Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941159 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40316169 ~ 40318834 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037474.1 | False | 853 | mRNA | 0.43 | 5 | 40316223 | 40318834 |
| TU1771075 | True | 208 | lncRNA | 0.42 | 1 | 40316169 | 40316376 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496233 | brd2 | coding | upstream | 6657 | 40297053 ~ 40309566 (+) |
| psb8 | psb8 | coding | upstream | 58939 | 40249188 ~ 40257284 (+) |
| LOC118941049 | NA | coding | upstream | 77797 | 40236397 ~ 40238426 (+) |
| LOC110496230 | abcb3 | coding | upstream | 81687 | 40228255 ~ 40234536 (+) |
| LOC100135882 | psmb9a | coding | upstream | 88785 | 40224801 ~ 40227438 (+) |
| LOC110496235 | LOC106588392 | coding | downstream | 141639 | 40460473 ~ 40464209 (+) |
| vps52 | vps52 | coding | downstream | 153314 | 40408575 ~ 40517763 (+) |
| LOC110496243 | LOC106588384 | coding | downstream | 169120 | 40487954 ~ 40500744 (+) |
| LOC110496240 | LOC106588375 | coding | downstream | 207051 | 40525885 ~ 40542149 (+) |
| LOC110496237 | LOC105028059 | coding | downstream | 244136 | 40562970 ~ 40601009 (+) |
| G1547773 | NA | non-coding | upstream | 28881 | 40287052 ~ 40287342 (+) |
| G1547771 | NA | non-coding | upstream | 30909 | 40284919 ~ 40285314 (+) |
| G1547770 | NA | non-coding | upstream | 32509 | 40283402 ~ 40283714 (+) |
| G1547761 | NA | non-coding | upstream | 68246 | 40247763 ~ 40247977 (+) |
| G1547760 | NA | non-coding | upstream | 69366 | 40246641 ~ 40246857 (+) |
| G1547697 | LOC106588396 | non-coding | downstream | 3455 | 40322289 ~ 40322867 (+) |
| G1547816 | NA | non-coding | downstream | 73792 | 40392626 ~ 40471675 (+) |
| G1547840 | NA | non-coding | downstream | 95962 | 40414796 ~ 40415849 (+) |
| G1547815 | NA | non-coding | downstream | 98573 | 40417407 ~ 40420396 (+) |
| G1547743 | NA | other | upstream | 113765 | 40201909 ~ 40202458 (+) |
| LOC110496221 | LOC106588406 | other | upstream | 209377 | 40103731 ~ 40110006 (+) |
| G1547652 | LOC106588410 | other | upstream | 275629 | 40035517 ~ 40040594 (+) |
| G1547334 | LOC107666349 | other | upstream | 554720 | 39761213 ~ 39761503 (+) |
| G1546817 | LOC106588418 | other | upstream | 846858 | 39467454 ~ 39469365 (+) |
| G1547788 | NA | other | downstream | 7641 | 40326475 ~ 40327181 (+) |
| G1547817 | NA | other | downstream | 108274 | 40427108 ~ 40429520 (+) |
| G1547834 | rps18 | other | downstream | 151535 | 40469109 ~ 40471582 (+) |
| G1547904 | NA | other | downstream | 389184 | 40708018 ~ 40717744 (+) |
| LOC110496251 | LOC106569933 | other | downstream | 418784 | 40736719 ~ 40738475 (+) |
