Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110496193 |
| gene name | LOC106588432 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39195633 ~ 39203114 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: glyceraldehyde-3-phosphate dehydrogenase-like |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0006006 | glucose metabolic process | biological_process |
| GO:0050661 | NADP binding | molecular_function |
| GO:0051287 | NAD binding | molecular_function |
| GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | molecular_function |
| id | description |
|---|---|
| K00134 | GAPDH, gapA; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021571946.2 | True | 1329 | mRNA | 0.53 | 12 | 39195633 | 39203114 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496191 | LOC106588431 | coding | upstream | 8005 | 39181006 ~ 39187628 (+) |
| LOC110496189 | LOC106588436 | coding | upstream | 83153 | 39084396 ~ 39112480 (+) |
| LOC110496185 | LOC106588438 | coding | upstream | 130597 | 39053727 ~ 39065036 (+) |
| LOC110496187 | LOC106588439 | coding | upstream | 141989 | 39029457 ~ 39053644 (+) |
| LOC110496930 | LOC106588286 | coding | upstream | 185730 | 39006914 ~ 39009903 (+) |
| LOC110496194 | LOC106588429 | coding | downstream | 5095 | 39208209 ~ 39218208 (+) |
| LOC110496196 | LOC106588428 | coding | downstream | 18201 | 39221315 ~ 39229921 (+) |
| LOC110496201 | LOC106588424 | coding | downstream | 123723 | 39326837 ~ 39357124 (+) |
| LOC118940977 | NA | coding | downstream | 382756 | 39585870 ~ 39586862 (+) |
| LOC118941156 | ssl-2 | coding | downstream | 416605 | 39619719 ~ 39622185 (+) |
| G1545688 | NA | non-coding | upstream | 175473 | 39014889 ~ 39020160 (+) |
| G1545667 | NA | non-coding | upstream | 229795 | 38960505 ~ 38965838 (+) |
| LOC110496814 | LOC106570002 | non-coding | upstream | 259908 | 38902212 ~ 38935725 (+) |
| G1545598 | NA | non-coding | upstream | 365943 | 38829232 ~ 38829690 (+) |
| G1545597 | NA | non-coding | upstream | 366952 | 38828471 ~ 38828681 (+) |
| G1546672 | NA | non-coding | downstream | 28584 | 39231698 ~ 39232206 (+) |
| G1546707 | NA | non-coding | downstream | 57158 | 39260272 ~ 39260791 (+) |
| G1546717 | LOC106588422 | non-coding | downstream | 87068 | 39290182 ~ 39290983 (+) |
| G1546713 | LOC106569985 | non-coding | downstream | 155297 | 39358411 ~ 39372481 (+) |
| G1546759 | NA | non-coding | downstream | 171567 | 39374681 ~ 39384881 (+) |
| G1546641 | NA | other | upstream | 49381 | 39133119 ~ 39146252 (+) |
| G1546605 | LOC106588434 | other | upstream | 75614 | 39116488 ~ 39120019 (+) |
| LOC110496176 | LOC106588451 | other | upstream | 504364 | 38677975 ~ 38696088 (+) |
| G1545533 | LOC104965079 | other | upstream | 519629 | 38675027 ~ 38676004 (+) |
| LOC110496158 | LOC106588463 | other | upstream | 991178 | 38193174 ~ 38204538 (+) |
| G1546817 | LOC106588418 | other | downstream | 264340 | 39467454 ~ 39469365 (+) |
| G1547334 | LOC107666349 | other | downstream | 558099 | 39761213 ~ 39761503 (+) |
| G1547652 | LOC106588410 | other | downstream | 832403 | 40035517 ~ 40040594 (+) |
| LOC110496221 | LOC106588406 | other | downstream | 902881 | 40103731 ~ 40110006 (+) |
