LOC110496294 (LOC106588328)


Basic Information

Item Value
gene id LOC110496294
gene name LOC106588328
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 42048101 ~ 42056179 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572108.2
GTCCCGCCTTTCAATTGTCCACTCGTCTTTTTACGGAAAGAGGAGCCGCAGGGTGACAGCAAGGGTCCTCTTTTTCCACAACATATGTGCTCTttgtttctgtattttatttgataATCCTGTTCACTTGAAGGATTTAGAAATATGGCTTCCTTTTTGTCGCTCATCTCTGCTTTCATGTTATCGGTTGTAATATTTTCTGGCGCGGTAGTCGCACGGGGTGATGTGCTAGAGCTAGGGGACGCGGATTTCGATTACCTGGCAGCGGAGCACGAGACGATGTTAGTGAAATTCTACGCTCCGTGGTGTGGACATTGTAAGAAACTAGCCCCAGATTTTGAGACCGCAGCCAGTCGACTGAAAGGGACAGTGCCACTTGCTAAGGTGGATTGCACAGCGAGCCCAGACACATGCGGGCGTTTCGGAGTCACAGGGTACCCCACGCTCAAGATATTCAGAAACGGAGAAGACTCCTCGTCCTATGACGGACCACgctcagcagATGGGATTGTCCACTACATGAAGAAGCAGGCTGGGCCCAACTCGGTTACCCTGCGTAGCGAGGCAGATGTCGAGgcctttgtcaaccactttgacgCCAGTGTAGTGGgtTTCTTCTCTGGGCCTGACAGTGCTCAGCTGGCAGAGTTTCTGAAGGCGGCCGGCGTCATGAGGGACCACTTCCGCTTCGCCCACACCATCAACATGACCCTGGGCCTCAAACACGGGGTGgacactgaGAGTGTTCTGCTGTTCAGGCCTCCAAGGCTGAGCGGTAAGTTTGAGGAGAGCGTGCTGCGCTTTACAGAGACCATCACCACCCACACACTGCGCCGCTTCATCAGAGACAACATTTTCGGAATGTGCCCCCATCTGACCAATGAGAACAGAGATAAGCTGAAGGGGCAGGACTTGTTGACTGCGTACTATGATTTGGACTACCTTCGGAACCCCAAAGGCTCCAACTATTGGAGGAACAGAGTGATGAAGGTGGGTTATCAGTTTGCGTCCCAGGGCCTGAGTTTTGCCGTGGCCAATCGCAGGGACTTTGTGGATGAGCTAGAGGAGGAGTTTGGTCTGGGTGCATCGGACGGAGGAGATCTGCCCTTCGTAACCATCAGAACACAGCAGGGCTTCAAGTACACCATGAGGGAGGAGTTCACGAGAGATGGGAAGTCCCTGGAAAGATTCCTGGAGGATTACTTTGCTGGACGACTAAAACGTTACATCAAGTCGGAGCCCATCCCTGAGAAAAACAAGGGTCCCGTCAAGGTAGTGGTAGCAGAGTCATTTGAGGAGATTGTGAATGACCCTGAGAAGGATGTGCTGATTGAGTTCTATGCCCCCTGGTGTGGTCACTGTAAGAGCCTGGAGCCCAAGTACAAGGAGTTGGCAGAACAGCTCTACTCTGACCCTAATATTGTCATTGCCAAGATGGATGCTACAGCCAATGATGTTCCACAAGGCTTTGATGTGCAAGGGTTTCCCACCATCTACTTTGCTCGGGCAGACAAGAAGGACCAACCCAAACGATATGAGGGAGCCCGTGAAGTGAAGGACTTCATCAAGTACTTGAAGAGAGAAGCCTCGCACATCCCCGTTGTCAGCGGCGTGAGAGAAGACTTGTGAACAGAAGTTAGGCGATGGCAGGGGTGTATGATGGGAAATGTAGCTTGAGACCCCTGGAATTGCGATTGTGGATACGCTGTTCCTGAAGAGTCACAACTTCTGCTGAGATTCTTTATTTCTGATGAAATAACACTCCAGAAACTCTACCCACAAAGTTTTTTTCCCTTGAAACAACAGATTTGAAGGAAATCCAAGTTACATGTTtgactctccaggaacagagctTCTTGTAATTGATCAGGAGGAGGAATAGCATTTCTACAGAAGAAGAGAAACAATGAGTGAGGACTGAAGGCTTCTAATGTCAAGTGACCTGGAAGAGAGATGAGGCTGATTTTCTTGTCATAAGACTGAACCAAACCTTCCCAATTTCCATTCGTATAAAGGCTAAATCAAAATTTACATCAACGGCATGAACTCACCAAGGATCAGTGTGTTGCAGGTTTGTCATGCATCAAATACAGTGAGATTAATATATGCTGTATAATGATACTGTAATAACATCTATTTCTATATAGATCTTGACTTATCGTCTCTCCTCTATCTCAGAACCATCCGTCTTCCTTACCATCGTAAGCCATACCATCCATTCCACCAATGATGCTTACTTGTGTAAAATACTCTGAAATGGCTCCATATTTCCTagttctaaaaaaaaaaagttcagaCGGGTATATACCCGCTGGTCTTTTTATATGTGCGCTTGAGCTACTGAGTTGGTGTCATTCCAGACAGCAccaacaaccaaccaaccaaccacttcACTCCTGATCTGCCTCCTGACTGCATACAAAACCCAAAACATCCCAACCCATTCTCCTTCTTTTTTTTTCCCATGCCAATATCAAATTAACCATATTGGAAATACTGTAAAGGCAATATTCAGATTGGCAAAAATTACAAGTACCACCATGGTGTTCTTGAAAACAAATGTTTGCACCCTATGTTTTTGAATATTCAGGTTTCTATTTATGTTTCTATCATTATATGCCATTTTGCCAGGAATTTTTAGAGCAACTAACTTCTGAAAGGCCTATACGATGTCTGGATGTGGCTATgaaggacaggtgtgtgtgtgtgtgtgtgtgtgtgtagtcgtcATATTTATTGAATAGAGTATACAGGAAGCAACATACTTTGTACATAATGTGTGAAAACGAAGGATATTTGCTATCTTAATTGTCTCTTTTTGGACAGAGCCTTATAATTTATTGATGTATATGTTGCTAGAGTTTTCCACTCAGAGGACCCATTATCCTTAGTATATTTATTTTTGATCTGCTAAGAAATTGAGATATGTCTTTGGCGTTTTCTCACTTAAAAGATTCTGGTACCATTTTTTAAAAATCGGTCTTTGTTGTTTCTTTGACTTTCTTCTGGAAAACAGTCAGACAATAGTCTACTGTCGTACAACGTAGTAAGACAGTTACCATACTTACCATCAGTGAATACATATTTTGTTTTCTGGACACAGTGCAGCGTTCCCCAACTggcgagccccccccccccccc
>XR_005037487.1
GTCCCGCCTTTCAATTGTCCACTCGTCTTTTTACGGAAAGAGGAGCCGCAGGGTGACAGCAAGGGTCCTCTTTTTCCACAACATATGTGCTCTttgtttctgtattttatttgataATCCTGTTCACTTGAAGGATTTAGAAATATGGCTTCCTTTTTGTCGCTCATCTCTGCTTTCATGTTATCGGTTGTAATATTTTCTGGCGCGGTAGTCGCACGGGGTGATGTGCTAGAGCTAGGGGACGCGGATTTCGATTACCTGGCAGCGGAGCACGAGACGATGTTAGTGAAATTCTACGCTCCGTGGTGTGGACATTGTAAGAAACTAGCCCCAGATTTTGAGACCGCAGCCAGTCGACTGAAAGGGACAGTGCCACTTGCTAAGGTGGATTGCACAGCGAGCCCAGACACATGCGGGCGTTTCGGAGTCACAGGGTACCCCACGCTCAAGATATTCAGAAACGGAGAAGACTCCTCGTCCTATGACGGACCACgctcagcagATGGGATTGTCCACTACATGAAGAAGCAGGCTGGGCCCAACTCGGTTACCCTGCGTAGCGAGGCAGATGTCGAGgcctttgtcaaccactttgacgCCAGTGTAGTGGgtTTCTTCTCTGGGCCTGACAGTGCTCAGCTGGCAGAGTTTCTGAAGGCGGCCGGCGTCATGAGGGACCACTTCCGCTTCGCCCACACCATCAACATGACCCTGGGCCTCAAACACGGGGTGgacactgaGAGTGTTCTGCTGTTCAGGCCTCCAAGGCTGAGCGGTAAGTTTGAGGAGAGCGTGCTGCGCTTTACAGAGACCATCACCACCCACACACTGCGCCGCTTCATCAGAGACAACATTTTCGGAATGTGCCCCCATCTGACCAATGAGAACAGAGATAAGCTGAAGGGGCAGGACTTGTTGACTGCGTACTATGATTTGGACTACCTTCGGAACCCCAAAGGCTCCAACTATTGGAGGAACAGAGTGATGAAGGTGGGTTATCAGTTTGCGTCCCAGGGCCTGAGTTTTGCCGTGGCCAATCGCAGGGACTTTGTGGATGAGCTAGAGGAGGAGTTTGGTCTGGGTGCATCGGACGGAGGAGATCTGCCCTTCGTAACCATCAGAACACAGCAGGGCTTCAAGTACACCATGAGGGAGGAGTTCACGAGAGATGGGAAGTCCCTGGAAAGATTCCTGGAGGATTACTTTGCTGGACGACTAAAACGTTACATCAAGTCGGAGCCCATCCCTGAGAAAAACAAGGGTCCCGTCAAGGTAGTGGTAGCAGAGTCATTTGAGGAGATTGTGAATGACCCTGAGAAGGATGTGCTGATTGAGTTCTATGCCCCCTGGTGTGGTCACTGTAAGAGCCTGGAGCCCAAGTACAAGGAGTTGGCAGAACAGCTCTACTCTGACCCTAATATTGTCATTGCCAAGATGGATGCTACAGCCAATGATGTTCCACAAGGCTTTGATGTGCAAGGGTTTCCCACCATCTACTTTGCTCGGGCAGACAAGAAGGACCAACCCAAACGATATGAGGGAGCCCGTGAAGTGAAGGACTTCATCAAGTACTTGAAGAGAGAAGCCTCGCACATCCCCGTTGTCAGCGGCGTGAGAGAAGACTTGTGAACAGAAGTTAGGCGATGGCAGGGGTGTATGATGGGAAATGTAGCTTGAGACCCCTGGAATTGCGATTGTGGATACGCTGTTCCTGAAGAGTCACAACTTCTGCTGAGATTCTTTATTTCTGATGAAATAACACTCCAGAAACTCTACCCACAAAGTTTTTTTCCCTTGAAACAACAGATTTGAAGGAAATCCAAGTTACATGTTtgactctccaggaacagagctTCTTGTAATTGATCAGGAGGAGGAATAGCATTTCTACAGAAGAAGAGAAACAATGAGTGAGGACTGAAGGCTTCTAATGTCAAGTGACCTGGAAGAGAGATGAGGCTGATTTTCTTGTCATAAGACTGAACCAAACCTTCCCAATTTCCATTCGTATAAAGGCTAAATCAAAATTTACATCAACGGCATGAACTCACCAAGGATCAGTGTGTTGCAGAACCATCCGTCTTCCTTACCATCGTAAGCCATACCATCCATTCCACCAATGATGCTTACTTGTGTAAAATACTCTGAAATGGCTCCATATTTCCTagttctaaaaaaaaaaagttcagaCGGGTATATACCCGCTGGTCTTTTTATATGTGCGCTTGAGCTACTGAGTTGGTGTCATTCCAGACAGCAccaacaaccaaccaaccaaccacttcACTCCTGATCTGCCTCCTGACTGCATACAAAACCCAAAACATCCCAACCCATTCTCCTTCTTTTTTTTTCCCATGCCAATATCAAATTAACCATATTGGAAATACTGTAAAGGCAATATTCAGATTGGCAAAAATTACAAGTACCACCATGGTGTTCTTGAAAACAAATGTTTGCACCCTATGTTTTTGAATATTCAGGTTTCTATTTATGTTTCTATCATTATATGCCATTTTGCCAGGAATTTTTAGAGCAACTAACTTCTGAAAGGCCTATACGATGTCTGGATGTGGCTATgaaggacaggtgtgtgtgtgtgtgtgtgtgtgtgtagtcgtcATATTTATTGAATAGAGTATACAGGAAGCAACATACTTTGTACATAATGTGTGAAAACGAAGGATATTTGCTATCTTAATTGTCTCTTTTTGGACAGAGCCTTATAATTTATTGATGTATATGTTGCTAGAGTTTTCCACTCAGAGGACCCATTATCCTTAGTATATTTATTTTTGATCTGCTAAGAAATTGAGATATGTCTTTGGCGTTTTCTCACTTAAAAGATTCTGGTACCATTTTTTAAAAATCGGTCTTTGTTGTTTCTTTGACTTTCTTCTGGAAAACAGTCAGACAATAGTCTACTGTCGTACAACGTAGTAAGACAGTTACCATACTTACCATCAGTGAATACATATTTTGTTTTCTGGACACAGTGCAGCGTTCCCCAACTggcgagccccccccccccccc

Function

NR:

description
protein disulfide-isomerase A3-like

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0006662 glycerol ether metabolic process biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0015035 protein disulfide oxidoreductase activity molecular_function
GO:0016853 isomerase activity molecular_function

KEGG:

id description
K08056 PDIA3, GRP58; protein disulfide-isomerase A3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572108.2 False 3141 mRNA 0.45 13 42048101 42056179
XR_005037487.1 True 3034 mRNA 0.46 14 42048101 42056179

Neighbor

gene id symbol gene type direction distance location
LOC110496293 tcpg coding downstream 1468 42037274 ~ 42046633 (-)
LOC110496292 LOC106588330 coding downstream 12886 42028290 ~ 42035215 (-)
LOC110496289 jtb coding downstream 33987 42009849 ~ 42014114 (-)
LOC110496288 LOC106588334 coding downstream 86003 41946262 ~ 41962098 (-)
LOC110496284 LOC106588339 coding downstream 206845 41829155 ~ 41841256 (-)
LOC110496296 LOC106588326 coding upstream 208 42056387 ~ 42075432 (-)
LOC100135825 tyr coding upstream 32000 42088179 ~ 42093200 (-)
LOC110496298 LOC106588323 coding upstream 49425 42105604 ~ 42132219 (-)
LOC110496297 LOC106588322 coding upstream 88979 42145158 ~ 42268090 (-)
LOC110496299 LOC106569884 coding upstream 223346 42279525 ~ 42286932 (-)
G1550020 NA non-coding downstream 54995 41992853 ~ 41993106 (-)
G1550006 NA non-coding downstream 75334 41972538 ~ 41972767 (-)
G1549977 NA non-coding downstream 105935 41941726 ~ 41942166 (-)
G1549973 NA non-coding downstream 118097 41929778 ~ 41930004 (-)
G1549972 NA non-coding downstream 119632 41927970 ~ 41928469 (-)
G1549997 NA non-coding upstream 46269 42102448 ~ 42102902 (-)
G1549996 NA non-coding upstream 47713 42103892 ~ 42104540 (-)
G1550073 NA non-coding upstream 112887 42169066 ~ 42169326 (-)
G1550104 NA non-coding upstream 135683 42191862 ~ 42192144 (-)
LOC110496277 LOC106588347 other downstream 376587 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 1139476 40902519 ~ 40908744 (-)
G1548517 NA other downstream 1362460 40640175 ~ 40685641 (-)
G1548367 NA other downstream 1656218 40385970 ~ 40391883 (-)
LOC110496816 LOC106588265 other downstream 2359420 39642841 ~ 39688750 (-)
G1550177 LOC106569881 other upstream 259107 42315286 ~ 42316079 (-)
G1550202 NA other upstream 302969 42359148 ~ 42359628 (-)
LOC118936491 LOC106588302 other upstream 838852 42895031 ~ 43015119 (-)
LOC118940987 NA other upstream 1574827 43624763 ~ 43668196 (-)
G1552768 LOC106588550 other upstream 2764584 44820763 ~ 44828808 (-)

Expression


Co-expression Network