XLOC_003428 (BX571675.1)



Basic Information


Item Value
gene id XLOC_003428
gene name BX571675.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 23397270 ~ 23397385 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00006700
ATTaaagccatatcacactgcagcCCAGGACTGGTCGCTCACTGAATCTaaacagggctgagcctggttggTACCTAGATGGGAGCCCACTAGGGacaactaggttgctgttggag

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000108760

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00006700 True 116 rRNA 0.53 1 23397270 23397385

Neighbor


gene id symbol gene type direction distance location
XLOC_003427 csf1a coding upstream 100078 23265157 ~ 23297192 (+)
XLOC_003426 NA coding upstream 470082 22920469 ~ 22927188 (+)
XLOC_003425 CU861893.1 coding upstream 683139 22714015 ~ 22714131 (+)
XLOC_003424 si:ch211-86h15.1 coding upstream 766881 22623284 ~ 22630389 (+)
XLOC_003423 BX537143.1 coding upstream 797677 22596726 ~ 22599593 (+)
XLOC_003429 si:ch73-21d24.1 coding downstream 172484 23569869 ~ 23571593 (+)
XLOC_003430 NA coding downstream 196964 23594349 ~ 23597671 (+)
XLOC_003431 nfasca coding downstream 307025 23704410 ~ 23884805 (+)
XLOC_003432 NA coding downstream 498144 23895529 ~ 23913499 (+)
XLOC_003433 cntn2 coding downstream 535631 23933016 ~ 23987682 (+)
XLOC_003369 CR854846.2 misc upstream 7274188 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 10685274 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 10703007 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 10711671 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 10717242 12679732 ~ 12680028 (+)
XLOC_003419 NA non-coding upstream 1493576 21902677 ~ 21903694 (+)
XLOC_003418 CR812468.2 non-coding upstream 1746632 21650522 ~ 21650638 (+)
XLOC_003436 NA non-coding downstream 618450 24015835 ~ 24024576 (+)
XLOC_003440 NA non-coding downstream 663771 24061156 ~ 24083588 (+)
XLOC_003441 FP102969.1 non-coding downstream 718698 24116083 ~ 24151217 (+)
XLOC_003417 NA non-coding upstream 1638245 21612671 ~ 21759025 (+)

Expression



Co-expression Network