Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110496812 |
| gene name | LOC106588449 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38716485 ~ 38730617 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036952715.1 | False | 9144 | mRNA | 0.44 | 7 | 38716485 | 38730617 |
| XM_036952716.1 | False | 9075 | mRNA | 0.44 | 6 | 38716488 | 38730617 |
| TU1768482 | True | 575 | lncRNA | 0.39 | 3 | 38716556 | 38720192 |
38,704,000
38,706,000
38,708,000
38,710,000
38,712,000
38,714,000
38,716,000
38,718,000
38,720,000
38,720,000
38,722,000
38,724,000
38,726,000
38,728,000
38,730,000
38,732,000
38,734,000
38,736,000
NC_048582.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cnot3b | LOC106588450 | coding | upstream | 3171 | 38697121 ~ 38713314 (+) |
| LOC110496176 | LOC106588451 | coding | upstream | 22512 | 38677975 ~ 38696088 (+) |
| LOC110496172 | LOC106588452 | coding | upstream | 70860 | 38632507 ~ 38645625 (+) |
| LOC110496171 | LOC106588453 | coding | upstream | 84791 | 38617802 ~ 38631694 (+) |
| si:ch211-171h4.3 | LOC106588290 | coding | upstream | 119127 | 38593275 ~ 38597358 (+) |
| LOC110496178 | LOC106588448 | coding | downstream | 23448 | 38754065 ~ 38773708 (+) |
| LOC110496179 | LOC106588446 | coding | downstream | 45631 | 38776248 ~ 38787830 (+) |
| LOC110496813 | LOC106570003 | coding | downstream | 86647 | 38817264 ~ 38880268 (+) |
| LOC110496814 | LOC106570002 | coding | downstream | 171595 | 38902212 ~ 38935725 (+) |
| LOC110496182 | LOC106588443 | coding | downstream | 216331 | 38946948 ~ 38958286 (+) |
| G1545537 | NA | non-coding | upstream | 28934 | 38687260 ~ 38687551 (+) |
| G1545508 | NA | non-coding | upstream | 31378 | 38682663 ~ 38685107 (+) |
| G1545493 | NA | non-coding | upstream | 110992 | 38605268 ~ 38605493 (+) |
| G1545276 | NA | non-coding | upstream | 192652 | 38522599 ~ 38523833 (+) |
| G1545558 | NA | non-coding | downstream | 21947 | 38752564 ~ 38752793 (+) |
| G1545570 | NA | non-coding | downstream | 63873 | 38794490 ~ 38794949 (+) |
| G1545577 | NA | non-coding | downstream | 69041 | 38799658 ~ 38799909 (+) |
| G1545580 | NA | non-coding | downstream | 71945 | 38802562 ~ 38802847 (+) |
| G1545594 | NA | non-coding | downstream | 93259 | 38823876 ~ 38824083 (+) |
| G1545533 | LOC104965079 | other | upstream | 40481 | 38675027 ~ 38676004 (+) |
| LOC110496158 | LOC106588463 | other | upstream | 512030 | 38193174 ~ 38204538 (+) |
| G1544455 | NA | other | upstream | 1659998 | 37055983 ~ 37056487 (+) |
| G1544137 | NA | other | upstream | 1853302 | 36862923 ~ 36863183 (+) |
| G1546605 | LOC106588434 | other | downstream | 385871 | 39116488 ~ 39120019 (+) |
| G1546641 | NA | other | downstream | 402502 | 39133119 ~ 39146252 (+) |
| G1546713 | LOC106569985 | other | downstream | 627794 | 39358411 ~ 39372481 (+) |
| G1546817 | LOC106588418 | other | downstream | 736837 | 39467454 ~ 39469365 (+) |
| G1547334 | LOC107666349 | other | downstream | 1030596 | 39761213 ~ 39761503 (+) |
