kifc1 (LOC106588407)


Basic Information

Item Value
gene id kifc1
gene name LOC106588407
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 40095828 ~ 40101459 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952776.1
TTCCTATAACGCGATTGGGCTAAGGTCAGCCAATTACGTTGGACGGTGTAAAGCGCCATCAAAACATTTCAATTTGAAATTCAAACGGCTGTTGTGTTTGCAGCGAAACGAGTGTGAATGCCCGTATTGGTACACATTCAAGCCATATGAATAAAGAGAATCACTCCCGACTACCAGTCATGTCTGGTAAAAGGGTCCTCTCCGCTAGCAGCAGTGAGAGTATAAACTCCTGCTCAGACCAACAACCTGCTCAGAAAAAGATGAGAAGGGTTGATTCAGACCCAaagatgagacagacagcaagtGCGACGGGAACAAAGTGGCCCCTTCCACCAAAGCGCGCTGTTGCAGCCAAATTGATTCGGCATACAGGAGCAGCCACTATAGCTGCTGGTCCCTCTAGAGGGTTTCAGAAGCCGCCCATTGCCTCTGTTGCTAAAGCAGCACCAATAGCAGCTGTTGGGGGTTCACGGCGGCCTGCATGGGACCTGAAGGGAAAAGTTACGGACATGGAGGGCAAGATTTCCAATTACCAGAGAAAAGTCAAAACGGTGGCCCAGGAGAACGAGAGCCTGAAGGAGTCTGTAGCTAAAAGCAGGCAGAAGGAAGCACAGATGACTTCAGACCTACAAGAACTCCACACACAGCTCAGCCAGTATGAACTGGAGCTGGCTGCCCTGTCTGGTGTCAAAGAGCAGCTGGCCATTGTGTCCAGTGAGAAGGCCTCCCTGGAGAAGAACTTATGCAACCTCACCGATGAGCACAAAGTTCTTCTGGGCTTGAGGGAGAGTCTGGAGGCTGAGCTTCACAGTGTGCAGACCCAGCTCTCTGTGCAGGCCTCCACTCTCTCCCGTTGCCAGACCACCCTGAGGGAGACCCAGGACACTGTCCGCAACTTGGAGGAGACTGTGGCCCGCCAGACAGACGAGATTCACTGTGGAGAGATGGAGCGCAGGGAGCTTCACAACACAATCCAAGAGCTCAAGGGAAACATCAGAGTTTTCTGCAGAGTGCGCCCCCTGCAGGCCGGTGGGCAGAGTGACCATATTCAGCTCCCGGCCCACGACAACCAGGCTCTCACACTGGCCAAGACTGAAGAGTCTCACATAGGGCGCTCTGGAGACACCCAAAAGAGCTACAACTTCAGCTTTGACCGGGTGTTTGGGCCCTCCATCCCGCAGAAGGATGTGTTTGAGGAGATATCCCTCCTTGTGCAGTCAGCCCTGGACGGCTACAACGTCTGCTGCTTCGCGTACGGCCAGACGGGCAGTGGCAAAACCTACACCATGGAGggtggtgagatggaggacatGCGTGGGGTCATCCCCCGGGCTGTGCAGCAGATCTTCCAGGCCTCCAAGAAACTGCGGGAGCAGGGATGGAAGTTTACATTTACTGCCAGTTTCGTTGAGATCTACAACGAAACTCTGCGTGATCTCCTCTACACTGGAAAGGCCAACAAGAGACCGGAGCATGAGATTCGCAAAAGCGCCAACAACGAGGTCACTGTCACCAATCTGACCTACCAGAAGGTCAACTCTGAGGATGAGGTCTGTAACCTGATTGCACTGGCCAACCAGAACCGATCCACAGCCCGGACCAACATGAACGACCACTCCTCCCGCTCGCACTCGGTGTTCCAgcttgacattgagggagagaacTCTGGGAGAGATGTCAAGTGCAAATcctctctgtgtttggTGGACCTGGCTGGCAGCGAGCGGGTGCAGAAGAGCCAATCCCAAGGGGACCGCTTCAAGGAGATGACGGCCATCAACGGCTCCTTGACCAACCTTGGGATTGTTATCGCTGCTTTGGCTAATAAGGAGAGCTATATCCCGTACAGAAACTCAAAGCTGACGTATCTTCTCCAAAGCTGCCTCGGAGGAAACAGCAAGACCTTGATGTTTGTCAACATTTCCCCAGAGGCAGACAGCTTCCCAGAGACCCTGAACTCTCTGCGGTTTGCTAGCAAGGTGAATGATTGTGTTATTGGCACAGCATCAGCTAACCGGAAGTAAATGTGCATCCTGTGGAGAGAAATTAATGTGGTGTCTGTACATTGTGGTTTTTAGACATATGCCCTTGTATTAGTGGTTATTTTATATTATTCATTTTTAATCAATTGGATCAGAGATACAACAGTCAAAAGCTCTTTTTGTTTTTAAGTCTTTGTCTTGTAGTTAATAATCATAGATGGATGTTGTCAGTAGTGCAGGGAAaacagtttacccaccttttttGTTTGCCCAACCATTTACCCACAGTTTGCTGAAAAATTCTGTTTTGagtataaaaataatattttcatTTTAATAAAGCTACATACAAA
>XM_036952777.1
TTCCTATAACGCGATTGGGCTAAGGTCAGCCAATTACGTTGGACGGTGTAAAGCGCCATCAAAACATTTCAATTTGAAATTCAAACGGCTGTTGTGTTTGCAGCGAAACGAGTGTGAATGCCCGTATTGGTACACATTCAAGCCATATGAATAAAGAGAATCACTCCCGACTACCAGTCATGTCTGGTAAAAGGGTCCTCTCCGCTAGCAGCAGTGAGAGTATAAACTCCTGCTCAGACCAACAACCTGCTCAGAAAAAGATGAGAAGGGTTGATTCAGACCCAaagatgagacagacagcaagtGCGACGGGAACAAAGTGGCCCCTTCCACCAAAGCGCGCTGTTGCCAAATTGATTCGGCATACAGGAGCAGCCACTATAGCTGCTGGTCCCTCTAGAGGGTTTCAGAAGCCGCCCATTGCCTCTGTTGCTAAAGCAGCACCAATAGCAGCTGTTGGGGGTTCACGGCGGCCTGCATGGGACCTGAAGGGAAAAGTTACGGACATGGAGGGCAAGATTTCCAATTACCAGAGAAAAGTCAAAACGGTGGCCCAGGAGAACGAGAGCCTGAAGGAGTCTGTAGCTAAAAGCAGGCAGAAGGAAGCACAGATGACTTCAGACCTACAAGAACTCCACACACAGCTCAGCCAGTATGAACTGGAGCTGGCTGCCCTGTCTGGTGTCAAAGAGCAGCTGGCCATTGTGTCCAGTGAGAAGGCCTCCCTGGAGAAGAACTTATGCAACCTCACCGATGAGCACAAAGTTCTTCTGGGCTTGAGGGAGAGTCTGGAGGCTGAGCTTCACAGTGTGCAGACCCAGCTCTCTGTGCAGGCCTCCACTCTCTCCCGTTGCCAGACCACCCTGAGGGAGACCCAGGACACTGTCCGCAACTTGGAGGAGACTGTGGCCCGCCAGACAGACGAGATTCACTGTGGAGAGATGGAGCGCAGGGAGCTTCACAACACAATCCAAGAGCTCAAGGGAAACATCAGAGTTTTCTGCAGAGTGCGCCCCCTGCAGGCCGGTGGGCAGAGTGACCATATTCAGCTCCCGGCCCACGACAACCAGGCTCTCACACTGGCCAAGACTGAAGAGTCTCACATAGGGCGCTCTGGAGACACCCAAAAGAGCTACAACTTCAGCTTTGACCGGGTGTTTGGGCCCTCCATCCCGCAGAAGGATGTGTTTGAGGAGATATCCCTCCTTGTGCAGTCAGCCCTGGACGGCTACAACGTCTGCTGCTTCGCGTACGGCCAGACGGGCAGTGGCAAAACCTACACCATGGAGggtggtgagatggaggacatGCGTGGGGTCATCCCCCGGGCTGTGCAGCAGATCTTCCAGGCCTCCAAGAAACTGCGGGAGCAGGGATGGAAGTTTACATTTACTGCCAGTTTCGTTGAGATCTACAACGAAACTCTGCGTGATCTCCTCTACACTGGAAAGGCCAACAAGAGACCGGAGCATGAGATTCGCAAAAGCGCCAACAACGAGGTCACTGTCACCAATCTGACCTACCAGAAGGTCAACTCTGAGGATGAGGTCTGTAACCTGATTGCACTGGCCAACCAGAACCGATCCACAGCCCGGACCAACATGAACGACCACTCCTCCCGCTCGCACTCGGTGTTCCAgcttgacattgagggagagaacTCTGGGAGAGATGTCAAGTGCAAATcctctctgtgtttggTGGACCTGGCTGGCAGCGAGCGGGTGCAGAAGAGCCAATCCCAAGGGGACCGCTTCAAGGAGATGACGGCCATCAACGGCTCCTTGACCAACCTTGGGATTGTTATCGCTGCTTTGGCTAATAAGGAGAGCTATATCCCGTACAGAAACTCAAAGCTGACGTATCTTCTCCAAAGCTGCCTCGGAGGAAACAGCAAGACCTTGATGTTTGTCAACATTTCCCCAGAGGCAGACAGCTTCCCAGAGACCCTGAACTCTCTGCGGTTTGCTAGCAAGGTGAATGATTGTGTTATTGGCACAGCATCAGCTAACCGGAAGTAAATGTGCATCCTGTGGAGAGAAATTAATGTGGTGTCTGTACATTGTGGTTTTTAGACATATGCCCTTGTATTAGTGGTTATTTTATATTATTCATTTTTAATCAATTGGATCAGAGATACAACAGTCAAAAGCTCTTTTTGTTTTTAAGTCTTTGTCTTGTAGTTAATAATCATAGATGGATGTTGTCAGTAGTGCAGGGAAaacagtttacccaccttttttGTTTGCCCAACCATTTACCCACAGTTTGCTGAAAAATTCTGTTTTGagtataaaaataatattttcatTTTAATAAAGCTACATACAAA
>XM_036952778.1
tagccagctaaccatCAACCTAACAATCACTCCCGACTACCAGTCATGTCTGGTAAAAGGGTCCTCTCCGCTAGCAGCAGTGAGAGTATAAACTCCTGCTCAGACCAACAACCTGCTCAGAAAAAGATGAGAAGGGTTGATTCAGACCCAaagatgagacagacagcaagtGCGACGGGAACAAAGTGGCCCCTTCCACCAAAGCGCGCTGTTGCAGCCAAATTGATTCGGCATACAGGAGCAGCCACTATAGCTGCTGGTCCCTCTAGAGGGTTTCAGAAGCCGCCCATTGCCTCTGTTGCTAAAGCAGCACCAATAGCAGCTGTTGGGGGTTCACGGCGGCCTGCATGGGACCTGAAGGGAAAAGTTACGGACATGGAGGGCAAGATTTCCAATTACCAGAGAAAAGTCAAAACGGTGGCCCAGGAGAACGAGAGCCTGAAGGAGTCTGTAGCTAAAAGCAGGCAGAAGGAAGCACAGATGACTTCAGACCTACAAGAACTCCACACACAGCTCAGCCAGTATGAACTGGAGCTGGCTGCCCTGTCTGGTGTCAAAGAGCAGCTGGCCATTGTGTCCAGTGAGAAGGCCTCCCTGGAGAAGAACTTATGCAACCTCACCGATGAGCACAAAGTTCTTCTGGGCTTGAGGGAGAGTCTGGAGGCTGAGCTTCACAGTGTGCAGACCCAGCTCTCTGTGCAGGCCTCCACTCTCTCCCGTTGCCAGACCACCCTGAGGGAGACCCAGGACACTGTCCGCAACTTGGAGGAGACTGTGGCCCGCCAGACAGACGAGATTCACTGTGGAGAGATGGAGCGCAGGGAGCTTCACAACACAATCCAAGAGCTCAAGGGAAACATCAGAGTTTTCTGCAGAGTGCGCCCCCTGCAGGCCGGTGGGCAGAGTGACCATATTCAGCTCCCGGCCCACGACAACCAGGCTCTCACACTGGCCAAGACTGAAGAGTCTCACATAGGGCGCTCTGGAGACACCCAAAAGAGCTACAACTTCAGCTTTGACCGGGTGTTTGGGCCCTCCATCCCGCAGAAGGATGTGTTTGAGGAGATATCCCTCCTTGTGCAGTCAGCCCTGGACGGCTACAACGTCTGCTGCTTCGCGTACGGCCAGACGGGCAGTGGCAAAACCTACACCATGGAGggtggtgagatggaggacatGCGTGGGGTCATCCCCCGGGCTGTGCAGCAGATCTTCCAGGCCTCCAAGAAACTGCGGGAGCAGGGATGGAAGTTTACATTTACTGCCAGTTTCGTTGAGATCTACAACGAAACTCTGCGTGATCTCCTCTACACTGGAAAGGCCAACAAGAGACCGGAGCATGAGATTCGCAAAAGCGCCAACAACGAGGTCACTGTCACCAATCTGACCTACCAGAAGGTCAACTCTGAGGATGAGGTCTGTAACCTGATTGCACTGGCCAACCAGAACCGATCCACAGCCCGGACCAACATGAACGACCACTCCTCCCGCTCGCACTCGGTGTTCCAgcttgacattgagggagagaacTCTGGGAGAGATGTCAAGTGCAAATcctctctgtgtttggTGGACCTGGCTGGCAGCGAGCGGGTGCAGAAGAGCCAATCCCAAGGGGACCGCTTCAAGGAGATGACGGCCATCAACGGCTCCTTGACCAACCTTGGGATTGTTATCGCTGCTTTGGCTAATAAGGAGAGCTATATCCCGTACAGAAACTCAAAGCTGACGTATCTTCTCCAAAGCTGCCTCGGAGGAAACAGCAAGACCTTGATGTTTGTCAACATTTCCCCAGAGGCAGACAGCTTCCCAGAGACCCTGAACTCTCTGCGGTTTGCTAGCAAGGTGAATGATTGTGTTATTGGCACAGCATCAGCTAACCGGAAGTAAATGTGCATCCTGTGGAGAGAAATTAATGTGGTGTCTGTACATTGTGGTTTTTAGACATATGCCCTTGTATTAGTGGTTATTTTATATTATTCATTTTTAATCAATTGGATCAGAGATACAACAGTCAAAAGCTCTTTTTGTTTTTAAGTCTTTGTCTTGTAGTTAATAATCATAGATGGATGTTGTCAGTAGTGCAGGGAAaacagtttacccaccttttttGTTTGCCCAACCATTTACCCACAGTTTGCTGAAAAATTCTGTTTTGagtataaaaataatattttcatTTTAATAAAGCTACATACAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K10405 KIFC1; kinesin family member C1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952776.1 False 2335 mRNA 0.50 17 40095828 40101459
XM_036952777.1 False 2332 mRNA 0.50 17 40095828 40101459
XM_036952778.1 True 2201 mRNA 0.51 16 40096346 40101459

Neighbor

gene id symbol gene type direction distance location
LOC110496217 LOC106569969 coding upstream 18560 40065260 ~ 40077268 (+)
LOC118941156 ssl-2 coding upstream 473643 39619719 ~ 39622185 (+)
LOC118940977 NA coding upstream 508966 39585870 ~ 39586862 (+)
LOC110496201 LOC106588424 coding upstream 738704 39326837 ~ 39357124 (+)
LOC110496196 LOC106588428 coding upstream 865907 39221315 ~ 39229921 (+)
LOC110496221 LOC106588406 coding downstream 2272 40103731 ~ 40110006 (+)
LOC110496223 NA coding downstream 28001 40129460 ~ 40142425 (+)
LOC110496224 NA coding downstream 62682 40164141 ~ 40199663 (+)
LOC118941157 NA coding downstream 84781 40186240 ~ 40190407 (+)
psb9 lmp2/d coding downstream 112306 40213765 ~ 40223810 (+)
G1547711 LOC107394864 non-coding upstream 7807 40085957 ~ 40088021 (+)
G1547682 NA non-coding upstream 41402 40054197 ~ 40054426 (+)
G1547588 NA non-coding upstream 189073 39903628 ~ 39906755 (+)
G1547587 NA non-coding upstream 189572 39903222 ~ 39906256 (+)
G1547743 NA non-coding downstream 100450 40201909 ~ 40202458 (+)
G1547745 NA non-coding downstream 102421 40203880 ~ 40204439 (+)
G1547747 NA non-coding downstream 103981 40205440 ~ 40205726 (+)
G1547748 NA non-coding downstream 105312 40206771 ~ 40207040 (+)
G1547652 LOC106588410 other upstream 55234 40035517 ~ 40040594 (+)
G1547334 LOC107666349 other upstream 334325 39761213 ~ 39761503 (+)
G1546817 LOC106588418 other upstream 626463 39467454 ~ 39469365 (+)
G1546713 LOC106569985 other upstream 723347 39358411 ~ 39372481 (+)
G1546641 NA other upstream 949576 39133119 ~ 39146252 (+)
G1547788 NA other downstream 225016 40326475 ~ 40327181 (+)
G1547817 NA other downstream 325649 40427108 ~ 40429520 (+)
G1547834 rps18 other downstream 368910 40469109 ~ 40471582 (+)

Expression


Co-expression Network