LOC118940978


Basic Information

Item Value
gene id LOC118940978
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43561787 ~ 43566641 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951050.1
CAATCACAATTGAAGCTCCTACAGAAATCACAACTGTAGCTCTTATACCCCCCACAATTGCAACTTCAACTACAACTGTAGCATCACCTACAACAGCAACTgcagatgcttccaccaccacaagtgcagctcctactacatcAATCCCAACTGCAGGTCCAACTACCATTTTGACTACTAAGACAATCACAACTGAATCTCCTACAGAAATCACAACTGAAGCTCTTATGACCCCCACAATTGCAGCTTCTACTTCAACAACTGTTGCTCCCACGACAACAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACGCAACAGCAGCATCTACTACGTCAATcacaactgcaggtcctactaaCATTTTAACTCCAACGACAAGCACAACTGAGGCTCCTATAGACatcactactgtagctcctttgaaccccacaattgcaacttcttcttcaacaactgtagctccaacgATCACTACAACTGCAGAAGCTCCTACATTTACTACTGCATCCCCTAATGCAACCACAACAGAAGCTCcttctacaacaactgtagcgcCAATGACTTTAGGAACAACAGTCCCAACGGCAGCTAATTCCTCAACTGTAGCTCCTTCAATTCCAAtcccaactgcagctcctacaacaacaactCTTGCTCCTACGAACTCTACAACTTCAGCACACACTACTTTATTcacaactgcaggtcctactaccaTTTTACCTCcttcgacaaccacaacaacatccaCTACAACAACTGTTGCTCCTTCAATGTCAATctcaactgcaggtcctactaccaATTTAACTccaacgacaaccacaactgaagctctTACAGACatcacaactgtagctcctatgcCCCCCACAATTGCAACTTCAACTGCAGCATcacctacaacaacaactgcagatGCTTCCACAACCACAGGTGCAGCACTTACTACATCAATCTCAACTGCAGGGCCTACTACCATTGTGACTCCTAAGACAATCACAACTGAAGTTCCTACAGAAATCACAACTGTAGCTCTTATACCCCCCACAATTGCAACTTCAACTACAACTGTAGCATcacctacaacaacaactgcagatgcttccaccaccacaaGTGCAGCACCTACTACATCAATCccaactgcaggtcctactaccaTTTTGACTACTAAGACAATCACAACTGAATATCCTACAGAAATCACAACTGAAGCTCTTATGACCCCCACAATTGCAGCTTCTACTTCAACAACTGTTGCTCCCACGACAACAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACgcaacaacagcacctactacGTCAATcacaactgcaggtcctactaaCATTTTAACTCCAACGACAAGCACAACTGAGGCTCCTATAGACatcactactgtagctcctttgaaccccacaattgcaacttcttcttcaacaactgtagctccaacgATCACTACAACTGCAGaagctcctacaacaacaactgtagctgcttcTACATTTACTACTGCATcccctactgcaaccacaacagaagctccttctacaacaactgtagcaccAATGACTTTAGGAACAACAGTCCCAACGACAACTGCAGCTAATTCCTCAACTGTAGCTCCTTCAATGCCCAtcccaactgcagctcctacaacaacaactCTTGCTCATTCGACCTCTACAACTTCAGCACCCACTACTTTATTcacaactgcaggtcctactaccaTTTTACCTTCTTCGGCAACCACAACAACATCCACTACAACAACTGTTGATCCTTCAATGTCAATctcaactgcaggtcctactaccaATTTAACTccaacgacaaccacaactgaagctctTACAGACatcacaactgtagctcctatgcCCACCACAATTGCAACTTCAACTGCAGCATcacctacaacaacaactgcagatGCTTCCACAACCACAGGTGCAACACTTACTACATCCATctcaactgcaggtcctactaccaTTTTGACTCCTAAGACAATCACAACTGAAGCTCCTACAGAAATCACCACTGTAGCTCTTATACCCCCCACAATTGCAACTTCAACTGTAGCATcacctacaacaacaactgcagatgcttccaccaccacaaGTGCAGCACCTACTACATCAATCCCAACTGCAGGTCCAACTACCATTTTGACTACTAAGACAATCACAACTGAATCTCCTACAGAAATCACAACTGAAGCTCTTATGACCCCCACAATTGCAGCTTCTACTTCAACAACTGTTGCTCCCACGACAACAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACGCAACAGCAGCAACTACTACGTCAATcacaactgcaggtcctactaaCATTTTAACTCCAACGACAAGCACAACTGAGGCTCCTATAGACatcactactgtagctcctttgaaccccacaattgcaacttcttcttcaacaactgtagctccaacgATCACTACAACTGCAGAAGCTCCTACATTTACTACTGAATCCCCTAATGCAACCACAACAGAAGCTCcttctacaacaactgtagcaccAATGACTTTAGGAACAACAGTCCCAACGGCTTCTAATTCCTCAACTGTAGCTCCTTCAATGCCAATCCCAACTGCAGCTCATACAACAACAACTCTTGCTCCTACGAACTCTACAACTTCAGCACACACTACTTTATTcacaactgcaggtcctactaccaTTTTACCTCcttcgacaaccacaacaacatccaCTACAACAACTGTTGCTCCTTCAATGTCAATctcaactgcaggtcctactaccaATTTaactccaactacaaccacaactgaagctctTACAGACatcacaactgtagctcctatgcCCCCCACAATTGCAACTTCAACTGCAGCATcacctacaacaacaactgcagatGCTTCCACAACCGAAGGTGCAGCACCTACTACATCAATCAtaactgcaggtcctactaccaTTTTGACTACTAAGACAATCACAACTGAATCTCCTACAAAAatcacaactgtagctcctatCTTCTACTTCAACAACTGTTGCTCCCACGACCACAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACGCAACAGCAGCAACTACTACGTCAATCACAACTGCAGCTTCTACTTCAACAACTGTTGCTCCCACGACCACAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACGCAACAGCAGCAACTACTACGTCAATCACAACTGCAGGTCCTACAAACATTTTACCTACAACGACAAGCACAACTGA

Function

NR:

description
mucin-19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951050.1 True 3377 mRNA 0.45 3 43561787 43566641

Neighbor

gene id symbol gene type direction distance location
LOC110496335 LOC106588256 coding downstream 1329 43554035 ~ 43560458 (-)
LOC110496332 LOC106588296 coding downstream 22684 43518422 ~ 43539103 (-)
LOC110496334 NA coding downstream 44378 43483421 ~ 43517409 (-)
LOC110496330 LOC106588299 coding downstream 303781 43228931 ~ 43258006 (-)
LOC110496326 NA coding downstream 556286 42995451 ~ 43005501 (-)
LOC118940979 NA coding upstream 669 43567310 ~ 43571558 (-)
LOC118940980 NA coding upstream 4948 43571589 ~ 43576903 (-)
LOC118940981 NA coding upstream 11016 43577657 ~ 43584921 (-)
LOC118940982 NA coding upstream 18294 43584935 ~ 43595178 (-)
LOC118941171 NA coding upstream 28895 43595536 ~ 43596702 (-)
G1551087 LOC106562846 non-coding downstream 415443 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 440846 43120322 ~ 43120941 (-)
G1550866 NA non-coding downstream 468492 43093093 ~ 43093295 (-)
G1550861 NA non-coding downstream 475435 43085784 ~ 43086352 (-)
G1550800 NA non-coding downstream 607847 42943061 ~ 42953940 (-)
G1551599 NA non-coding upstream 30798 43597439 ~ 43598917 (-)
LOC118940987 NA non-coding upstream 63640 43624763 ~ 43668196 (-)
G1551623 NA non-coding upstream 107999 43674640 ~ 43706492 (-)
G1551725 NA non-coding upstream 344392 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 419888 43986529 ~ 43986759 (-)
LOC118936491 LOC106588302 other downstream 546668 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1202159 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1245708 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 1890273 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 2653162 40902519 ~ 40908744 (-)
G1552768 LOC106588550 other upstream 1254122 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1481039 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1498493 45065134 ~ 45073340 (-)
G1553544 NA other upstream 2100720 45667361 ~ 45667740 (-)

Expression


Co-expression Network