Gene
RNA
| Item | Value |
|---|---|
| gene id | rps18 |
| gene name | LOC107726165 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40469109 ~ 40471565 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: 40S ribosomal protein S18-like isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0051726 | regulation of cell cycle | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0042254 | ribosome biogenesis | biological_process |
| GO:0022627 | cytosolic small ribosomal subunit | cellular_component |
| GO:0019843 | rRNA binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02964 | RP-S18e, RPS18; small subunit ribosomal protein S18e |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021572030.2 | False | 634 | mRNA | 0.49 | 6 | 40469109 | 40471496 |
| XM_021572029.1 | True | 616 | mRNA | 0.51 | 6 | 40469109 | 40471565 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496236 | NA | coding | downstream | 13561 | 40445255 ~ 40455548 (-) |
| LOC100136269 | LOC106588393 | coding | downstream | 39636 | 40417575 ~ 40429473 (-) |
| LOC101268904 | LOC106588394 | coding | downstream | 53025 | 40392620 ~ 40416084 (-) |
| LOC110496231 | LOC106569953 | coding | downstream | 99931 | 40319045 ~ 40369178 (-) |
| LOC110496227 | LOC106569958 | coding | downstream | 255329 | 40210284 ~ 40213780 (-) |
| LOC100653472 | LOC100653472 | coding | upstream | 13796 | 40485361 ~ 40487640 (-) |
| LOC118941162 | NA | coding | upstream | 29173 | 40500738 ~ 40501410 (-) |
| LOC118941163 | NA | coding | upstream | 30100 | 40501665 ~ 40503478 (-) |
| LOC110496249 | NA | coding | upstream | 73644 | 40545209 ~ 40553619 (-) |
| LOC118941161 | NA | coding | upstream | 203904 | 40675469 ~ 40678077 (-) |
| G1548439 | NA | non-coding | downstream | 98731 | 40370046 ~ 40370378 (-) |
| G1548418 | NA | non-coding | downstream | 151888 | 40316985 ~ 40317221 (-) |
| G1548417 | NA | non-coding | downstream | 152526 | 40316319 ~ 40316583 (-) |
| G1548413 | NA | non-coding | downstream | 157096 | 40311798 ~ 40312013 (-) |
| G1548508 | NA | non-coding | upstream | 47008 | 40518573 ~ 40518783 (-) |
| G1548520 | NA | non-coding | upstream | 71426 | 40542991 ~ 40543403 (-) |
| G1548521 | NA | non-coding | upstream | 73102 | 40544667 ~ 40544898 (-) |
| G1548525 | NA | non-coding | upstream | 82848 | 40554413 ~ 40554685 (-) |
| G1548540 | LOC106588374 | non-coding | upstream | 108025 | 40579590 ~ 40580803 (-) |
| G1548367 | NA | other | downstream | 77226 | 40385970 ~ 40391883 (-) |
| LOC110496816 | LOC106588265 | other | downstream | 780428 | 39642841 ~ 39688750 (-) |
| LOC110496208 | LOC106588417 | other | downstream | 838011 | 39625771 ~ 39641803 (-) |
| G1546396 | LOC106588446 | other | downstream | 1681308 | 38776284 ~ 38787801 (-) |
| G1546385 | LOC106588448 | other | downstream | 1695425 | 38768097 ~ 38773684 (-) |
| G1548517 | NA | other | upstream | 168610 | 40640175 ~ 40685641 (-) |
| LOC118941164 | LOC106588367 | other | upstream | 434122 | 40902519 ~ 40908744 (-) |
| LOC110496277 | LOC106588347 | other | upstream | 1191871 | 41663436 ~ 41671516 (-) |
| G1550177 | LOC106569881 | other | upstream | 1843721 | 42315286 ~ 42316079 (-) |
| G1550202 | NA | other | upstream | 1887583 | 42359148 ~ 42359628 (-) |
