LOC110496326


Basic Information

Item Value
gene id LOC110496326
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 42995451 ~ 43005501 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952898.1
TCATTTTACTTTATATTAATTTAAAATTTTACTTTATAAttttactttattttaataatttaCTTTTCCTTTAGAATTGCTTAAAACAATATAAGCACCGCAAGCACTTCTGAACCATTCCGATTTCAGATAGGGACTAAACAAGGCTGACCACTCTCCCCACTCTTATTTTCCATGAGTCATCATGCTAGCAGAGATAATTAGAAAAGATAAGGACATAACAGGGGTCACCATACACCAACAGGAATTGAAACTTTTTCTATTTGCATATTTAACAGCTTTGGTAGTGATTCTCGGATGTTTCTTGAATATCAGATAGCACTGTTGTTTTACTCAAAATACTCAGGGTTTAATTTGTACTTTTAGAAAAAAGATTATACGAATCAAGATTAATGTAGAAGGCGTCCCACAATCCCTAAATGTAGTTAAATCCTTAATTAGCATTCAAATTTTTAGGATGCAATACCAGGAAGTATAAAACACAGCTCTACCATAAGCGCAATATAGTGTGTTCTGTATTAAATATGTGTAGGCCTACTACATACCATTTTTGCCCTGGTATTTCATGTTTAatttatatttgtatatatatatttttttttacaggcaATCAGCAAGCGCAATGAGTTCAGAATATACACCCAGATCCAAGCTTCTGCATGCTGACATTATCAAAGATTGTAAACAaaccagtccaggacctccaacAAAGTATCTGCtaatgacagagaaagagattctGCATGACAGTGAAAATATCAGGCGATGGACTTTTGGTAAAAAAGGACCCGAGCAAAATGAACCGAACGATATTGATGATGGGAGAAACAGGAGCAGGGAAATCAACCCTCATCAATGTGATGGTGAACTACATCCTTGGCGTTGATTGGGAGGATAAATACAGATTTGAAATCATTGCTGATGAGAGTCAAAGTCAAACTAGTTCACAAACAACTGCCATCACTGTGTATGAGATCTTTGGTCACGAAGGTGATCACATTCCATTTTCTTTAACCATCATCGACACTCCAGGATTTGGTGACACAAGCGGAATAGAGCAAGACAAACTCATCACAAAAAAATCTATAGGAGCTGTTTCAATCTCCAAAAGGAGTCCACCACATTGATGCAGTGTGCTTTGTTGTAAAAGCTGCACAAGTGCGCCTCACACCTACACAGCGGTACATTTTTGATTCTGTCCTCTCAATTTTTGGAAAGGACATAGAAAATAACATTGTGGCACTCAGTACTTTTGCAGATAGTGGGGAGCCTTTAGTCCTTCAAGCACTGGTAATGGCAGAAGTTCCATGTGTCAGAAATGAACTTGGTACCCCTGTTTACTTCAAATTCAACAATGTGTTTGCTGGTTTACAAATGGATGAAGATGATGAAGAACAAAACGatgaagaggatgaagaggaggaggaggaggaaaatgaTGAGGTGTGTCAATCATCTTGGAAAATGAGCATGAAAAACATGGCCATGTTTTTTGAATCACTATGTACAATGGAAGCAAAAAGCTTGGTATTAACACGTCAAGTTTTAGagaaacacaaacaactggaAATGGAAATCCAGACATTAACAAAGCAGCTACAAGTTGCAATGCAGCGAGCAGAAGCACTGAGGAGGGTCAGCGACCAATTAGAAGAACATGAAGAGGACATGGAAGCCAACAGAAACTTCTCCATTCTTTTAGATGTAAGTGTGAAGGAGAAATGTGCCGTAAACAAGAAGGCAACAAATTGTAATTCTTGCAGGGAAACTTGCCATCACCCTTGCACAGAATATTTTGGGTGTACACGCATGCAGCAAGACAGATGCACCGTCTGCATAAAGAAATGCAGCTGGAACGATCATTGTAAAGAGAAGTTAATTTATGTCTTTAAAACAGAAGAAGGTGAATCAACGTACCTAGACCTAAAGAGAAAGTATGAAGAATTGGAAGGTCAATCGCTGACAGCAAAGATGTTCCTCATCATCTTTATGAATGAACTTCACCTGCAACTCATTGCCAGCTTAATCTTAATTGTTAAAATAAACAGCATTGTTCAAAAACTGGATCAGATCGCTCTGAGACCAAATCCAATGAGCGCAGCCAAATACCTTGACCTCCTGATTGAAAAAGCGCAAAGGAATCACAACCCCGAGAGAGTCAAGACACTGACAGATATGAAAGAGCAAGAAAAGCTGAAGAATAACTTCGCCAATCTGGTTCATGAATAAGGGTGTATCCTGTCAGTAACCACCACAGGAAGAGCTGAGAGTTAAGCctgcataatgagtaattattaagacatgtttatagtGCTAATGTCAAACTAAATGTACCATTACATAGTTGGGCCATCCATTCATTGGATCCTCTGCTCAACGTACAATTTATGTATAGTTAAACAAAATGATTAATTTTCATTATTCTTGTAAGTTTTCTGTAAAGTGTGAAATATTTTTGTGTGAGATAATCCATTGATACTTTTATTCTATTGACGTAATATTTGTTCGAAAAATCGACATTCCGGTTTAGCATGTGAATGGAGAAGAATCTCATAGACAAGGCGTTCATTTTGCCAAATTTGTACTTTGCATTCTACTTTCTTACATATCAGATTTGATTGGTGAGTTCGTAAATTACCTTTTTTGACGTAAATGTCACACGACTTGAGGAGCAGAAGACCTGTGACTGAAGTTTCAACCGCGATGGCAAACGTGAATGGTAATGGCGTCGACTCCAGTCGGTAATGGTAATGGTGTCGACTCCAGTCGGTAATGGTAATGGCTCCGACTCCAGTCTGGAAGTAGTCTTACCAGGACTCATATCACAGGAACAAACCATCTTTATAAAGGACAGATATTCATTTTTTAACATTCGGACActgtttaacatgatttattCTAAACAATTCTCCAACTCCCCTGAGGTGGTAATCTCCCTAGACGTCCATTCGACAGAATTGAAAGGGAATAGCTATTTGCtgttcttaaaaaaaaaattgaatttggGGAAATTTTTTTCTCATGGATCCGTTTCTTGTATACATCTCCCCAGGCCAGTGTCTGTACCAATGACACCCGTTCTGATGATTTTGCTCTGGAACATTTTGCCCACTGTCCCCTTTAATATTTACCGTCGCCATTGAGACCCTTTCAGTAGCTTTACGGACATCTTCCAATTTTCCAAGGTGTAACACGGGAAGGAGTTGAACataggTTATCATTATATGCAGATGATTTGTTACTCTATGTAAGTAGCCCTGTAACCTGTTTGCCTTCTATCCTTTCTATTCTGGAGAACTTTGTCTCCTTCTCCGGTTACAACCTGAATCTCCAGAAAAGTGAGTGCTTCCCAGTCAATCCAGCAGCGCTGCAGCTCCAGCAGATAGATTTGCTCTTTTAGGTTTGCCGCTCTGGTTTCAAATACCTTGGATTGAAATTCATTATATGCTCTTTTGTTCTGCAAACATTCCTCCCCTTCTTGCACAAATGAAAACTGATTTTCAGAGATGGGGTAGCTTACCACGATCACTTATAGGAAGGATTAATGCTGTAAAAATTAACAGTTTACCCAAATTCTATTTCAATCTATCCCATTGTTTTTACcaaagtgttttatttttttaagtcaaTTAATCAGGCGGTTACCACATTTATCTGGGGAGGAAAGGTACCCAGAGTGAATAGATCTTTACTTCAGAGATTCAAGTTTAGTGGAGGGCTGGCACTACCCAGCGTTTTATACTATTACTGGGCAGCCAGCTTTCAGAAATTGCCATTCTGGTTACATGCTCCAGATACCTCATGGTGCCACCTAAAGGCACATTCTTGTATTTTTGCTTCTCTTGCGTTACTCTGCTTTTCTCGAccaacatccccctctctctatactcGCAAACCTGTAGTGCTTTCCACACTTAAGATTTGGTACCAGTTTCGACTGTATTTTAAATTCTCCTCTGCATCTACTATGGGTCCTATTGACAGGAATCACTTCTTCCCCGCTTCTCTAATAGATAATGCTTTCTTTCACTGGACGAGGAAAGGTAATAAAGTCCTTCCAAGACTTatatgtacatttatttttttctggTTTTCCCAACCTGGCCTCTAAATACTATTTGCCTCCATCTCACCTTCAAATTAGGCATTGTGTCCAATTTTCTGGCTTCCCTGCTCCACCCCCTTGCTAACCCTGGGATGGTATATTGACTCTATTACCTCGACAGAAAGCAGTCATTTCTCAGTTCTATCTGTGTATTTTGTCATTGGACAAACACTCCACCAACAAAACTAAATCTGCTTGGCAGTGGGAAATGGGTGTTGAATTTACACAGGAGTGGTGGGACGAGGCTATTGATAGGGAACGCTCCATTGCATCTTGAGCTCATCTTGGTCTCATACAACGTAAGGTTTTGCATAGAGTGCATTTTTCCAAATCCAGATTGTCTGAAATATATCCAAATGatgagtgatgtcatgtctcACCATATGACCTTAGTCACATGTTCATTCAATGCTTTAAACTACAAAATTACTGggattcattttttaaaactttatctGGGGTGCTTAAAATGAACCTGCAGCAATGTACCTTGATAGCTGTTTTTGGTATTCCAGGAGACTTGTTCTCCTTGGATCCCAAACATGGCGATGTTGCTTTTTACATCCTTATTAGCTCACCGTGGAATTCTTCTCCAGTGGAAGTCTGCTCAGTCCCCCTCTACTTCTCAATGGCTCAACGATGTAATGTTCTTCCTAAAGCTTTAGAAAGTATTCTCTTAGGGGTTCCAATGTATCATTGGATCCCCTAAGAGAAACTCACTGGTCTTCATGATGTTACTTATACTGAAACCATGAACTCTAAACCCACTGGTCTTCATGATGTTACTAATACTGAAGCTATGTGTTCTAAACCCGCTGGTCTTCATGATGCTACTAATACTGAAGACATGTGTTCTAAACCCACTGGTCTTCATGATGTTACTGATACTGAAGACATGTGCTCTAAACCCACTGGTCTTCATGAtgttactaatactgaagacatGTGTTCTAAACCCACTGGTCTTCATGATGTTACTGATACTGAAGACATGTGTTCTAAATCCACTGCTCTTCATGAtgttactaatactgaagacattATAGACCCATTGATCTTCATGATGTTACTAATACTGAAGTCATGTGTTCTAaactcactggaactctctggggACATGTGAACATCTGGCTACTGTGCTGCTCTATTCTGGGAGTGTTGCAGTAACCCTGCCCATGCAAATATTACGATACCACAGCTCACAATCTCCCAGCCTCAAACCCTATTGGACTGGGGCAGCTGTGTGAGTCTGACTTGGGCTGACGAGGGCTGGGGAACCAGAATTCACGCTGGACTATGCATAACGTTCAAGTTGGGGACTTCACTCTCAGGTCTTTATATAGCTATGAATTTAAATCAAAgcttaaaaaaaatcaaaacctATTCTACATTTTGTTCAACATGTCCTTCAAAATAATGCATTTTCTACAACTCGATACCCTTAGTGGTCCCAGTATGTTAACAATGATTTAACATTTTTGCAGAATATATTGAGAGATATGTACATTATCATAGTCCGTAGACAGTCTAACCAATTACATTATTGTATTGTCGTGTCATATTTCAAAGAATTTGTTATTAGAATATGGGAGACTCCGAAGCTCTGCAGCTAATGAGACAGAGCAGTTCCTCTTTAGCTGAGGGAGGTTTTTGTACGACGCTCTAACACTGTGTGAATGGAACGCTGTTACTCTGctgacagtagtaatctcctgcatcttcagcctggactccactgatggtcagagtgTAATGAGTGTTTGATCTACCAGATCCACTCCCACTGAAACGACCTGGAATCCCAGACTGACGGGTTGTAGCATAATAAACCAGGAGTTTAGGAGCTTCTCCAGGTTTCTGCAGGTACCAGTGGAGATTATTACTAGTACTTGAACTGGCTGTACAGCTGATAGAGACAGTCTCTCCTGGACTAACAGACTGAGATTTAGGAGACTGAGTCAGAATGATATCTGCTGATGATtctgaaaaataaaacaaaattcaAGAAAGGCTGATTTGTAAGATTATCAAAACAACAATGATATTGTAAAGCATAGCATATCAAGCTAAatgttaaaatgtttttaaaaattctATCATGTTAAATTAACAAATGAAGTGTAAATCTGAATCCAAATCCATAATGAATAAAAGTTGGTGAAAGTGTCTCTCACCCTGAACAAGGAGCCCCAGTGTCCACAGCAGTAGAATCAGTGACATCATCATTGTGCTGCGTGTCAGTGGATCTGAAAGGAGTGAACAGTCACTGATCAACACTGGGGTTTTAAAAGTATGTGGAGCAATGAGGCAGGACAGCTATGCAAATGTCTCATATTTTACACAaatgcgcgcgcgcacacacacacaaagataaaATAAGTCAGCAGTTTCCAAAACTATGCTTACTGTATTTCAAATCTGAGAATACTAAAATCATAGACAAACCACACATTATAACAACTATTTCTTAAATGGGGCCTAGTTTGACTCGCTCACACAGTCTTTGATGTCCCTCAACAGTGGTTGTCAGTCCCGGGAGAAGGTAAACCAAGCTTAACAGTAGAATTGCTGCCTCTACATTATGTCCTTCAAACCTTTTCATGGTGGACAGTAGTggagctctgtctctctcctctcaccacagTGTGTAAAGGCAGTTTGAGAGACGGGTAAAGTGGGTGTTTTAATTTAAGTTAAAGGTCCCCAGAACCGTATAAAAAAAAGTCACACACTCTATAGAACCATTCAATTGTTAGGAGCATATGTAGTGTGCAACTTTATTTCATTACTTTTATACAGTTTACTTTCCATTAGTCAGCACCTATTCAAGCATTACTGGGATGTGCTTCAGCTCGTGGTTTCATTACCCTATCGTAACCACAAAATATGTTTTAAACTACCGTGCCACGTCGATCTCATGGACTGTCATTCTTGGCATCTACACTGGGGACTAAAGATTAGtggcagagggaggagggaagactGACTCAAATCAGTCATATCTGGTATCAGAGGTGTTGAGGGCTTCTCATTCATATAGAAATATAGCCTATAGTGTTGAATACATGGTTTACAGTATCACTATTTAGGATTTAGCCTTTTTCTTGTTTTGAACCGAAAGGTATGATCCTTTGGGTGGGGATACATTTGCCTGTCCATGTAGCAAATGTGTTACATCTGACATATATGTGTcaagttctgaccttagttcctttgtttttctctttgtttagtatggtcagggcgtgagttggggtgggcagtctatgtttgtttttctatgttggttttctgtgttcagcctagtatggttctcaatcagaggcaggtgtcgttagttgtctctgattgagaataattcttaggtagcctttttctacctgtgtttttgtgggtgtttgtcttccgtgtcagtcGCCAcgcgggactgtttcgtttcttcacgtttattattttgttccagtgttcagttgtgtttttgaataaatcaatatggacacttacca

Function

NR:

description
uncharacterized protein LOC110496326

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952898.1 True 7611 mRNA 0.39 3 42995451 43005501

Neighbor

gene id symbol gene type direction distance location
LOC118936491 LOC106588302 coding downstream 29435 42895031 ~ 43015119 (-)
LOC110496317 LOC106588307 coding downstream 129218 42858871 ~ 42866233 (-)
LOC110496315 NA coding downstream 191023 42788520 ~ 42804428 (-)
LOC110496310 LOC106588521 coding downstream 370945 42618074 ~ 42624506 (-)
LOC110496309 thap7 coding downstream 406533 42555724 ~ 42588918 (-)
LOC110496330 LOC106588299 coding upstream 223430 43228931 ~ 43258006 (-)
LOC110496334 NA coding upstream 477920 43483421 ~ 43517409 (-)
LOC110496332 LOC106588296 coding upstream 512921 43518422 ~ 43539103 (-)
LOC110496335 LOC106588256 coding upstream 548534 43554035 ~ 43560458 (-)
LOC118940978 NA coding upstream 556286 43561787 ~ 43566641 (-)
G1550790 NA non-coding downstream 32113 42896091 ~ 42963338 (-)
G1550800 NA non-coding downstream 41511 42943061 ~ 42953940 (-)
G1550793 NA non-coding downstream 57385 42905428 ~ 42938066 (-)
G1550750 LOC106588302 non-coding downstream 62421 42899904 ~ 42933030 (-)
G1550769 NA non-coding downstream 139502 42855711 ~ 42855949 (-)
G1550861 NA non-coding upstream 80283 43085784 ~ 43086352 (-)
G1550866 NA non-coding upstream 87592 43093093 ~ 43093295 (-)
G1551071 NA non-coding upstream 114821 43120322 ~ 43120941 (-)
G1551087 LOC106562846 non-coding upstream 140261 43145762 ~ 43146344 (-)
G1551599 NA non-coding upstream 591938 43597439 ~ 43598917 (-)
G1550202 NA other downstream 635823 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 679372 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 1323937 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 2086826 40902519 ~ 40908744 (-)
G1548517 NA other downstream 2309810 40640175 ~ 40685641 (-)
LOC118940987 NA other upstream 625505 43624763 ~ 43668196 (-)
G1552768 LOC106588550 other upstream 1815262 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 2042179 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 2059633 45065134 ~ 45073340 (-)
G1553544 NA other upstream 2661860 45667361 ~ 45667740 (-)

Expression


Co-expression Network