Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941155 |
| gene name | LOC106588441 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38995842 ~ 38999455 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036952724.1 | True | 1831 | mRNA | 0.54 | 2 | 38995842 | 38999455 |
38,994,000
38,995,000
38,996,000
38,997,000
38,998,000
38,999,000
38,999,000
39,000,000
39,001,000
39,002,000
39,003,000
39,004,000
NC_048582.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496182 | LOC106588443 | coding | upstream | 37556 | 38946948 ~ 38958286 (+) |
| LOC110496814 | LOC106570002 | coding | upstream | 61923 | 38902212 ~ 38935725 (+) |
| LOC110496813 | LOC106570003 | coding | upstream | 115574 | 38817264 ~ 38880268 (+) |
| LOC110496179 | LOC106588446 | coding | upstream | 208012 | 38776248 ~ 38787830 (+) |
| LOC110496178 | LOC106588448 | coding | upstream | 222134 | 38754065 ~ 38773708 (+) |
| si:dkey-14o18.2 | LOC106588441 | coding | downstream | 54 | 38999509 ~ 39005360 (+) |
| LOC110496930 | LOC106588286 | coding | downstream | 7459 | 39006914 ~ 39009903 (+) |
| LOC110496187 | LOC106588439 | coding | downstream | 30002 | 39029457 ~ 39053644 (+) |
| LOC110496185 | LOC106588438 | coding | downstream | 54272 | 39053727 ~ 39065036 (+) |
| LOC110496189 | LOC106588436 | coding | downstream | 84941 | 39084396 ~ 39112480 (+) |
| G1545667 | NA | non-coding | upstream | 30004 | 38960505 ~ 38965838 (+) |
| G1545598 | NA | non-coding | upstream | 166152 | 38829232 ~ 38829690 (+) |
| G1545597 | NA | non-coding | upstream | 167161 | 38828471 ~ 38828681 (+) |
| G1545595 | NA | non-coding | upstream | 171386 | 38824228 ~ 38824456 (+) |
| G1545688 | NA | non-coding | downstream | 15434 | 39014889 ~ 39020160 (+) |
| G1546672 | NA | non-coding | downstream | 232243 | 39231698 ~ 39232206 (+) |
| G1546707 | NA | non-coding | downstream | 260817 | 39260272 ~ 39260791 (+) |
| G1546717 | LOC106588422 | non-coding | downstream | 290727 | 39290182 ~ 39290983 (+) |
| G1546713 | LOC106569985 | non-coding | downstream | 358956 | 39358411 ~ 39372481 (+) |
| LOC110496176 | LOC106588451 | other | upstream | 304573 | 38677975 ~ 38696088 (+) |
| G1545533 | LOC104965079 | other | upstream | 319838 | 38675027 ~ 38676004 (+) |
| LOC110496158 | LOC106588463 | other | upstream | 791387 | 38193174 ~ 38204538 (+) |
| G1544455 | NA | other | upstream | 1939355 | 37055983 ~ 37056487 (+) |
| G1544137 | NA | other | upstream | 2132659 | 36862923 ~ 36863183 (+) |
| G1546605 | LOC106588434 | other | downstream | 117033 | 39116488 ~ 39120019 (+) |
| G1546641 | NA | other | downstream | 133664 | 39133119 ~ 39146252 (+) |
| G1546817 | LOC106588418 | other | downstream | 467999 | 39467454 ~ 39469365 (+) |
| G1547334 | LOC107666349 | other | downstream | 761758 | 39761213 ~ 39761503 (+) |
