LOC118941163


Basic Information

Item Value
gene id LOC118941163
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 40501665 ~ 40503478 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037481.1
cgaccagcagagggagacagggtgaagagaaagaacaggaacaagacacaacatgacaatacatgacagttatgttgtgttgtgttgtgtagttgcTTTGATGGCATGCATCATTTTTATACATCTTctgttttgccccaccaagaaTCACATGCTAAAGTTGCCACTGCTTTGGCCTAAGAATCACGGTCggaaggcatatgaactaacaggttatagagcaaacaacgcaatccTCACCACATGTAGGTTGTAATAAGCCTTTTATTTATGGTTTGGCTTCCcaagtgattttacccacgcactgcAACTGTCCTTGAAAGTAATTCAATGAAATTGATGAATGACTTTTAACAAGTATCAAATCCAAATctactttatttgtcacatgcttcgttagcaacaggtgtagacggacagtgaaatgctttcttacgggcccttcccagcaatgtagagagagaaaatagagaaataatagaaaagtaataacacgtaataataaaagtTATAATAAGAGTTCTGGTGAAACATTTGTACGTTTTTTGTGTTTCCTAATGATTCTCCTCACCTCCAGTGTAACAGACACAGGTACAGTGAACATTTTGTTATGTGCATTGAGTACTACACGCACAGCACTTTCTTTCTATCCAAGACAAAATTAACAAAACATAAGAACAGGAAGTAGTAATTCTAGCTACTGGGAAAACCATAGTGTATCAGAATAATTATGAGCAATTTCTATTGATTGCAGATGCTACTTCATGAACACATATATGTGAACAATCATAGTTGCCTATAATCAGTGACAAAGTGTTTCTATCTTCATTGTTCGGGGATATTCAATACATTCTGTTAAAAACACACGTCAGCTTCCTTGAAGCAGGCAAATTGTATTCCCACTCTAAGCATATATCATGTTCGCTTTAGATAAAGAGGAATAGTGGATCACACAGGAAGCAGGACCTAAACTGACTCAGGAAGATATGAGTGACACACAGCCTTGCATGGCAGTTGTAGACAAAAATTGATATTCTCATACATACAGCCACTGTGGAAGTAGACTGCCTTCTCAGGTGATGGCATAGGCTTATGACAAGACAGGCTCTCAGAAAAAAAACCCGATCCAACACATTACCCCACATTTTGAGACTGAATAAATTAGCGTTCTGCTGGCAGAACCCTATTGCTGCCCTGTACAGTATCTAGAAAAGCCAAGCAGAGGTGGTTCTTCAAGAAAGATAGTGAAACATGCAAAAcaggaaaagggagagggaggacccACAGAACAGGTTTTCCTTTGATGAAGATGGAGCCCTGCGGAACCTCAATCTGCAGCCTGGGGACTCTGGAGAGAACCTGTGTAATGGGGAAACGGCAGCTAAAGTAACAGTGTTGACAGATCACCTCAACATCCAGAGTACCACTGCTGTTATGAAAACAGATGTTGTTGGGAGAGATAAGGACCTACAAATG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106569945 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037481.1 True 1476 mRNA 0.40 3 40501665 40503478

Neighbor

gene id symbol gene type direction distance location
LOC118941162 NA coding downstream 255 40500738 ~ 40501410 (-)
LOC100653472 LOC100653472 coding downstream 14025 40485361 ~ 40487640 (-)
rps18 LOC107726165 coding downstream 30100 40469109 ~ 40471565 (-)
LOC110496236 NA coding downstream 46117 40445255 ~ 40455548 (-)
LOC100136269 LOC106588393 coding downstream 72192 40417575 ~ 40429473 (-)
LOC110496249 NA coding upstream 41731 40545209 ~ 40553619 (-)
LOC118941161 NA coding upstream 171991 40675469 ~ 40678077 (-)
LOC110496253 LOC106588368 coding upstream 283349 40786827 ~ 40807771 (-)
LOC110496254 col14a1 coding upstream 311349 40814827 ~ 40901992 (-)
LOC118941164 LOC106588367 coding upstream 400278 40902519 ~ 40908744 (-)
LOC101268904 LOC106588394 non-coding downstream 85975 40392620 ~ 40416084 (-)
G1548439 NA non-coding downstream 131287 40370046 ~ 40370378 (-)
G1548418 NA non-coding downstream 184444 40316985 ~ 40317221 (-)
G1548417 NA non-coding downstream 185082 40316319 ~ 40316583 (-)
G1548413 NA non-coding downstream 189652 40311798 ~ 40312013 (-)
G1548508 NA non-coding upstream 15095 40518573 ~ 40518783 (-)
G1548520 NA non-coding upstream 39513 40542991 ~ 40543403 (-)
G1548521 NA non-coding upstream 41189 40544667 ~ 40544898 (-)
G1548525 NA non-coding upstream 50935 40554413 ~ 40554685 (-)
G1548540 LOC106588374 non-coding upstream 76112 40579590 ~ 40580803 (-)
G1548367 NA other downstream 109782 40385970 ~ 40391883 (-)
LOC110496816 LOC106588265 other downstream 812984 39642841 ~ 39688750 (-)
LOC110496208 LOC106588417 other downstream 870567 39625771 ~ 39641803 (-)
G1546396 LOC106588446 other downstream 1713864 38776284 ~ 38787801 (-)
G1546385 LOC106588448 other downstream 1727981 38768097 ~ 38773684 (-)
G1548517 NA other upstream 136697 40640175 ~ 40685641 (-)
LOC110496277 LOC106588347 other upstream 1159958 41663436 ~ 41671516 (-)
G1550177 LOC106569881 other upstream 1811808 42315286 ~ 42316079 (-)
G1550202 NA other upstream 1855670 42359148 ~ 42359628 (-)

Expression


Co-expression Network