LOC110496289 (jtb)


Basic Information

Item Value
gene id LOC110496289
gene name jtb
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 42009849 ~ 42014114 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572102.2
GGGACCGGGTGCAACGCATTTGATGACGTGCGTATTCATCAGCGTTTACAACATGACTCAAAATGGCTGTGCTCTTCTCCACTGGACGGCTACTCGGGAACTGAAAGAAAAAGCAACCTAATTACACCAACAATTTGTTCGACATCTGTTAAGGTATCAGCCATTTTGGACCATAGAGGATAATTCCACTATGACAAGCTTCCAGCCTTGGTTGTAATTGTGGCACACATCTCACACACCTGCATGGGGAGGATGGAGAGCGATTGCAGAATCCCCATGTTGTGCTTGAGGCCCAGAGTCCTGGCTTTGCATGCACTCTTCTGGGGTTTGGTGTCTCTCAGAGTGTTTGGTGCAGCTCTGCTGAGTGAGGAGAAGACCACAGTGGCCAGGCCGGTAACCACCCCCTGTTGGCAGATGGAGGAGTTTGTGGTTGCGGTGGAATGCTCCCGGTGCGACGCTTTCCAGTCGAAGTCATGGGCAGCATGTACTCAGACGGGATACGTGGAGAGGATCAACTGCACCAAGTCTAATAAAGACGAGTACAAGAGCTGCCGCTCTACCCTGATGGAGGAACACCTTTTCTGGAAGTTTGAGGGAGCCATGTTGGGCCTTACCATACTGTTCGCCCTCGTAGTGGTCGCTAGGCAACGTTCGCTGGACCGGCTTGCCTCCGAGAAAGTCCGCAGGCAGATCGAGTCCATCTAGCACAGTACACCAGAGTGAAGAGACTAATAGACCTCAACATAGTCGCTCAGCTCATTTCAAACTCTTAAGAATGAACAGAGACAATGAATTTCAACAGCATGGAGGTCTGGAGAACGGTATATCCGACAATGGGCCAGGCTTACTGGAAAACGGTTTCTAAATTTTGTTATTGAAGAAATGAAAATTAAATCAAGATTGACAATGAAACTCCAGCCCTAATTATAACCCTGCCAAAGGACAAATGATGAACAGTGTCTGGCGTTTTGTCAATGGAATTAATATCCCTAAAGGGAATGGCTCTTCTGAGCAGTGAACTTGCGTTACTTTGATCTAGACAAAGTCTGTGAAATTTATGAATGTTGGGAACTGGCTGCATTCTAAGTAGAAGACAATTGATGGATTCGTTTAAGCCACATACATGGTTCTTTAATTACgtttgaattttttatttttttgcctgtATACAGAATTGTCTGACAAATGGCAAACAAGTTTCTGGCACATGTTTCTGTTCTCTGAGAGAACCAAGAATATAATATAGTGTCAAATGCCCTGTCTCACTTGGAAACATGGACTAATAACTAGGTCTGTGACTCGAATGGATCAAAAATAAGTCTTATTGGGgcataaataagaatttgttcttaactaacttgcctagttaaataaaggttacataaaaaaaaaaaaaggggatgGGTTTGCATAGTGTTATTGTGTACTGGAGCATGAGTGTCATGCTGCAATGCTGGTTTCATATTTCCAAATTTCAGTATTGGTGTTCTACCGAAAGTCTACAATCACTATGTTGTGAAATCTTGTGTGTTTGGAGATTCCATTGCAGACATGGTTCTAAATGCAAACACTAACATTTGACTACTAGTGTTTTTGATAGGCTATAGAGTTTCCAATATACACGACACACATTCATTTTAAAAACTGTTGGATTTCCACTGATTGTGACTCTTTTTTTTAATGTTGGTTGGTCTCTGAGCTTAGTGATTGAACAAATCTGGAAAATCTTGGCAAACTAATGATTTTATCATATTTTTACATTTCAACTGTAGATAATGTATTTTTAGGAAAGGTGTAAGATGTTTTCAAACCTCAGCAGCTGACAGATTACAAAATAAATGGGGGGGGGAATCTGGGTTTTTGTTGTAATTAAGTCCACTTTTCAGGGATATAAGGGACAACACAAGTTGAATATGAAAAAGATGCTTCCCAGAGTCAACTTAGCCTACAGTATTCGTATCAATACACTTTGATGTACCAGGAAA
>XM_021572103.2
GGGACCGGGTGCAACGCATTTGATGACGTGCGTATTCATCAGCGTTTACAACATGACTCAAAATGGCTGTGCTCTTCTCCACTGGACGGCTACTCGGGAACTGAAAGAAAAAGCAACCTAATTACACCAACAATTTGTTCGACATCTGTTAAGGTATCAGCCATTTTGGACCATAGAGGATAATTCCACTATGACAAGCTTCCAGCCTTGGTTGTAATTGTGGCACACATCTCACACACCTGCATGGGGAGGATGGAGAGCGATTGCAGAATCCCCATGTTGTGCTTGAGGCCCAGAGTCCTGGCTTTGCATGCACTCTTCTGGGGTTTGGTGTCTCTCAGAGTGTTTGGTGCAGCTCTGCTGAGTGAGGAGAAGACCACAGTGGCCAGGCCGGTAACCACCCCCTGTTGGCAGATGGAGGAGTTTGTGGTTGCGGTGGAATGCTCCCGGTGCGACGCTTTCCAGTCGTCATGGGCAGCATGTACTCAGACGGGATACGTGGAGAGGATCAACTGCACCAAGTCTAATAAAGACGAGTACAAGAGCTGCCGCTCTACCCTGATGGAGGAACACCTTTTCTGGAAGTTTGAGGGAGCCATGTTGGGCCTTACCATACTGTTCGCCCTCGTAGTGGTCGCTAGGCAACGTTCGCTGGACCGGCTTGCCTCCGAGAAAGTCCGCAGGCAGATCGAGTCCATCTAGCACAGTACACCAGAGTGAAGAGACTAATAGACCTCAACATAGTCGCTCAGCTCATTTCAAACTCTTAAGAATGAACAGAGACAATGAATTTCAACAGCATGGAGGTCTGGAGAACGGTATATCCGACAATGGGCCAGGCTTACTGGAAAACGGTTTCTAAATTTTGTTATTGAAGAAATGAAAATTAAATCAAGATTGACAATGAAACTCCAGCCCTAATTATAACCCTGCCAAAGGACAAATGATGAACAGTGTCTGGCGTTTTGTCAATGGAATTAATATCCCTAAAGGGAATGGCTCTTCTGAGCAGTGAACTTGCGTTACTTTGATCTAGACAAAGTCTGTGAAATTTATGAATGTTGGGAACTGGCTGCATTCTAAGTAGAAGACAATTGATGGATTCGTTTAAGCCACATACATGGTTCTTTAATTACgtttgaattttttatttttttgcctgtATACAGAATTGTCTGACAAATGGCAAACAAGTTTCTGGCACATGTTTCTGTTCTCTGAGAGAACCAAGAATATAATATAGTGTCAAATGCCCTGTCTCACTTGGAAACATGGACTAATAACTAGGTCTGTGACTCGAATGGATCAAAAATAAGTCTTATTGGGgcataaataagaatttgttcttaactaacttgcctagttaaataaaggttacataaaaaaaaaaaaaggggatgGGTTTGCATAGTGTTATTGTGTACTGGAGCATGAGTGTCATGCTGCAATGCTGGTTTCATATTTCCAAATTTCAGTATTGGTGTTCTACCGAAAGTCTACAATCACTATGTTGTGAAATCTTGTGTGTTTGGAGATTCCATTGCAGACATGGTTCTAAATGCAAACACTAACATTTGACTACTAGTGTTTTTGATAGGCTATAGAGTTTCCAATATACACGACACACATTCATTTTAAAAACTGTTGGATTTCCACTGATTGTGACTCTTTTTTTTAATGTTGGTTGGTCTCTGAGCTTAGTGATTGAACAAATCTGGAAAATCTTGGCAAACTAATGATTTTATCATATTTTTACATTTCAACTGTAGATAATGTATTTTTAGGAAAGGTGTAAGATGTTTTCAAACCTCAGCAGCTGACAGATTACAAAATAAATGGGGGGGGGAATCTGGGTTTTTGTTGTAATTAAGTCCACTTTTCAGGGATATAAGGGACAACACAAGTTGAATATGAAAAAGATGCTTCCCAGAGTCAACTTAGCCTACAGTATTCGTATCAATACACTTTGATGTACCAGGAAA

Function

symbol description
jtb Predicted to be involved in mitotic cytokinesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and midbody. Predicted to colocalize with centrosome and spindle. Orthologous to human JTB (jumping translocation breakpoint).

NR:

description
protein JTB-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572102.2 False 1985 mRNA 0.42 6 42009849 42014114
XM_021572103.2 True 1982 mRNA 0.42 6 42009849 42014114

Neighbor

gene id symbol gene type direction distance location
LOC110496288 LOC106588334 coding downstream 47751 41946262 ~ 41962098 (-)
LOC110496284 LOC106588339 coding downstream 168593 41829155 ~ 41841256 (-)
LOC110496283 LOC106588340 coding downstream 197690 41779561 ~ 41812159 (-)
LOC110496281 LOC106588342 coding downstream 257785 41723314 ~ 41752064 (-)
LOC110496279 LOC106588343 coding downstream 287887 41704525 ~ 41721962 (-)
LOC110496292 LOC106588330 coding upstream 14176 42028290 ~ 42035215 (-)
LOC110496293 tcpg coding upstream 23160 42037274 ~ 42046633 (-)
LOC110496294 LOC106588328 coding upstream 33987 42048101 ~ 42056179 (-)
LOC110496296 LOC106588326 coding upstream 42273 42056387 ~ 42075432 (-)
LOC100135825 tyr coding upstream 74065 42088179 ~ 42093200 (-)
G1550020 NA non-coding downstream 16743 41992853 ~ 41993106 (-)
G1550006 NA non-coding downstream 37082 41972538 ~ 41972767 (-)
G1549977 NA non-coding downstream 67683 41941726 ~ 41942166 (-)
G1549973 NA non-coding downstream 79845 41929778 ~ 41930004 (-)
G1549972 NA non-coding downstream 81380 41927970 ~ 41928469 (-)
G1549997 NA non-coding upstream 88334 42102448 ~ 42102902 (-)
G1549996 NA non-coding upstream 89778 42103892 ~ 42104540 (-)
G1550073 NA non-coding upstream 154952 42169066 ~ 42169326 (-)
G1550104 NA non-coding upstream 177748 42191862 ~ 42192144 (-)
LOC110496277 LOC106588347 other downstream 338335 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 1101224 40902519 ~ 40908744 (-)
G1548517 NA other downstream 1324208 40640175 ~ 40685641 (-)
G1548367 NA other downstream 1617966 40385970 ~ 40391883 (-)
LOC110496816 LOC106588265 other downstream 2321168 39642841 ~ 39688750 (-)
G1550177 LOC106569881 other upstream 301172 42315286 ~ 42316079 (-)
G1550202 NA other upstream 345034 42359148 ~ 42359628 (-)
LOC118936491 LOC106588302 other upstream 880917 42895031 ~ 43015119 (-)
LOC118940987 NA other upstream 1616892 43624763 ~ 43668196 (-)
G1552768 LOC106588550 other upstream 2806649 44820763 ~ 44828808 (-)

Expression


Co-expression Network