LOC110496201 (LOC106588424)


Basic Information

Item Value
gene id LOC110496201
gene name LOC106588424
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 39326837 ~ 39357124 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571960.2
CGTATCAATCCAACACAGGCGTTGTCACATCCGGGGTTCATACACATGATCACTGTGAAGGAGGCGTTTCATTCAACACAGCCTCCAATATTCTTGAGGTTCATCTGTGGCTCATCATATGGCATTTACCCTAGGATTCAAACCGGCAAGCCTTCGGGTACTGGCCCGACTTTCTAAGCTTGAGGCTACCCATGCCAACCCATACAGGATTGCTGACATACAGGGACGCTACATTAGGTTGGACTCTCTCAGGCAGCAATGGGAAGATGACCACAAGAGGGCACTGAAGTATGGGAAGCTGTGTGGTAGCAGCAAATGgaTGTCGATTGTCAGCATCGTTGCGAGGGAGATCCTAGACTCCCGGGGAAACCCCACTGTGGAGGTGGACCTGTGCACAGAGAAAGgtctTTTCAGGGCTGCAGTGCCCAGTGGAGCGTCCACAGGCATCTATGAGGCTCTAGAGCTGAGGGATGGAGACAAGAGCCGCTACAGGGGCAaagGTGTGCTCAAGGCAGTGGGCCACATCAATGACACTCTGGCTCCTGCTCTCATAGCATCGGGTATCAGTGTTGTGGAGCAGGAGCAACTGGACAACACGATGATTGAAATGGATGGCACAGAGAACAAGTCTCAGTTTGGTGCTAATGCTATCCTGGGAGTCTCCCTGGCCATTTGCAAGGCTGGTGCAGCAGAAAAAGAGGTCCCCCTGTACCGTCACATCGCTGACCTGGCAGGAAACACAGAGCTGGTGCTGCCAGTTCCAGCGTTCAACGTGATCAACGGAGGCTCCCACGCGGGCAACAAGCTAGCCATGCAGGAGTTCATGGTACTTCCTGTCGGGGCGGAGTCTTTCAGGGACGCGCTTCGGGTGGGCTCCGAGCTGTACCACACGCTCAGGGGGGTGATCCAGGAGAAGTACGGCCAGGACGCTACCAACGTGGGCGACGAGGGGGGGTTCGCCCCCAATATCCTGGAGAACAGTGAGGcgtTGGAGCTGATAAAGACAGCCATCGAGAAAGCGGGCTTCACGGATAAGGTGGTGATCGGGATGGATGTGGCGGCGTCCGAGTTCTACCGCGAGGGGAAGTACGACCTGGACTTCAAGTCTCCTCCGGACTCTGACAGGCACATCAGCGGAGAGGAGCTGTCAGACATCTACCAAGGCTTCGTTAACGACTACCCAGTGGTGTCCATCGAGGACCCGTTTGATCAGGATGACTGGGCCGCCTGGTCCCGCCTCACGGCTTCCGTGGGCATCCAGGTTGTCGGGGACGACCTGACGGTGACCAATCCCAAGAGGATAGAGAAGGCTGCCGAGAAGAGGGCCTGCAACTGCCTACTGCTCAAAGTCAACCAGATCGGCTCTGTCACTGAAGCCATCCAGGCgtGTAAGCTAGCCCAGGCCAATGGCTGGGGGGTGATGGTCAGTCACCGttcaggagagacagaggacactttCATCGCTGACCTGGTGGTGGGGCTCTGCACTGGACagattaaGACAGGAGCCCCATGTAGATCTGAAAGGCTGGCCAAGTACAACCAGCTCATGAGGATTGAGGAGGAGTTGGGGGATCAAGCTCGCTTTGCAGGCTATAACTTCAGAAACCCCACTGCCCtgtgagaccagacagacagacacatcgcCGCCAACCAGATGCACAGTTACTTTGAGACACAAAGACAGATCAAGATATAAAGagaccgaccgacacacacaaACGTGCACATAGAGACACACAAGTGTAGATATGAAGCCTGAAGGGCACCTAAGAAAGACAGGTATGAGCTTCAAAGAGAAAAGGAAACACAACACTGTATACAAAAAAAAGCAACACTCCGACTGATGGCTGACAAGGACACACTAACTACCGGCTGACTGAGAATAAAAAGAACACACGTTGTATTTTGCAAGTTGTTTGCTCTCATTCACCCATGACGACACAAAACTgcgctctccctccttcctcttctccactTTCCTTTCCTGGCTCTGCAGTCATCCCTCATTTTTGTTTCTTGGTTACTTCAAAAGGCTCTCCTGGTGTTGCTATGTTTGCAGGAATTGGCCTGTTCCTCCATGCTTGTCCCCGTTTCCTCTTTGCCTACTTTCCTTTGGTTACCCTGGCAACAGAATTGCTGTGTTGAAAGACAGAACGCCTGTCACGAAAGGACATAtgtgaaataaaatgttaattTTCAGTTTCAACCA
>XM_021571964.2
CATTTAGTGAGTAAATCTTCTACATTTTATCTACCCTCCCGTTTAGTTATATAATAAAATCTAGAGAGCCAAAGAGAGAGACATCCTCCAAAGAGACTACATACATTGTCCTTGGCAAGTACCCTAGGATTCAAACCGGCAAGCCTTCGGGTACTGGCCCGACTTTCTAAGCTTGAGGCTACCCATGCCAACCCATACAGGATTGCTGACATACAGGGACGCTACATTAGGTTGGACTCTCTCAGGCAGCAATGGGAAGATGACCACAAGAGGGCACTGAAGTATGGGAAGCTGTGTGGTAGCAGCAAATGgaTGTCGATTGTCAGCATCGTTGCGAGGGAGATCCTAGACTCCCGGGGAAACCCCACTGTGGAGGTGGACCTGTGCACAGAGAAAGgtctTTTCAGGGCTGCAGTGCCCAGTGGAGCGTCCACAGGCATCTATGAGGCTCTAGAGCTGAGGGATGGAGACAAGAGCCGCTACAGGGGCAaagGTGTGCTCAAGGCAGTGGGCCACATCAATGACACTCTGGCTCCTGCTCTCATAGCATCGGGTATCAGTGTTGTGGAGCAGGAGCAACTGGACAACACGATGATTGAAATGGATGGCACAGAGAACAAGTCTCAGTTTGGTGCTAATGCTATCCTGGGAGTCTCCCTGGCCATTTGCAAGGCTGGTGCAGCAGAAAAAGAGGTCCCCCTGTACCGTCACATCGCTGACCTGGCAGGAAACACAGAGCTGGTGCTGCCAGTTCCAGCGTTCAACGTGATCAACGGAGGCTCCCACGCGGGCAACAAGCTAGCCATGCAGGAGTTCATGGTACTTCCTGTCGGGGCGGAGTCTTTCAGGGACGCGCTTCGGGTGGGCTCCGAGCTGTACCACACGCTCAGGGGGGTGATCCAGGAGAAGTACGGCCAGGACGCTACCAACGTGGGCGACGAGGGGGGGTTCGCCCCCAATATCCTGGAGAACAGTGAGGcgtTGGAGCTGATAAAGACAGCCATCGAGAAAGCGGGCTTCACGGATAAGGTGGTGATCGGGATGGATGTGGCGGCGTCCGAGTTCTACCGCGAGGGGAAGTACGACCTGGACTTCAAGTCTCCTCCGGACTCTGACAGGCACATCAGCGGAGAGGAGCTGTCAGACATCTACCAAGGCTTCGTTAACGACTACCCAGTGGTGTCCATCGAGGACCCGTTTGATCAGGATGACTGGGCCGCCTGGTCCCGCCTCACGGCTTCCGTGGGCATCCAGGTTGTCGGGGACGACCTGACGGTGACCAATCCCAAGAGGATAGAGAAGGCTGCCGAGAAGAGGGCCTGCAACTGCCTACTGCTCAAAGTCAACCAGATCGGCTCTGTCACTGAAGCCATCCAGGCgtGTAAGCTAGCCCAGGCCAATGGCTGGGGGGTGATGGTCAGTCACCGttcaggagagacagaggacactttCATCGCTGACCTGGTGGTGGGGCTCTGCACTGGACagattaaGACAGGAGCCCCATGTAGATCTGAAAGGCTGGCCAAGTACAACCAGCTCATGAGGATTGAGGAGGAGTTGGGGGATCAAGCTCGCTTTGCAGGCTATAACTTCAGAAACCCCACTGCCCtgtgagaccagacagacagacacatcgcCGCCAACCAGATGCACAGTTACTTTGAGACACAAAGACAGATCAAGATATAAAGagaccgaccgacacacacaaACGTGCACATAGAGACACACAAGTGTAGATATGAAGCCTGAAGGGCACCTAAGAAAGACAGGTATGAGCTTCAAAGAGAAAAGGAAACACAACACTGTATACAAAAAAAAGCAACACTCCGACTGATGGCTGACAAGGACACACTAACTACCGGCTGACTGAGAATAAAAAGAACACACGTTGTATTTTGCAAGTTGTTTGCTCTCATTCACCCATGACGACACAAAACTgcgctctccctccttcctcttctccactTTCCTTTCCTGGCTCTGCAGTCATCCCTCATTTTTGTTTCTTGGTTACTTCAAAAGGCTCTCCTGGTGTTGCTATGTTTGCAGGAATTGGCCTGTTCCTCCATGCTTGTCCCCGTTTCCTCTTTGCCTACTTTCCTTTGGTTACCCTGGCAACAGAATTGCTGTGTTGAAAGACAGAACGCCTGTCACGAAAGGACATAtgtgaaataaaatgttaattTTCAGTTTCAACCA
>XM_021571962.2
GTCACACATTTGACCCCCACCCTCTGTtttcctcctctgctctccccctctctctttctcctcctccctctctctgtttctctccctctctcatccgtCTCTCCTGTATTTTCTGGCTTTCCCTATTAGGCGGAAACACACAAACGGCAGgaTGTCGATTGTCAGCATCGTTGCGAGGGAGATCCTAGACTCCCGGGGAAACCCCACTGTGGAGGTGGACCTGTGCACAGAGAAAGgtctTTTCAGGGCTGCAGTGCCCAGTGGAGCGTCCACAGGCATCTATGAGGCTCTAGAGCTGAGGGATGGAGACAAGAGCCGCTACAGGGGCAaagGTGTGCTCAAGGCAGTGGGCCACATCAATGACACTCTGGCTCCTGCTCTCATAGCATCGGGTATCAGTGTTGTGGAGCAGGAGCAACTGGACAACACGATGATTGAAATGGATGGCACAGAGAACAAGTCTCAGTTTGGTGCTAATGCTATCCTGGGAGTCTCCCTGGCCATTTGCAAGGCTGGTGCAGCAGAAAAAGAGGTCCCCCTGTACCGTCACATCGCTGACCTGGCAGGAAACACAGAGCTGGTGCTGCCAGTTCCAGCGTTCAACGTGATCAACGGAGGCTCCCACGCGGGCAACAAGCTAGCCATGCAGGAGTTCATGGTACTTCCTGTCGGGGCGGAGTCTTTCAGGGACGCGCTTCGGGTGGGCTCCGAGCTGTACCACACGCTCAGGGGGGTGATCCAGGAGAAGTACGGCCAGGACGCTACCAACGTGGGCGACGAGGGGGGGTTCGCCCCCAATATCCTGGAGAACAGTGAGGcgtTGGAGCTGATAAAGACAGCCATCGAGAAAGCGGGCTTCACGGATAAGGTGGTGATCGGGATGGATGTGGCGGCGTCCGAGTTCTACCGCGAGGGGAAGTACGACCTGGACTTCAAGTCTCCTCCGGACTCTGACAGGCACATCAGCGGAGAGGAGCTGTCAGACATCTACCAAGGCTTCGTTAACGACTACCCAGTGGTGTCCATCGAGGACCCGTTTGATCAGGATGACTGGGCCGCCTGGTCCCGCCTCACGGCTTCCGTGGGCATCCAGGTTGTCGGGGACGACCTGACGGTGACCAATCCCAAGAGGATAGAGAAGGCTGCCGAGAAGAGGGCCTGCAACTGCCTACTGCTCAAAGTCAACCAGATCGGCTCTGTCACTGAAGCCATCCAGGCgtGTAAGCTAGCCCAGGCCAATGGCTGGGGGGTGATGGTCAGTCACCGttcaggagagacagaggacactttCATCGCTGACCTGGTGGTGGGGCTCTGCACTGGACagattaaGACAGGAGCCCCATGTAGATCTGAAAGGCTGGCCAAGTACAACCAGCTCATGAGGATTGAGGAGGAGTTGGGGGATCAAGCTCGCTTTGCAGGCTATAACTTCAGAAACCCCACTGCCCtgtgagaccagacagacagacacatcgcCGCCAACCAGATGCACAGTTACTTTGAGACACAAAGACAGATCAAGATATAAAGagaccgaccgacacacacaaACGTGCACATAGAGACACACAAGTGTAGATATGAAGCCTGAAGGGCACCTAAGAAAGACAGGTATGAGCTTCAAAGAGAAAAGGAAACACAACACTGTATACAAAAAAAAGCAACACTCCGACTGATGGCTGACAAGGACACACTAACTACCGGCTGACTGAGAATAAAAAGAACACACGTTGTATTTTGCAAGTTGTTTGCTCTCATTCACCCATGACGACACAAAACTgcgctctccctccttcctcttctccactTTCCTTTCCTGGCTCTGCAGTCATCCCTCATTTTTGTTTCTTGGTTACTTCAAAAGGCTCTCCTGGTGTTGCTATGTTTGCAGGAATTGGCCTGTTCCTCCATGCTTGTCCCCGTTTCCTCTTTGCCTACTTTCCTTTGGTTACCCTGGCAACAGAATTGCTGTGTTGAAAGACAGAACGCCTGTCACGAAAGGACATAtgtgaaataaaatgttaattTTCAGTTTCAACCA
>XM_021571961.2
GGCACCATTAAATCACAAGCATTTAAATGAAGAACACAAGGTTAAATACATTCATAGTCGCTGAAAAGTACGGGGCTGAAAGgaTGTCGATTGTCAGCATCGTTGCGAGGGAGATCCTAGACTCCCGGGGAAACCCCACTGTGGAGGTGGACCTGTGCACAGAGAAAGgtctTTTCAGGGCTGCAGTGCCCAGTGGAGCGTCCACAGGCATCTATGAGGCTCTAGAGCTGAGGGATGGAGACAAGAGCCGCTACAGGGGCAaagGTGTGCTCAAGGCAGTGGGCCACATCAATGACACTCTGGCTCCTGCTCTCATAGCATCGGGTATCAGTGTTGTGGAGCAGGAGCAACTGGACAACACGATGATTGAAATGGATGGCACAGAGAACAAGTCTCAGTTTGGTGCTAATGCTATCCTGGGAGTCTCCCTGGCCATTTGCAAGGCTGGTGCAGCAGAAAAAGAGGTCCCCCTGTACCGTCACATCGCTGACCTGGCAGGAAACACAGAGCTGGTGCTGCCAGTTCCAGCGTTCAACGTGATCAACGGAGGCTCCCACGCGGGCAACAAGCTAGCCATGCAGGAGTTCATGGTACTTCCTGTCGGGGCGGAGTCTTTCAGGGACGCGCTTCGGGTGGGCTCCGAGCTGTACCACACGCTCAGGGGGGTGATCCAGGAGAAGTACGGCCAGGACGCTACCAACGTGGGCGACGAGGGGGGGTTCGCCCCCAATATCCTGGAGAACAGTGAGGcgtTGGAGCTGATAAAGACAGCCATCGAGAAAGCGGGCTTCACGGATAAGGTGGTGATCGGGATGGATGTGGCGGCGTCCGAGTTCTACCGCGAGGGGAAGTACGACCTGGACTTCAAGTCTCCTCCGGACTCTGACAGGCACATCAGCGGAGAGGAGCTGTCAGACATCTACCAAGGCTTCGTTAACGACTACCCAGTGGTGTCCATCGAGGACCCGTTTGATCAGGATGACTGGGCCGCCTGGTCCCGCCTCACGGCTTCCGTGGGCATCCAGGTTGTCGGGGACGACCTGACGGTGACCAATCCCAAGAGGATAGAGAAGGCTGCCGAGAAGAGGGCCTGCAACTGCCTACTGCTCAAAGTCAACCAGATCGGCTCTGTCACTGAAGCCATCCAGGCgtGTAAGCTAGCCCAGGCCAATGGCTGGGGGGTGATGGTCAGTCACCGttcaggagagacagaggacactttCATCGCTGACCTGGTGGTGGGGCTCTGCACTGGACagattaaGACAGGAGCCCCATGTAGATCTGAAAGGCTGGCCAAGTACAACCAGCTCATGAGGATTGAGGAGGAGTTGGGGGATCAAGCTCGCTTTGCAGGCTATAACTTCAGAAACCCCACTGCCCtgtgagaccagacagacagacacatcgcCGCCAACCAGATGCACAGTTACTTTGAGACACAAAGACAGATCAAGATATAAAGagaccgaccgacacacacaaACGTGCACATAGAGACACACAAGTGTAGATATGAAGCCTGAAGGGCACCTAAGAAAGACAGGTATGAGCTTCAAAGAGAAAAGGAAACACAACACTGTATACAAAAAAAAGCAACACTCCGACTGATGGCTGACAAGGACACACTAACTACCGGCTGACTGAGAATAAAAAGAACACACGTTGTATTTTGCAAGTTGTTTGCTCTCATTCACCCATGACGACACAAAACTgcgctctccctccttcctcttctccactTTCCTTTCCTGGCTCTGCAGTCATCCCTCATTTTTGTTTCTTGGTTACTTCAAAAGGCTCTCCTGGTGTTGCTATGTTTGCAGGAATTGGCCTGTTCCTCCATGCTTGTCCCCGTTTCCTCTTTGCCTACTTTCCTTTGGTTACCCTGGCAACAGAATTGCTGTGTTGAAAGACAGAACGCCTGTCACGAAAGGACATAtgtgaaataaaatgttaattTTCAGTTTCAACCA

Function

NR:

description
gamma-enolase isoform X2

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0000015 phosphopyruvate hydratase complex cellular_component
GO:0004634 phosphopyruvate hydratase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K01689 ENO, eno; enolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571960.2 False 2212 mRNA 0.53 13 39326837 39357124
XM_021571964.2 False 2205 mRNA 0.52 13 39326959 39357124
XM_021571962.2 False 2044 mRNA 0.53 12 39337594 39357124
XM_021571961.2 True 1976 mRNA 0.53 12 39338736 39357124

Neighbor

gene id symbol gene type direction distance location
LOC110496196 LOC106588428 coding upstream 96916 39221315 ~ 39229921 (+)
LOC110496194 LOC106588429 coding upstream 108629 39208209 ~ 39218208 (+)
LOC110496193 LOC106588432 coding upstream 123723 39195633 ~ 39203114 (+)
LOC110496191 LOC106588431 coding upstream 139209 39181006 ~ 39187628 (+)
LOC110496189 LOC106588436 coding upstream 214357 39084396 ~ 39112480 (+)
LOC118940977 NA coding downstream 228746 39585870 ~ 39586862 (+)
LOC118941156 ssl-2 coding downstream 262595 39619719 ~ 39622185 (+)
LOC110496217 LOC106569969 coding downstream 708136 40065260 ~ 40077268 (+)
kifc1 LOC106588407 coding downstream 738704 40095828 ~ 40101459 (+)
LOC110496221 LOC106588406 coding downstream 746607 40103731 ~ 40110006 (+)
G1546717 LOC106588422 non-coding upstream 35854 39290182 ~ 39290983 (+)
G1546707 NA non-coding upstream 66046 39260272 ~ 39260791 (+)
G1546672 NA non-coding upstream 94631 39231698 ~ 39232206 (+)
G1545688 NA non-coding upstream 306677 39014889 ~ 39020160 (+)
G1545667 NA non-coding upstream 360999 38960505 ~ 38965838 (+)
G1546713 LOC106569985 non-coding downstream 1287 39358411 ~ 39372481 (+)
G1546759 NA non-coding downstream 17557 39374681 ~ 39384881 (+)
G1546769 NA non-coding downstream 29347 39386471 ~ 39386732 (+)
G1546770 NA non-coding downstream 29745 39386869 ~ 39387101 (+)
G1546772 NA non-coding downstream 31565 39388689 ~ 39389005 (+)
G1546641 NA other upstream 180585 39133119 ~ 39146252 (+)
G1546605 LOC106588434 other upstream 206818 39116488 ~ 39120019 (+)
LOC110496176 LOC106588451 other upstream 635568 38677975 ~ 38696088 (+)
G1545533 LOC104965079 other upstream 650833 38675027 ~ 38676004 (+)
LOC110496158 LOC106588463 other upstream 1122382 38193174 ~ 38204538 (+)
G1546817 LOC106588418 other downstream 110330 39467454 ~ 39469365 (+)
G1547334 LOC107666349 other downstream 404089 39761213 ~ 39761503 (+)
G1547652 LOC106588410 other downstream 678393 40035517 ~ 40040594 (+)

Expression


Co-expression Network