124791 | 38563969 ~ 38572330 (+) |
LOC110496812 | LOC106588449 | coding | downstream | 3171 | 38716485 ~ 38730617 (+) |
LOC110496178 | LOC106588448 | coding | downstream | 40751 | 38754065 ~ 38773708 (+) |
LOC110496179 | LOC106588446 | coding | downstream | 62934 | 38776248 ~ 38787830 (+) |
LOC110496813 | LOC106570003 | coding | downstream | 103950 | 38817264 ~ 38880268 (+) |
LOC110496814 | LOC106570002 | coding | downstream | 188898 | 38902212 ~ 38935725 (+) |
G1545537 | NA | non-coding | upstream | 9570 | 38687260 ~ 38687551 (+) |
G1545508 | NA | non-coding | upstream | 12014 | 38682663 ~ 38685107 (+) |
G1545493 | NA | non-coding | upstream | 91628 | 38605268 ~ 38605493 (+) |
G1545276 | NA | non-coding | upstream | 173288 | 38522599 ~ 38523833 (+) |
G1545558 | NA | non-coding | downstream | 39250 | 38752564 ~ 38752793 (+) |
G1545570 | NA | non-coding | downstream | 81176 | 38794490 ~ 38794949 (+) |
G1545577 | NA | non-coding | downstream | 86344 | 38799658 ~ 38799909 (+) |
G1545580 | NA | non-coding | downstream | 89248 | 38802562 ~ 38802847 (+) |
G1545533 | LOC104965079 | other | upstream | 21117 | 38675027 ~ 38676004 (+) |
LOC110496158 | LOC106588463 | other | upstream | 492666 | 38193174 ~ 38204538 (+) |
G1544455 | NA | other | upstream | 1640634 | 37055983 ~ 37056487 (+) |
G1544137 | NA | other | upstream | 1833938 | 36862923 ~ 36863183 (+) |
G1546605 | LOC106588434 | other | downstream | 403174 | 39116488 ~ 39120019 (+) |
G1546641 | NA | other | downstream | 419805 | 39133119 ~ 39146252 (+) |
G1546713 | LOC106569985 | other | downstream | 645097 | 39358411 ~ 39372481 (+) |
G1546817 | LOC106588418 | other | downstream | 754140 | 39467454 ~ 39469365 (+) |
G1547334 | LOC107666349 | other | downstream | 1047899 | 39761213 ~ 39761503 (+) |