LOC110496332 (LOC106588296)


Basic Information

Item Value
gene id LOC110496332
gene name LOC106588296
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43518422 ~ 43539103 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952901.1
GTCGATAACATGTTACAGTAGATAGTTGAGGCATGTGCATTGCTCCCTGTCAGTTCGTAGTCCAAAGTAACGTTAGTCTGTCTGTCCCAACAGCTCTTAGACTCCAGCAAACTCTTCAGCTCATCATGGCTCATCTTCCAGCACTTTTTAAATATGTGGACGAACACCAGGAGCTGTACATTGAGCGTCTTGCCCAATGGGTGGCTGTGCAGAGTGTGTCTGCCTGGCCAGAGAAGCGCGGGGAGATCAAGAAGATGATGGAGATGGCAGCCAAGGACATTGAGAAGCTGGGGGGCACAGTGGAGATGGTGGACATTGGAAAACAGAAGCTTCCCTCCGGAGAGGAGATCCCCTTGCCACCCATCATCCTGGGTTCTTTGGGCTCCGACCCGGGTAAGAAGACTGTGTGCATCTACGGCCACCTGGATGTCCAGCCAGCTGCCATCGATGACGGCTGGGACACGGAGCCCTTCACTCTGGTGGAGAAAGATGGGAAGCTCTATGGCCGAGGCTCAACAGACGACAAAGGTCCAGTGTTGGCCTGGTTCAACTGTATCGAGGGCTACCAGAAGATCCAACAGGAGCTTCCCATCAACATCAAGTTCTGCTTCGAGGGCATGGAGGAATCAGGCTCAGAGGGCCTGGACGATCTGGTGTTCGCCCGCAAAGACACCTTCCTGAAGGACGTGGATTACGTGTGCATCTCAGACAATTATTGGCTGGGCAAAACCAAGCCCTGCATCACCTATGGACTGAGGGGGATCTGCTACTTCTTCATTGAGATGGCGTGCTGTGACAAGGACCTCCATTCTGGGGTGTTTGGGGGCTCTGTCCATGAAGCCATGACCGACCTCATCGCACTGATGgGCTCACTGGTGGACAAGAAGGGGAAGATCCTGGTCCCGGGGATGTATGAAGATGTGGCCAAGGTCACAGACGAGGAAAAGAAACTGTACCAGAAGATCGACTTTGACATGGTGGAGTATGCCAAGGACGTTGGAGCTGGGAAGCTCCTACACGACACCAAGGAGGCTATCCTGATGCACCGCTGGAggtacccctccctctccctgcacGGCATAGAGGGGGCCTTCTCCGACGGAGGTGCTAAGACCGTCATTCCCCGCAAGGTCATCGGCAAGTTCTCCATCCGCCTGGTCCCGGACATGGACCCCAAAATGGTGGAGAAACAGGTTATTGGCCACCTGGAGAAGAAGTTTGCTGAGCTGGAGAGTCCCAACAAGCTCAAGGTGTACATGGGCCATGGGGCCAAGGCCTGGGTGTCTGACTTCAACCATCCCCATTACATGGCTGGGAGAAAGGCCATGAAGACAGTGTTTGGTGTGGAGCCTGACCTGACACGGGAAGGCGGCAGCATCCCCGTCACGCTGACCTTCCAGGAAGCCACCGGCCGTAACGTCATGCTGCTGCCCATGGGCTCGTCTGACGACGGAGCACATTCACAGAATGAGAAACTCAACAGGACAAACTACATCCAGGGCATCAAGATGCTTGGCGCATACTTCCACGAGGTCTCCCAGTTGGAGTAAATGAACTAGCCAGACCTGAGTGAGATGTATCCCTCCGCCTCCTGAGCTTGTGGACCCAACTGTTTTAATTTTCTATCCAATGCAAGTTTCATAATGTTTTCCATGAACTGCTGCTGCTGTACAGCAAAGCAGATCGTTGAAGATGTTCCTTTAGTAATTTGTAATATATCCCAACAAGGTGATAAGTAGAGGAAAATAATATAGAAGTATTGATTATTGTATTGTAGAAGTGCCATCTTGTATATCTTCATCTACTTTATCAGAGTGTTATAGATGAACTATAAACCAAACTCGACAAGGAAACGtggacagtatatatatatatatatatataccctatTACACTTCCATGATGTCACagctttgttgtggtgtatttctGAAAGTGCTAATAGACAACAGCACACTGACATGCACTCATTTCCTCCATTTGGAGGGCTTGGAGATGATTTTATACCTGATCATTTTTTATCTTACGATGTTAGTTTGGTTGGGAAACCTACAActgtaatgtaaaaaaagaaaagaaaccaGCACACCCATTTCAACTAATTTATTCCTGTTAAATACTATGGGTAATCATTTATGAAGAAGTTCACTCAGGAAGCAGAACATTGCAGTATGTATTGAAATGTATATTGCAGTCTTACAACATGAGTAGACCAGAGAAATGAACACACAGGACATAGCCATAGACATCCGCAGATATTGGAGGCATATATTCAGAAGTATTCTAAGTGATGAAAATATCTCCATACTTTTGCATTACATTAAATAGTACAGTATACAAAATGGCATCTTGATTGAGCCATTCAAGGTTCTCTTTCAAACTGGAGCATGACTTGACCTGTGTAATGCATCTACTTTCTCCCTTGTCACTGTGAAACAGGCAACTGTCACATGCCAATATATTCAATAAATCATAACATCAG
>XM_036952902.1
CACGCCCGCGAGGCAGCCCGGTTCCAAAGCGAATCCCAATCAACCTTCACCCGGTGCAAAGCACGCCTACATGGGCGCCCGGGACAGATTAATCGAATCCCCTCATTTAATACACCCCTGAGAGGAAGAAGCGCAGCACAATCTTTTTCTACACTCTTAGACTCCAGCAAACTCTTCAGCTCATCATGGCTCATCTTCCAGCACTTTTTAAATATGTGGACGAACACCAGGAGCTGTACATTGAGCGTCTTGCCCAATGGGTGGCTGTGCAGAGTGTGTCTGCCTGGCCAGAGAAGCGCGGGGAGATCAAGAAGATGATGGAGATGGCAGCCAAGGACATTGAGAAGCTGGGGGGCACAGTGGAGATGGTGGACATTGGAAAACAGAAGCTTCCCTCCGGAGAGGAGATCCCCTTGCCACCCATCATCCTGGGTTCTTTGGGCTCCGACCCGGGTAAGAAGACTGTGTGCATCTACGGCCACCTGGATGTCCAGCCAGCTGCCATCGATGACGGCTGGGACACGGAGCCCTTCACTCTGGTGGAGAAAGATGGGAAGCTCTATGGCCGAGGCTCAACAGACGACAAAGGTCCAGTGTTGGCCTGGTTCAACTGTATCGAGGGCTACCAGAAGATCCAACAGGAGCTTCCCATCAACATCAAGTTCTGCTTCGAGGGCATGGAGGAATCAGGCTCAGAGGGCCTGGACGATCTGGTGTTCGCCCGCAAAGACACCTTCCTGAAGGACGTGGATTACGTGTGCATCTCAGACAATTATTGGCTGGGCAAAACCAAGCCCTGCATCACCTATGGACTGAGGGGGATCTGCTACTTCTTCATTGAGATGGCGTGCTGTGACAAGGACCTCCATTCTGGGGTGTTTGGGGGCTCTGTCCATGAAGCCATGACCGACCTCATCGCACTGATGgGCTCACTGGTGGACAAGAAGGGGAAGATCCTGGTCCCGGGGATGTATGAAGATGTGGCCAAGGTCACAGACGAGGAAAAGAAACTGTACCAGAAGATCGACTTTGACATGGTGGAGTATGCCAAGGACGTTGGAGCTGGGAAGCTCCTACACGACACCAAGGAGGCTATCCTGATGCACCGCTGGAggtacccctccctctccctgcacGGCATAGAGGGGGCCTTCTCCGACGGAGGTGCTAAGACCGTCATTCCCCGCAAGGTCATCGGCAAGTTCTCCATCCGCCTGGTCCCGGACATGGACCCCAAAATGGTGGAGAAACAGGTTATTGGCCACCTGGAGAAGAAGTTTGCTGAGCTGGAGAGTCCCAACAAGCTCAAGGTGTACATGGGCCATGGGGCCAAGGCCTGGGTGTCTGACTTCAACCATCCCCATTACATGGCTGGGAGAAAGGCCATGAAGACAGTGTTTGGTGTGGAGCCTGACCTGACACGGGAAGGCGGCAGCATCCCCGTCACGCTGACCTTCCAGGAAGCCACCGGCCGTAACGTCATGCTGCTGCCCATGGGCTCGTCTGACGACGGAGCACATTCACAGAATGAGAAACTCAACAGGACAAACTACATCCAGGGCATCAAGATGCTTGGCGCATACTTCCACGAGGTCTCCCAGTTGGAGTAAATGAACTAGCCAGACCTGAGTGAGATGTATCCCTCCGCCTCCTGAGCTTGTGGACCCAACTGTTTTAATTTTCTATCCAATGCAAGTTTCATAATGTTTTCCATGAACTGCTGCTGCTGTACAGCAAAGCAGATCGTTGAAGATGTTCCTTTAGTAATTTGTAATATATCCCAACAAGGTGATAAGTAGAGGAAAATAATATAGAAGTATTGATTATTGTATTGTAGAAGTGCCATCTTGTATATCTTCATCTACTTTATCAGAGTGTTATAGATGAACTATAAACCAAACTCGACAAGGAAACGtggacagtatatatatatatatatatataccctatTACACTTCCATGATGTCACagctttgttgtggtgtatttctGAAAGTGCTAATAGACAACAGCACACTGACATGCACTCATTTCCTCCATTTGGAGGGCTTGGAGATGATTTTATACCTGATCATTTTTTATCTTACGATGTTAGTTTGGTTGGGAAACCTACAActgtaatgtaaaaaaagaaaagaaaccaGCACACCCATTTCAACTAATTTATTCCTGTTAAATACTATGGGTAATCATTTATGAAGAAGTTCACTCAGGAAGCAGAACATTGCAGTATGTATTGAAATGTATATTGCAGTCTTACAACATGAGTAGACCAGAGAAATGAACACACAGGACATAGCCATAGACATCCGCAGATATTGGAGGCATATATTCAGAAGTATTCTAAGTGATGAAAATATCTCCATACTTTTGCATTACATTAAATAGTACAGTATACAAAATGGCATCTTGATTGAGCCATTCAAGGTTCTCTTTCAAACTGGAGCATGACTTGACCTGTGTAATGCATCTACTTTCTCCCTTGTCACTGTGAAACAGGCAACTGTCACATGCCAATATATTCAATAAATCATAACATCAG

Function

NR:

description
cytosolic non-specific dipeptidase-like isoform X1

GO: NA

KEGG:

id description
K08660 CNDP2; cytosolic nonspecific dipeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952901.1 False 2482 mRNA 0.48 11 43518422 43538399
XM_036952902.1 True 2542 mRNA 0.48 12 43518422 43539103

Neighbor

gene id symbol gene type direction distance location
LOC110496334 NA coding downstream 1013 43483421 ~ 43517409 (-)
LOC110496330 LOC106588299 coding downstream 260416 43228931 ~ 43258006 (-)
LOC110496326 NA coding downstream 512921 42995451 ~ 43005501 (-)
LOC118936491 LOC106588302 coding downstream 552406 42895031 ~ 43015119 (-)
LOC110496317 LOC106588307 coding downstream 652189 42858871 ~ 42866233 (-)
LOC110496335 LOC106588256 coding upstream 14932 43554035 ~ 43560458 (-)
LOC118940978 NA coding upstream 22684 43561787 ~ 43566641 (-)
LOC118940979 NA coding upstream 28207 43567310 ~ 43571558 (-)
LOC118940980 NA coding upstream 32486 43571589 ~ 43576903 (-)
LOC118940981 NA coding upstream 38554 43577657 ~ 43584921 (-)
G1551087 LOC106562846 non-coding downstream 372078 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 397481 43120322 ~ 43120941 (-)
G1550866 NA non-coding downstream 425127 43093093 ~ 43093295 (-)
G1550861 NA non-coding downstream 432070 43085784 ~ 43086352 (-)
G1550800 NA non-coding downstream 564482 42943061 ~ 42953940 (-)
G1551599 NA non-coding upstream 58336 43597439 ~ 43598917 (-)
LOC118940987 NA non-coding upstream 91178 43624763 ~ 43668196 (-)
G1551623 NA non-coding upstream 135537 43674640 ~ 43706492 (-)
G1551725 NA non-coding upstream 371930 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 447426 43986529 ~ 43986759 (-)
G1550202 NA other downstream 1158794 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1202343 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 1846908 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 2609797 40902519 ~ 40908744 (-)
G1552768 LOC106588550 other upstream 1281660 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1508577 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1526031 45065134 ~ 45073340 (-)
G1553544 NA other upstream 2128258 45667361 ~ 45667740 (-)

Expression


Co-expression Network