LOC110496279 (LOC106588343)


Basic Information

Item Value
gene id LOC110496279
gene name LOC106588343
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 41704525 ~ 41721962 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572080.2
tcaatgtaatccattttgaattcaggctatgacactacaaaatgttgaataagtcaaggggtatgaatactttctgaaggcactatatcaCACATTGCAGATGGAAAGCAAAGATCTAAGCTATCAAATGGGCTTTGTCAACTCCAAAGGTCAACCCCTATGTTTATCAGTATATGAATGCTTGGCAATTTCTCTTGTTTCTAAACATATTTAAGATACATAGGCAGTTTGTGGTGACTGAATGAGGAAATGTTGAAGAGGGATGTGATTACTATGAAAAATGTAACTTCTCAAAATTACAAGATAAGTACTCATGGTGCAATGCCGAGCCAGCAAATAATGTGTAGATAGCCAAGGAAGTACCAGGTGCACGAAACATCCTTGGGTACAAAATCTCTTAGGTCAATTTTCTATGGACCTTTCAAATCTACAGTAGGCCATACATTTGAGATTCAGAATAGGTATTAGGATGTttgtatgtgttttatagtataaataacaatgaaaaaaaaatcctcaatcaTGTATGACGAGTTTCAGTGCTGATTCTTTTGTTTgattctctgtgatgtcatacaGCCCAATAGCCTACACTGCATGAGTTCTGAACAAGCATTGCATGTACATGCATGTTTTCACCCTAAAGCGGAGCTTGTGCAGTTCATTCCCGTTGCCTCGGTTACCGGGATGGGCTTGCACTGGCAATAAATACACCACACCTTGACTCTCAGGTGTGGCAATTGTGTCAGTGCAATCTGAGGCTTCGTCATGAGATCAGCAAAACCATAACGTTTACCTCTTTCACTCAAAGGTTACTCATGGTACAGTTGCTGTACTTTTAACTTAACAAAGGCATTGAAAAGTTTTGTCGGCCTGTCAACCAAACACCACCAACAAGCACATAAACAAATCCCTCAGTATACGATCATTTGGCAGAACTGATCCGACACGAACCTGTCTGCTGTTACTCTTGACAACATCCAATCAGGAAACTTGGCACTGAGAACCTGCACAGCAACAACATGGAGCCAAGAGAGGAAGAGCAAGaaatggagaaggaggaggaggacatttACATTCCCAGGTCACCTCCCAGGAATGCTCAAGGCACAGATGCAGTCTCGGGGAACCCCACATTAGCTGCTGATGACAGGCCAGCCCCGCCCAGCAGCCTGGCTCTGACAGGGCCCCGACCCAGGAAGAAGCGTCTGGTGGCTCCCGCCCTAAGTCTGACGCTGGATCGCAGTGACTCGGCGGTGTCCGACGACTATGCCACagctgccctctctccctcccctgatGACGACGATCTGGGGCTGGACATCGACTTGGATGCCATGGAAACGCCCTCGGACAGCGAGTCCCTCCATTTTCCAGTGCACGACATGGATTTGGAGGATGACCTGCTTCGTCTGGGAGTGGCATCCCGTTGCCATAAGGCCCGTGGGTCAGTACCAGAGCAGATGGGAGTGGGCTCTCTTGACCAAGACCAAGTGGACAGCCAGGGCACTAGGTGGCGCCGGTTCCGCACAGGAGATCCGCTTCAGGAGAGTCTGGTCAACATGAGTGTACTGGAACCTTTCCTTCGAGTCTTGTCACATGGGGGCTACTATGGAGAAGGGtctaatgacatcattgtgttCTCTTCCTGCTATCTCCCTGAAAACAACATGGAGAACTACCAGCATGTCATGGACAACCTGTTCAGGTACGTTGTGGGAACGTTGGACCTGATGGTTGCGGAGAACTACGTCATTGTGTACCTGTGTGCCATGGCCCAGCGTGACAAGCTCCCCACCATTGGCTGGCTCAGAGAGTGTTACACCACCGTTGACAGAAGGTTGAGGAAGAATCTGAAAGGTCTGTACATTGTACACCCAACCTGGTACATCAAGGCCCTGATCACCATCATCAAGCCCTTCATCAGCTCCAAATTCAGTCGCAAGCTTCAGTTTATCGACAGCCTTCGGGAGCTGTCCCAGCACATCTCTATTGAGCGTGTGCAGATCCCCGACTGCGTCAGACAGTTTGACGAGAATATGGACAGGTGATATGCTGAAAAGGTTGATCTGGACCACAGTGCAAAGGTACATGAAGACAAAACAGTGGACTAAAAAAGGCTCAAATCTGTCAACCAATTACTTGACACGGAGGATGAACCTGGCTGCCCAATCGCACGTCAGTTGTCCTATGAGACAACTTTAACCAAAGCATCTACTGGAGGACCACAAGAAGAAACACTGAGCTCCAAAGGTATCGAGActgtaaccacgtttccatccacagtttttatgcagTAAAATCATACCATATAAAAAAAACCAAAAAAACAAcagctgatggaaacaggaagtttcggtGCAATGTTATAAATGCAGACAGAtcatttgttcgttcgacatgtCGGGAtatttttgtgtcagtaaaatgaATAATGtgagaaatggcagtggaaacgccttcatgcacaaatattgatataataaccatcatatcgaaggtaacttggagtcacgcgatgtaATGGGGCGTGGTTCTCCCGCtacaactcaggaaaccatgcagattattaggctacagatgaagtGATGGATtttacagggtggtgaaagtgcaatgTGATCTTTATGCCcctttccaatacattttgagggtcttattctggtgacatgatgatcagtGCTTGACTGCCATTTTTGACCAATAAAAATATTCTCacctctta
>XM_021572083.2
tcaatgtaatccattttgaattcaggctatgacactacaaaatgttgaataagtcaaggggtatgaatactttctgaaggcactatatcaCACATTGCAGATGGAAAGCAAAGATCTAAGCTATCAAATGGGCTTTGTCAACTCCAAAGGTCAACCCCTATGTTTATCAGTATATGAATGCTTGGCAATTTCTCTTGTTTCTAAACATATTTAAGATACATAGGCAGTTTGTGGTGACTGAATGAGGAAATGTTGAAGAGGGATGTGATTACTATGAAAAATGTAACTTCTCAAAATTACAAGATAAGTACTCATGGTGCAATGCCGAGCCAGCAAATAATGTGTAGATAGCCAAGGAAGTACCAGGTGCACGAAACATCCTTGGGTACAAAATCTCTTAGGTCAATTTTCTATGGACCTTTCAAATCTACAGTAGGCCATACATTTGAGATTCAGAATAGGTATTAGGATGTttgtatgtgttttatagtataaataacaatgaaaaaaaaatcctcaatcaTGTATGACGAGTTTCAGTGCTGATTCTTTTGTTTgattctctgtgatgtcatacaGCCCAATAGCCTACACTGCATGAGTTCTGAACAAGCATTGCATGTACATGCATGTTTTCACCCTAAAGCGGAGCTTGTGCAGTTCATTCCCGTTGCCTCGGTTACCGGGATGGGCTTGCACTGGCAATAAATACACCACACCTTGACTCTCAGGTGTGGCAATTGTGTCAGTGCAATCTGAGGCTTCGTCATGAGATCAGCAAAACCATAACGTTTACCTCTTTCACTCAAAGGTTACTCATGGTACAGTTGCTGTACTTTTAACTTAACAAAGGCATTGAAAAGTTTTGTCGGCCTGTCAACCAAACACCACCAACAAGTCACAGCTAAAGTTGCTCCTGAGTTGTAATAGCGGTTTGGACTTTTCATTTCTTCGGGCCAAAAGGTCTGCTGTTACTCTTGACAACATCCAATCAGGAAACTTGGCACTGAGAACCTGCACAGCAACAACATGGAGCCAAGAGAGGAAGAGCAAGaaatggagaaggaggaggaggacatttACATTCCCAGGTCACCTCCCAGGAATGCTCAAGGCACAGATGCAGTCTCGGGGAACCCCACATTAGCTGCTGATGACAGGCCAGCCCCGCCCAGCAGCCTGGCTCTGACAGGGCCCCGACCCAGGAAGAAGCGTCTGGTGGCTCCCGCCCTAAGTCTGACGCTGGATCGCAGTGACTCGGCGGTGTCCGACGACTATGCCACagctgccctctctccctcccctgatGACGACGATCTGGGGCTGGACATCGACTTGGATGCCATGGAAACGCCCTCGGACAGCGAGTCCCTCCATTTTCCAGTGCACGACATGGATTTGGAGGATGACCTGCTTCGTCTGGGAGTGGCATCCCGTTGCCATAAGGCCCGTGGGTCAGTACCAGAGCAGATGGGAGTGGGCTCTCTTGACCAAGACCAAGTGGACAGCCAGGGCACTAGGTGGCGCCGGTTCCGCACAGGAGATCCGCTTCAGGAGAGTCTGGTCAACATGAGTGTACTGGAACCTTTCCTTCGAGTCTTGTCACATGGGGGCTACTATGGAGAAGGGtctaatgacatcattgtgttCTCTTCCTGCTATCTCCCTGAAAACAACATGGAGAACTACCAGCATGTCATGGACAACCTGTTCAGGTACGTTGTGGGAACGTTGGACCTGATGGTTGCGGAGAACTACGTCATTGTGTACCTGTGTGCCATGGCCCAGCGTGACAAGCTCCCCACCATTGGCTGGCTCAGAGAGTGTTACACCACCGTTGACAGAAGGTTGAGGAAGAATCTGAAAGGTCTGTACATTGTACACCCAACCTGGTACATCAAGGCCCTGATCACCATCATCAAGCCCTTCATCAGCTCCAAATTCAGTCGCAAGCTTCAGTTTATCGACAGCCTTCGGGAGCTGTCCCAGCACATCTCTATTGAGCGTGTGCAGATCCCCGACTGCGTCAGACAGTTTGACGAGAATATGGACAGGTGATATGCTGAAAAGGTTGATCTGGACCACAGTGCAAAGGTACATGAAGACAAAACAGTGGACTAAAAAAGGCTCAAATCTGTCAACCAATTACTTGACACGGAGGATGAACCTGGCTGCCCAATCGCACGTCAGTTGTCCTATGAGACAACTTTAACCAAAGCATCTACTGGAGGACCACAAGAAGAAACACTGAGCTCCAAAGGTATCGAGActgtaaccacgtttccatccacagtttttatgcagTAAAATCATACCATATAAAAAAAACCAAAAAAACAAcagctgatggaaacaggaagtttcggtGCAATGTTATAAATGCAGACAGAtcatttgttcgttcgacatgtCGGGAtatttttgtgtcagtaaaatgaATAATGtgagaaatggcagtggaaacgccttcatgcacaaatattgatataataaccatcatatcgaaggtaacttggagtcacgcgatgtaATGGGGCGTGGTTCTCCCGCtacaactcaggaaaccatgcagattattaggctacagatgaagtGATGGATtttacagggtggtgaaagtgcaatgTGATCTTTATGCCcctttccaatacattttgagggtcttattctggtgacatgatgatcagtGCTTGACTGCCATTTTTGACCAATAAAAATATTCTCacctctta
>XM_021572084.2
tcaatgtaatccattttgaattcaggctatgacactacaaaatgttgaataagtcaaggggtatgaatactttctgaaggcactatatcaCACATTGCAGATGGAAAGCAAAGATCTAAGCTATCAAATGGGCTTTGTCAACTCCAAAGGTCAACCCCTATGTTTATCAGTATATGAATGCTTGGCAATTTCTCTTGTTTCTAAACATATTTAAGATACATAGGCAGTTTGTGGTGACTGAATGAGGAAATGTTGAAGAGGGATGTGATTACTATGAAAAATGTAACTTCTCAAAATTACAAGATAAGTACTCATGGTGCAATGCCGAGCCAGCAAATAATGTGTAGATAGCCAAGGAAGTACCAGGTGCACGAAACATCCTTGGGTACAAAATCTCTTAGGTCAATTTTCTATGGACCTTTCAAATCTACAGTAGGCCATACATTTGAGATTCAGAATAGGTATTAGGATGTttgtatgtgttttatagtataaataacaatgaaaaaaaaatcctcaatcaTGTATGACGAGTTTCAGTGCTGATTCTTTTGTTTgattctctgtgatgtcatacaGCCCAATAGCCTACACTGCATGAGTTCTGAACAAGCATTGCATGTACATGCATGTTTTCACCCTAAAGCGGAGCTTGTGCAGTTCATTCCCGTTGCCTCGGTTACCGGGATGGGCTTGCACTGGCAATAAATACACCACACCTTGACTCTCAGGTGTGGCAATTGTGTCAGTGCAATCTGAGGCTTCGTCATGAGATCAGCAAAACCATAACGTTTACCTCTTTCACTCAAAGGTTACTCATGGTACAGTTGCTGTACTTTTAACTTAACAAAGGCATTGAAAAGTTTTGTCGGCCTGTCAACCAAACACCACCAACAAGGTCTGCTGTTACTCTTGACAACATCCAATCAGGAAACTTGGCACTGAGAACCTGCACAGCAACAACATGGAGCCAAGAGAGGAAGAGCAAGaaatggagaaggaggaggaggacatttACATTCCCAGGTCACCTCCCAGGAATGCTCAAGGCACAGATGCAGTCTCGGGGAACCCCACATTAGCTGCTGATGACAGGCCAGCCCCGCCCAGCAGCCTGGCTCTGACAGGGCCCCGACCCAGGAAGAAGCGTCTGGTGGCTCCCGCCCTAAGTCTGACGCTGGATCGCAGTGACTCGGCGGTGTCCGACGACTATGCCACagctgccctctctccctcccctgatGACGACGATCTGGGGCTGGACATCGACTTGGATGCCATGGAAACGCCCTCGGACAGCGAGTCCCTCCATTTTCCAGTGCACGACATGGATTTGGAGGATGACCTGCTTCGTCTGGGAGTGGCATCCCGTTGCCATAAGGCCCGTGGGTCAGTACCAGAGCAGATGGGAGTGGGCTCTCTTGACCAAGACCAAGTGGACAGCCAGGGCACTAGGTGGCGCCGGTTCCGCACAGGAGATCCGCTTCAGGAGAGTCTGGTCAACATGAGTGTACTGGAACCTTTCCTTCGAGTCTTGTCACATGGGGGCTACTATGGAGAAGGGtctaatgacatcattgtgttCTCTTCCTGCTATCTCCCTGAAAACAACATGGAGAACTACCAGCATGTCATGGACAACCTGTTCAGGTACGTTGTGGGAACGTTGGACCTGATGGTTGCGGAGAACTACGTCATTGTGTACCTGTGTGCCATGGCCCAGCGTGACAAGCTCCCCACCATTGGCTGGCTCAGAGAGTGTTACACCACCGTTGACAGAAGGTTGAGGAAGAATCTGAAAGGTCTGTACATTGTACACCCAACCTGGTACATCAAGGCCCTGATCACCATCATCAAGCCCTTCATCAGCTCCAAATTCAGTCGCAAGCTTCAGTTTATCGACAGCCTTCGGGAGCTGTCCCAGCACATCTCTATTGAGCGTGTGCAGATCCCCGACTGCGTCAGACAGTTTGACGAGAATATGGACAGGTGATATGCTGAAAAGGTTGATCTGGACCACAGTGCAAAGGTACATGAAGACAAAACAGTGGACTAAAAAAGGCTCAAATCTGTCAACCAATTACTTGACACGGAGGATGAACCTGGCTGCCCAATCGCACGTCAGTTGTCCTATGAGACAACTTTAACCAAAGCATCTACTGGAGGACCACAAGAAGAAACACTGAGCTCCAAAGGTATCGAGActgtaaccacgtttccatccacagtttttatgcagTAAAATCATACCATATAAAAAAAACCAAAAAAACAAcagctgatggaaacaggaagtttcggtGCAATGTTATAAATGCAGACAGAtcatttgttcgttcgacatgtCGGGAtatttttgtgtcagtaaaatgaATAATGtgagaaatggcagtggaaacgccttcatgcacaaatattgatataataaccatcatatcgaaggtaacttggagtcacgcgatgtaATGGGGCGTGGTTCTCCCGCtacaactcaggaaaccatgcagattattaggctacagatgaagtGATGGATtttacagggtggtgaaagtgcaatgTGATCTTTATGCCcctttccaatacattttgagggtcttattctggtgacatgatgatcagtGCTTGACTGCCATTTTTGACCAATAAAAATATTCTCacctctta

Function

NR:

description
BCL2/adenovirus E1B 19 kDa protein-interacting protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572080.2 False 2725 mRNA 0.46 11 41704525 41721962
XM_021572083.2 False 2732 mRNA 0.46 10 41704525 41721962
XM_021572084.2 True 2667 mRNA 0.46 10 41704525 41721962

Neighbor

gene id symbol gene type direction distance location
LOC110496277 LOC106588347 coding downstream 33009 41663436 ~ 41671516 (-)
LOC110496275 LOC106588348 coding downstream 41649 41650577 ~ 41662876 (-)
LOC110496274 NA coding downstream 58912 41618290 ~ 41645613 (-)
LOC110496931 LOC106588283 coding downstream 171063 41532331 ~ 41533462 (-)
LOC110496269 LOC106588349 coding downstream 173199 41530743 ~ 41531326 (-)
LOC110496281 LOC106588342 coding upstream 1352 41723314 ~ 41752064 (-)
LOC110496283 LOC106588340 coding upstream 57599 41779561 ~ 41812159 (-)
LOC110496284 LOC106588339 coding upstream 107193 41829155 ~ 41841256 (-)
LOC110496288 LOC106588334 coding upstream 224300 41946262 ~ 41962098 (-)
LOC110496289 jtb coding upstream 287887 42009849 ~ 42014114 (-)
G1549861 NA non-coding downstream 54806 41649488 ~ 41649719 (-)
G1549241 NA non-coding downstream 202232 41502018 ~ 41502293 (-)
G1549213 NA non-coding downstream 219147 41485019 ~ 41485378 (-)
G1549194 NA non-coding downstream 230971 41473318 ~ 41473554 (-)
G1549888 psb4 non-coding upstream 119750 41841712 ~ 41843057 (-)
G1549939 LOC106588337 non-coding upstream 150165 41872127 ~ 41873029 (-)
G1549941 LOC106588337 non-coding upstream 152095 41874057 ~ 41875450 (-)
G1549942 NA non-coding upstream 179213 41901175 ~ 41923079 (-)
G1549970 NA non-coding upstream 204767 41926729 ~ 41927158 (-)
LOC118941164 LOC106588367 other downstream 795900 40902519 ~ 40908744 (-)
G1548517 NA other downstream 1018884 40640175 ~ 40685641 (-)
G1548367 NA other downstream 1312642 40385970 ~ 40391883 (-)
LOC110496816 LOC106588265 other downstream 2015844 39642841 ~ 39688750 (-)
G1550177 LOC106569881 other upstream 593324 42315286 ~ 42316079 (-)
G1550202 NA other upstream 637186 42359148 ~ 42359628 (-)
LOC118936491 LOC106588302 other upstream 1173069 42895031 ~ 43015119 (-)
LOC118940987 NA other upstream 1909044 43624763 ~ 43668196 (-)
G1552768 LOC106588550 other upstream 3098801 44820763 ~ 44828808 (-)

Expression


Co-expression Network