pvrl2l (LOC106588412)


Basic Information

Item Value
gene id pvrl2l
gene name LOC106588412
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 39933644 ~ 40019541 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952772.1
ACTCAGAATGCGTGCGAATGCTTAGTGGAGATAACCGACACACAGAACATGAGTGTTACTTTTTTCTGGTGCCATTTAGCGAACACCAGAGACATACCTGTACGCACTACGTCCGCCCCAGACGGGGAGGGGTTTTGAATGTTTTTGTGTGACTGTCAAGTCGACTCTAATTTGAAATCGAGAAAATAAGACGTCGGACTGAAGATCAAACCTATAGTTTACGGACTCCGGTCTGTTTTGCGGTCTAGTTCCTATTATATATTTGTATTGAGAAGCAATCAGTCAAGGAATATTAAGTCTGTTGTGGTGTGGTGCTGGGGATTTTATATCCACCTCGTCTTTTTAGAAGAATGGCGAGAGACGCTAAACATTGCCCCCTATCACCAATGAAAAACAGTTTGTTGGTGACAGCAGGGATACTTCTGATTATTCAAGcTGCTTCGTGTCAGCGGGTGAGGGTGGTACCAGAGGTGGAGGCGTACCCCACCGAGTCGGTCGACCTGCGCTGTCAGTTTGTCGACGGAGGAAACACCAAGCTCACACAGGTGTCGTGGATATGGGAGCCCACGGAGGGCCAGAGGGACAACATTGCCGTCTTTCACCCCATATACGGCGAGAGCTTCCCCGAATCGCCCTTCAACGGGCGTGTCCGCTTCATCCAAGGCACCTTGACAAACCCCTCCATTACCATCAGCAGCCTCAAGATGGCCGACGCCGGGCGTTACACCTGCGAGTACGCCACTTACCCCAGCGGCAATGAGCAAGGCACCACCAATCTGGTCATACTTGCGAAACCCAAGAATTCTGCATCCCCCGTTGTCGTCCAAGCCAGCACAAGCGGCAAACCAGTGGTCGTGGCCCAGTGTGAGGCGGCTGACGGCAAGCCAGCAGCCAGCATCAAGTGGATGGGAGAAGTCGGTGGCACCGATAACACCACCTCCAAAAAAGGTCTGGACGGCACGGTGACGGTGAGGAGCGTGTACCTACTGGTGCCCACGCCTGAGGACAACGGCAAGGAGGTCACCTGCATGATCAGCCAGCGCACTCAGGACAAGCCGCAGACCTTCCCCATGAAGCTGTCTGTCGAGTATCCCCCGACTGTGTCCATAGTGGGCTATGATAACAACTGGTACATTGGCCGGACCGACGCTGTCCTGACCTGCCAGGCCACGGGCAACCCTGCCCCCGCCAACGTCACTTGGACAGCcatgtccGGTCGGATGCCTGACACGGTACAGATCGCCGACAACAAGCTGATCGTGCGGAAGGTGGACGAGGCTGTGAACACCACCTTTGTCTGCGAGGTGAAGAACCGGCTGGGAGTGAGCAAGCACCAGGTCACCACGGTGGTCATCGAGCAGCGAAAGAAAACAGCAGGGCCGTCGACGGCTGGCATTATCGGAGGCATCATTGGTGTGGTCCTCTTGCTGGCGATCGTGGGCGCTGCCATCGTGCTGGTCCGCAAACGCAAGCAGAACGCAGAGAACGGAGATGGTCCTCCCAAGCACAAGCCCCCTCCGCCTGTGAAGACCGGCAGCTCCACAGAGATGCTGAACAAGCATGTCACGGACCCAGTGACGAAGGAGTTGACGGAGACCCAGCCTTTAAGTAAGGTCTACTACGAGACCAGCGGAGAGCCTGTCACGGATCTGGATGCCTGCGACGATGACGATGACAACGCTGCCGGCGGTGGGGCTGCTAATGGCGGCGGCCCTGCTGTCCTGGAGGGCTCGATACGGTATGCCGATGTCGACGACACGCTAAATGACGGAGCCCTGCCTCCGTACTCCGGCGCGGGCGGTCACCACGTTGATGAGCCGCCGTCGACCACTGTGGCCCGCGGAGAAAGCTTTGTGTCGGCAGCCATGTATGTTTAGCAGATGACGTTTTAGCCTCCGTGACGACGACAACAACAACGTGCCTGTAGACCCAGGAAGGCTCTGGACCGATCCAGCCTCCCGATGTGATCAGAACCTAAATGCAGTGTTTACTACTCTTGTGATTCCGGAAAGGTAATATCACCAGAAACACAATTCAAAATATCATCAGAATTATCACTCGAAACTGTTTGTTTGAATGTTGCAGtgttatacttaagcaataaggaccAGAgatggtgtggtatatggccaatataccccggctaagggctgttcttctgggtacagcccttagccgtggtatattggccatatactactaacccccgaggtgccttaatgctattataaactggttaccaacgtaattagaactgtggtatacggtctgatataccacagctttcagccaatccgcattcagggcttgaaccacccagtttataatgtacaGTAAGCATCCTCAGACCAAAATGCCGTTTTATGGCAGTATGAACAGAATGAAGTTGTCACTGCTTTATAACATTGCAACATGACAAAGTTTAAGAATCTAACTCATGTTTTGGGTTCAATCTAAATTGCAAGAGCTGGCAATACTACGTTGTTAGGGTAACGAAGTGTGACATCTTTGTTTCCAGCAAAGCACACAATGCAAACACAATTATCAATGAGCgtgcaatcccccccccccccccccccacacacacaggaaagaTGAACATTTAAGTCAAATTAAATTCAAATTATAACGATTGTATTTTCAGTGTCAAAATACCCAGCATATATTGGAAAATACTGCCATTAGTACCAATTTATGTAGATGAAGTGGCTATTATACGCTGTAATATATGCTGTTTATTTTACACGCAGTAAAATATGAATTGAAATCTTTTCTATTTTAGTCTTATTCTTTTATGTACCGAAACACAAATGTGCAAAACATCATTGATGAACAATTATGTGAGACCGTGTCAAGTTGGTCAAAGATGTCAAAGTGAACCAAATTATCAACGAACACTGTAAATAATAATGCTGATTTAATATATTGTCGGTGAAATGTGTAAAATGTCAAAACAAAAAAAGAGTGTAGGTGTTTTCAGAACCTCTATGTATAGGGGTGTCAGTTTCCATGTGAAATTGGGAAAAAAAAGTATACATTTTACTTTAACGGGTATTGAGGTTGTCAGTCACAAGGCTTATGTTTTTAATCTAAAAATGCTGTGGGGATTTTAGCCCTTGTAACTCTGCATGGCATGATCGGTGGCTTGTTTCAATCAGTTGGCTCACTTTCCCCCCAAGGCTACTTACAGACACACCAGGGCTTATACTTTTTGAATGTTGTCGATGTCTTTGCGTTCCTTCATTGTATCGTCTACTTCAAGCACAAACACATGGATGTGGAGCAGCGGGGTGATTTAGGCCGTATAGAAGGCGCACAGCACGACATGAGATAGCTTTTAGCTGATACTAAGTCAGTCAGCATACATGTTCTGTCCAGAGTGCTTACTGCAGGGCGCAATAAACAAAGAGTTGTATGTAACTCTTGCTGAGTAATGGGAACAAAAATCATTGGTTCTGGCCGTTCCAAAGAGCTTGAGTCGCACAATTCCACGAGGGCATTGATCTGTCCGCGTCACCTCAACAGAGGCAAGCGAGGCTATACTCGCTAAGTACATTAGCttgttgaataaaaaaaaaaagacgcaAAGAAAAAGACAACGTGAACAAAAAAGCACATGTAGCTTTGTAAGTAAATAAATAGATACTATGAAACTAATGATTGCTGGACAGATGTAGAAAAAATAGATATGGTATATAGACTGCTAGGTGGGCATATGGACACAGAGAAATAGAACACAGTAGTAACTGCCTACCTCACGGTTCTTTATTCAATCACAGTCAGTGCTCCACTGCGCTATTGTCGTTTTTTTTTATGTGACAATCACTTTGAAAACAACTTTCATTGGCTTTTGGTGGCACTTCGGGTCTCTATGGTGTTTCTTTTAAAGATAATGTCTGCATGCTGCATGGAACTATGGGTAGCTCAACTTCTTCTCTGTGCAAAAAGACTCGTGCCGCCATTTTTGAAAACGTATGACTGTGGGCGGCGGGCTCGCATAAAGTGGTGCAGTGTCAGACAATCACATCTGAATTTTATAGCCCTTACACAGGTCAGAGTTCAAAGGGAAATTAACTGTGCATTTTTTTTAATTTGCTTTTATAAACTGTGATTCCatcttcttatttttttatttattgctTCATATTGCCGTCGGAAATATATTGTACTGTTTTGTGTTTTGCCTATAAAAAGAGCCTCAAAATTTAAGATGTGTTGATATATTGAGTTTAGAAAACGACAATCATTGGGCCCCTTGGGTTTGTTATTATCAGAGACCAATGAGTCAGCATTCTGTTTAGTTCTGTTGTTTTATAGTCAAGGCATCTGATAACGATTTCTCGCTGCAGCATGAGTTGCAGTGTGTGTTTGCCAAGCGCTTTGCCTCCGTCCCGATAGGTTTAATGCCAAAAAATACAAACTGTGAATGTTAGCGATTAACGCTAATCTGAATCCGGTCTTCTTCATTCCCCGCTTGTTTAATGATCTCACATTCATTGTCGCATTTTTTTCCATCACCAAGCCAGATGTGCCTTCGTTACTTTATTTTTTTAGCTTGTTCACTTACACATTTGTTTCTGTCTTAGAAAATAAAtatgagataaaaaaaaatacgAGTTAACCTCTGATTGTGGAAAGCCAAACACTTGatcattgtgatttttttttttttgtaaacatgttcttaattcccccccccccctttaaaaaaatgtcatttgcttttttGAAAACCTATTATATGTTTTAAGGATCATTGTCTTGTCGAATAAAATGTAAACCAAAGGC
>XM_036952771.1
CACTCAGAATGCGTGCGAATGCTTAGTGGAGATAACCGACACACAGAACATGAGTGTTACTTTTTTCTGGTGCCATTTAGCGAACACCAGAGACATACCTGTACGCACTACGTCCGCCCCAGACGGGGAGGGGTTTTGAATGTTTTTGTGTGACTGTCAAGTCGACTCTAATTTGAAATCGAGAAAATAAGACGTCGGACTGAAGATCAAACCTATAGTTTACGGACTCCGGTCTGTTTTGCGGTCTAGTTCCTATTATATATTTGTATTGAGAAGCAATCAGTCAAGGAATATTAAGTCTGTTGTGGTGTGGTGCTGGGGATTTTATATCCACCTCGTCTTTTTAGAAGAATGGCGAGAGACGCTAAACATTGCCCCCTATCACCAATGAAAAACAGTTTGTTGGTGACAGCAGGGATACTTCTGATTATTCAAGcTGCTTCGTGTCAGCGGGTGAGGGTGGTACCAGAGGTGGAGGCGTACCCCACCGAGTCGGTCGACCTGCGCTGTCAGTTTGTCGACGGAGGAAACACCAAGCTCACACAGGTGTCGTGGATATGGGAGCCCACGGAGGGCCAGAGGGACAACATTGCCGTCTTTCACCCCATATACGGCGAGAGCTTCCCCGAATCGCCCTTCAACGGGCGTGTCCGCTTCATCCAAGGCACCTTGACAAACCCCTCCATTACCATCAGCAGCCTCAAGATGGCCGACGCCGGGCGTTACACCTGCGAGTACGCCACTTACCCCAGCGGCAATGAGCAAGGCACCACCAATCTGGTCATACTTGCGAAACCCAAGAATTCTGCATCCCCCGTTGTCGTCCAAGCCAGCACAAGCGGCAAACCAGTGGTCGTGGCCCAGTGTGAGGCGGCTGACGGCAAGCCAGCAGCCAGCATCAAGTGGATGGGAGAAGTCGGTGGCACCGATAACACCACCTCCAAAAAAGGTCTGGACGGCACGGTGACGGTGAGGAGCGTGTACCTACTGGTGCCCACGCCTGAGGACAACGGCAAGGAGGTCACCTGCATGATCAGCCAGCGCACTCAGGACAAGCCGCAGACCTTCCCCATGAAGCTGTCTGTCGAGTATCCCCCGACTGTGTCCATAGTGGGCTATGATAACAACTGGTACATTGGCCGGACCGACGCTGTCCTGACCTGCCAGGCCACGGGCAACCCTGCCCCCGCCAACGTCACTTGGACAGCcatgtccGGTCGGATGCCTGACACGGTACAGATCGCCGACAACAAGCTGATCGTGCGGAAGGTGGACGAGGCTGTGAACACCACCTTTGTCTGCGAGGTGAAGAACCGGCTGGGAGTGAGCAAGCACCAGGTCACCACGGTGGTCATCGAGGCCATAGTGGACCCGTCCAACGCGGGCGTGGTGGCGGGGGCTATCATCGGCAGCCTGCTGGCCCTACTGCTGGTCAGCTCGCTGATTGCTGTGCTGGTGACCCGCAGTCGCCGGCAACGGCGCGGTTACCCCGGCAACGGAGAGCCTGGCGCCTACGGGAACAAAGCCCGCCTCTTCGGCGGAGCTGGCAACAAGAACGAAGGCACGGGGGCCAACATCAACGGGCCCATCTATACGTACCGCGAGAGTGACCCCGGAGCGCTGGCGGAGAATGTCAACGACTTCCACGGCCCGCCAGGCTCCACTCCCACCGCCCACGACATCCTGCTGAGCAGCGAGATGGACGAGGCGGAGCGCAGGAAATTTGACGCCCTCGACGACAgcctggaggaggaagaggagcgcTACGACAGCTTTAGCGTGGGCATGGTTCCAGCCTATCACATCCACCGGCACAACGAAGAGATGGGAGGGGTCAGCATGTACCTCGACGACGACATGGAGTCACAGCGGGATGGGTCGGTCATCTCCCGGACTGCCATCTACGTCTAGAGAGGGGCGGTCAACCAACAGGGTCCAGGAGGGAGAGCTGAGGACAGGGTGGAGAGTCCACCAACAACCACCCATCCCCCTGCATACTAAATAGACATGCTACGCTTATGGTAATTTTACACAAAAAAATAACTACAGAAACAAAAGGTGTTGAAACTGAACTGTAACTGAGGAACAAGCGGAATGATGACTTGAGTGCGCTGGTCAATGACTCGGCATCTCGATAAGTCAGTCAGTCTACCAAAATAAATTGTAACAATGTAACTCATCTTCAATGCTGCTTACTGCTCCATTTCATCTTAGCAAGTGAAACGTGAAGAGTGACCATGTGACTGCGTTTAGTAGCCCACTAATCCACAGGACTGCAAACACTAAAGACTTTTTCTCGTTAAGGACACGTACCGTTCAATGTCGCCTTCATGGTACAACTTTTAGACGCATTCCTAGACGGTCACACTCGTTCTATAACCACGGCTACTGCTCGAAGACGTCCTCCAGCGGACCGCCGTGCGGAGGACGAGGAACCGAGCTGTAACTTGTTGTCTTCGTGTGCATCATCACAGGCGTTCCATAGCACAGTGTTACGTACAAATTGTATTTTGTATTATCAAGATGTTTGGGCCTTCAGGCCTTGTTGAAACCACATTTGGTGTTAATGACTCATATATAATGACTTAGGTAGAGTTTCCTACTTCCAtttccttctttcttttttttctctcttcattATTTTCTTTTACATATGGGAGGCCAGCGACGTGGTAGACCGAGCTGGAGCTGGGGTTTGGATGAGAGAAATAGTGCGACCAGATCTGTTTGTTTTTCCAACTGTCTGTTGGCGGTTCATGTTGGTGGAACGTCACTGCTGGAGCGAAGGGCAGCGGGGTCAGCTGGCACCATCCCAGGGTATTGGGCCCAGTGCCAGGCTGTACTGGCCTTCCACGCTGAGGGACCAGCCAGCTCCTGTAATGATCGGAGCCACGTCTAGTCTGCCTAGCGATAGCATAAGACAGATCGACATGCACACCCAGCTCTAACTGAACCTCTTGCTCTGCCTGTCAGTTTGACCAATTAAAAAACAAAAAGGAAGCGGACTCCATTTCCCCGGCAAGTCAATAAACGCGCCGTCTATTTAATGGTAAAGAAATGTTTCGCCGCTGATGCTCGAGGGACCGGAGGCGGAATATTTCcctcgttttttattttttttataccagAACAAACTGTTCCTAGCCCACATGTTTAATTCAGGAGTAGAAGAAGCATAAAAGTGTTGCGCATTATCTTATGTAGAGGTATAGAGCGAGAGAGGCTGATTTCTGGCTGGTATTGAGCGCTTttgcgattttttttttttaatgcagatAAGCCCAAGCATTAATAATAAGACAAGCCGCACATACGGCTGAAATTGCGAAGCTTCACTCCCGAACACAGTAGGAGTTATGAAGTGTTATGAGGTCGACCGTCAACGATCGATTAATCTACTTCAAAATACAGTATTATCATTATTTTAGCGGGGCGAAATGCTGAGTCGAGTTGTTTTTTTGCTGTATGTTAATGGGCAAATCTCTGCCGGGCCTTCTAAAGGGGGGCAGTAAACACACAAAATACGCCTGTGACTGTGTGTGGGGATATTTCTGACCATGTGCGAGGCCCATTAGTTCTAAGCCTGGCTGGCATATGTGTTTTTCGAGTTCTGAGTTGACCGAATTTGAATCGCTGCCAGACTTGGAACGAGGTTAAGGGGCTAACCCCACCCGCAGTATGTTCCACTGTCAGATTGCCGCAGTTCACTTTAACGTAGtggcctagtgtgtgtgtgtgtgtgtgtgtgtattgtgcaaGGGTGTATGTAGCGTGATTGTACAGATTTGAGTTGTGTATATCCCACATGCTGATTCATCGCGCAATAGCCCAATGTTATGCAGGAGGAGTTTTGCATAATGTCATACATATGGATGGCTAAGCCTATCTCTGAGTCATTCATCAGTCATTTCATGCACAGTAACCTCACTGATGAAGGGGTTGGAGGACCGTGATAGGAAACTGCTTAGCACGGGGACCCGCGTGGACATGAATATTACACTGGCGGAGCCGGGATGAAGCCGGACTGGCTCAAAGGGCCTTTGGAGTGGTCTCCTGTGCCACCCCGGCCAGATGGAAACTTGATTGGGTATTGGCGTCCGGGCCGTTGCTCTGTAAATATTGTGACCCATTCCCCCTCCTTTGCTTTTTCTTATCACAgatagaggtcgactgattatgatttttcaacggcgataccaaattattggaggacc

Function

NR:

description
poliovirus receptor-like

GO: NA

KEGG:

id description
K06539 PVR, NECL5, CD155; poliovirus receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952772.1 False 4788 mRNA 0.46 10 39933644 40019540
XM_036952771.1 True 4214 mRNA 0.51 7 39974235 40019541

Neighbor

gene id symbol gene type direction distance location
atp1a3a LOC106588414 coding downstream 36308 39864987 ~ 39897336 (-)
LOC110496210 LOC106588415 coding downstream 108556 39755539 ~ 39825088 (-)
LOC110496209 LOC106588416 coding downstream 210108 39697624 ~ 39723536 (-)
LOC110496816 LOC106588265 coding downstream 244894 39642841 ~ 39688750 (-)
LOC110496208 LOC106588417 coding downstream 291841 39625771 ~ 39641803 (-)
LOC110496213 LOC106588411 coding upstream 10109 40029650 ~ 40034564 (-)
LOC110496214 LOC106588410 coding upstream 19002 40038543 ~ 40048437 (-)
LOC110496215 tbb5 coding upstream 36853 40056394 ~ 40063549 (-)
LOC110496218 LOC106588408 coding upstream 60674 40080215 ~ 40093772 (-)
LOC110496219 NA coding upstream 67703 40087244 ~ 40087790 (-)
G1547609 NA non-coding downstream 8651 39924639 ~ 39924993 (-)
G1547561 NA non-coding downstream 75781 39857659 ~ 39857863 (-)
G1547558 NA non-coding downstream 77323 39856095 ~ 39856321 (-)
G1547550 NA non-coding downstream 95859 39837521 ~ 39837785 (-)
G1547537 NA non-coding downstream 126419 39807019 ~ 39807225 (-)
G1548257 NA non-coding upstream 2247 40021788 ~ 40021998 (-)
G1548260 NA non-coding upstream 5695 40025236 ~ 40025442 (-)
G1548270 NA non-coding upstream 33834 40053375 ~ 40053601 (-)
G1548317 NA non-coding upstream 135297 40154838 ~ 40169209 (-)
G1546396 LOC106588446 other downstream 1145843 38776284 ~ 38787801 (-)
G1546385 LOC106588448 other downstream 1159960 38768097 ~ 38773684 (-)
LOC110496175 LOC104924380 other downstream 1257615 38674378 ~ 38676029 (-)
G1548367 NA other upstream 366429 40385970 ~ 40391883 (-)
G1548517 NA other upstream 620634 40640175 ~ 40685641 (-)
LOC118941164 LOC106588367 other upstream 886146 40902519 ~ 40908744 (-)
LOC110496277 LOC106588347 other upstream 1643895 41663436 ~ 41671516 (-)
G1550177 LOC106569881 other upstream 2295745 42315286 ~ 42316079 (-)

Expression


Co-expression Network