Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110496930 |
| gene name | LOC106588286 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39006914 ~ 39009903 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| C-type lectin domain family 6 member A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021572937.2 | True | 1181 | mRNA | 0.50 | 6 | 39006914 | 39009903 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-14o18.2 | LOC106588441 | coding | upstream | 1554 | 38999509 ~ 39005360 (+) |
| LOC118941155 | LOC106588441 | coding | upstream | 7459 | 38995842 ~ 38999455 (+) |
| LOC110496182 | LOC106588443 | coding | upstream | 48628 | 38946948 ~ 38958286 (+) |
| LOC110496814 | LOC106570002 | coding | upstream | 72995 | 38902212 ~ 38935725 (+) |
| LOC110496813 | LOC106570003 | coding | upstream | 126646 | 38817264 ~ 38880268 (+) |
| LOC110496187 | LOC106588439 | coding | downstream | 19554 | 39029457 ~ 39053644 (+) |
| LOC110496185 | LOC106588438 | coding | downstream | 43824 | 39053727 ~ 39065036 (+) |
| LOC110496189 | LOC106588436 | coding | downstream | 74493 | 39084396 ~ 39112480 (+) |
| LOC110496191 | LOC106588431 | coding | downstream | 171103 | 39181006 ~ 39187628 (+) |
| LOC110496193 | LOC106588432 | coding | downstream | 185730 | 39195633 ~ 39203114 (+) |
| G1545667 | NA | non-coding | upstream | 41076 | 38960505 ~ 38965838 (+) |
| G1545598 | NA | non-coding | upstream | 177224 | 38829232 ~ 38829690 (+) |
| G1545597 | NA | non-coding | upstream | 178233 | 38828471 ~ 38828681 (+) |
| G1545595 | NA | non-coding | upstream | 182458 | 38824228 ~ 38824456 (+) |
| G1545688 | NA | non-coding | downstream | 4986 | 39014889 ~ 39020160 (+) |
| G1546672 | NA | non-coding | downstream | 221795 | 39231698 ~ 39232206 (+) |
| G1546707 | NA | non-coding | downstream | 250369 | 39260272 ~ 39260791 (+) |
| G1546717 | LOC106588422 | non-coding | downstream | 280279 | 39290182 ~ 39290983 (+) |
| G1546713 | LOC106569985 | non-coding | downstream | 348508 | 39358411 ~ 39372481 (+) |
| LOC110496176 | LOC106588451 | other | upstream | 315645 | 38677975 ~ 38696088 (+) |
| G1545533 | LOC104965079 | other | upstream | 330910 | 38675027 ~ 38676004 (+) |
| LOC110496158 | LOC106588463 | other | upstream | 802459 | 38193174 ~ 38204538 (+) |
| G1544455 | NA | other | upstream | 1950427 | 37055983 ~ 37056487 (+) |
| G1544137 | NA | other | upstream | 2143731 | 36862923 ~ 36863183 (+) |
| G1546605 | LOC106588434 | other | downstream | 106585 | 39116488 ~ 39120019 (+) |
| G1546641 | NA | other | downstream | 123216 | 39133119 ~ 39146252 (+) |
| G1546817 | LOC106588418 | other | downstream | 457551 | 39467454 ~ 39469365 (+) |
| G1547334 | LOC107666349 | other | downstream | 751310 | 39761213 ~ 39761503 (+) |
