LOC118940979


Basic Information

Item Value
gene id LOC118940979
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43567310 ~ 43571558 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951051.1
CTACAACTGTAGCATcacctacaacaacaactgcagatgcttccaccaccacaaGTGCAGCACCTACTACATCAATCccaactgcaggtcctactaccaTTTTGACTACTAAGACAATCACAACTGAATATCCTACAGAAATCACAACTGAAGCTCTTATGACCCCCACAATTGCAGCTTCTACTTCAACAACTGTTGCTCCCACGACAACAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACgcaacaacagcacctactacGTCAATcacaactgcaggtcctactaaCATTTTAACTCCAACGACAAGCACAACTGAGGCTCCTATAGACatcactactgtagctcctttgaaccccacaattgcaacttcttcttcaacaactgtagctccaacgATCACTACAACTGCAGAAGCTTCTacaacaacaactgtagctgcttcTACATTTACTACTGCATcccctactgcaaccacaacagaagctccttctacaacaactgtagcaccAATGACTTTAGGAACAACAGTCCCAACGACAACTGCAGCTAATTCCTCAACTGTAGCTCCTTCAATGCCAAtcccaactgcagctcctacaacaacaactCTTGCTCATTCGACCTCTACAACTTCAGCACCCACTACTTTATTcacaactgcaggtcctactaccaTTTTACCTCcttcgacaaccacaacaacatccaCCACAACAACTGTTGCTCCTTCAATGTCAATctcaactgcaggtcctactaccaATTTAACTccaacgacaaccacaactgaagctctTACAGACatcacaactgtagctcctatgcCCCCCACAATTGCAACTTCAACTGCAGCATcacctacaacaacaactgcagatGCTTCCACAATCACAGGTGCAGCACTTACTACATCAATctcaactgcaggtcctactaccaTTTTGACTCCTAAGACAATCACAACTGAAGCTCCTACAGAAATCACAACTGTAGCTCTTATACCCCCCACAATTGCAGCTTCTACTTCAACAACTGTTGCTCCCACGACATCAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACGCAACAGCAGCATCTACTACGTCAATcacaactgcaggtcctactaaCATTTTAACTCCAACGACAAGCACAACTGAGGCTCCTATAGACatcactactgtagctcctttgaaccccacaattgcaacttcttcttcaacaactgtagctccaacgATCACTACAACTGCAGaagctcctacaacaacaactgtagctgcttcTACATTTACTACTGCATcccctactgcaaccacaacagaagctccttctacaacaactgtagcaccAATGACTTTAGGAACAACAGTCCCAACGACAACTGCAGCTAATTCCTCAACTGTAGCTCCTTCAATGCCAAtcccaactgcagctcctacaacaacaactCTTGCTCATTCAACCTCTACAACTTCAGCACCCACTACTTTATTcacaactgcaggtcctactaccaTTTTACCTCcttcgacaaccacaacaacatccaATACAACAACTGTTGATCCTTCAATGTCAATctcaactgcaggtcctactaccaATTTAACTccaacgacaaccacaactgaagctctTACAGACatcacaactgtagctcctatgcCCCCCACAATTGCAACTTCAACTGCAGCATcacctacaacaacaactgcagatGCTTCCACAACCACAGGTGCAACACTTACTACATCAATctcaactgcaggtcctactaccaTTTTGACTCCTAAGACAATCACAATTGAAGCTCCTACAGAAATCACAACTGTAGCTCTTATACCCCCCACAATTGCAACTTCAACTACAACTGTAGCATCACCTACAACAGCAACTgcagatgcttccaccaccacaagtgcagctcctactacatcAATCCCAACTGCAGGTCCAACTACCATTTTGACTACTAAGACAATCACAACTGAATCTCCTACAGAAATCACAACTGAAGCTCTTATGACCCCCACAATTGCAGCTTCTACTTCAACAACTGTTGCTCCCACGACAACAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACGCAACAGCAGCATCTACTACGTCAATcacaactgcaggtcctactaaCATTTTAACTCCAACGACAAGCACAACTGAGGCTCCTATAGACatcactactgtagctcctttgaaccccacaattgcaacttcttcttcaacaactgtagctccaacgATCACTACAACTGCAGAAGCTCCTACATTTACTACTGCATCCCCTAATGCAACCACAACAGAAGCTCcttctacaacaactAAATCACAACTCTTCTACTTCAACAACTGTTGCTCCCACGACAACAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACgcaacaacagcacctactacGTCAATcacaactgcagCTTCTACTTCAACAACTGTTGCTCCCACGACAACAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACgcaacaacagcacctactacGTCAATcacaactgcaggtcctactaa

Function

NR:

description
mucin-19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951051.1 True 2648 mRNA 0.45 4 43567310 43571558

Neighbor

gene id symbol gene type direction distance location
LOC118940978 NA coding downstream 669 43561787 ~ 43566641 (-)
LOC110496335 LOC106588256 coding downstream 6852 43554035 ~ 43560458 (-)
LOC110496332 LOC106588296 coding downstream 28207 43518422 ~ 43539103 (-)
LOC110496334 NA coding downstream 49901 43483421 ~ 43517409 (-)
LOC110496330 LOC106588299 coding downstream 309304 43228931 ~ 43258006 (-)
LOC118940980 NA coding upstream 31 43571589 ~ 43576903 (-)
LOC118940981 NA coding upstream 6099 43577657 ~ 43584921 (-)
LOC118940982 NA coding upstream 13377 43584935 ~ 43595178 (-)
LOC118941171 NA coding upstream 23978 43595536 ~ 43596702 (-)
LOC118940983 NA coding upstream 26982 43598540 ~ 43603485 (-)
G1551087 LOC106562846 non-coding downstream 420966 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 446369 43120322 ~ 43120941 (-)
G1550866 NA non-coding downstream 474015 43093093 ~ 43093295 (-)
G1550861 NA non-coding downstream 480958 43085784 ~ 43086352 (-)
G1550800 NA non-coding downstream 613370 42943061 ~ 42953940 (-)
G1551599 NA non-coding upstream 25881 43597439 ~ 43598917 (-)
LOC118940987 NA non-coding upstream 58723 43624763 ~ 43668196 (-)
G1551623 NA non-coding upstream 103082 43674640 ~ 43706492 (-)
G1551725 NA non-coding upstream 339475 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 414971 43986529 ~ 43986759 (-)
LOC118936491 LOC106588302 other downstream 552191 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1207682 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1251231 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 1895796 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 2658685 40902519 ~ 40908744 (-)
G1552768 LOC106588550 other upstream 1249205 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1476122 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1493576 45065134 ~ 45073340 (-)
G1553544 NA other upstream 2095803 45667361 ~ 45667740 (-)

Expression


Co-expression Network