LOC118940982


Basic Information

Item Value
gene id LOC118940982
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43584935 ~ 43595178 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951054.1
actgaagcttcttctaaAACGActacagcacctacgacaaccacaacaatctCCCCTtcgacaactgtagctccaacaACGCCCATCACAACCGAAGGTCCTACTACCATTTtaactcctacgacaaccacaactgtagcaCCTACGACAAAGACAACAACATCCTTttcgacaactgcagctccaacaacTGTAGTTCCTACAACGCCAATCAAAACTGCAGGACCTACTACCATTGTAAGTCCTACGACAAACACAAATGTAGCTCCTACAGCAACCACAACAGCAGCTAGTACAACAAATGTAGCTCCAACgatcactacaactgcagcagcaCCAACTGTAGCTGCATCCACAACCACTACTGCAGCCCCTATGGCAACAACAACTCTAGCTACAATAGCAAGCACAACAGTAGctgctacgacaaccactgcCGCTTCTATAACATCTACAACAAGCGCAACAGTAACCCCTACGGCAACAACTACAGCTTCTTCTACGACAAAAATTGTAGATCCTGCGACCACCACAAATGATGCAGCTACTACAACAACCGCAGCTCCTACAACTCCAACTGTAGCTTCTTCCACAAGGACAAGTGAAGcccctactgcaaccacaacaGAAGCTTATTCTACAACAGCTGTAGAAACTACGACGACCACAACAGCAtcccctacgacaactgcagctcctactacaaccaccGGAGCTCCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactgaagctgcttccacaagcactaCTGCAGCCACTACTGCAACCACAACAGAAGCTTATTCTACAACAACTGTAGAaactacaactaccacaacaacatcccctacgacaactgcagctcctactacaaccaccGGAGCACCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactgaagCTGCTTCCACAAGCAATACTGCAGcccctactgcaaccacaactgaagcttctAACTGCAGCTCCTACtgcaacaactgtagctccaacaACGCCAATCACAACTGCAGGTCATACTACCATTTTAACTCCTACAGCAACCACAACAGCAGCTActgcttccACAACCACGACTGCATTCCCTACTGCAACAACAACTGTagcttcttctacaacaactgtagcaacTGCGACAACCATGAAAACATCCCCTTcgacaactgcagctgctactataACAATTGTAGCACCTGCAACGTCATTCACAAATGCACTTCCTACTACCATTTTAACTCCTACGACAACCAAAAcagcagctcctacgacaacaaCTCTAGCTCCTACAACCGCTACAACCTCAGCACCGACTACATCAATCACAACTGCAGcccctactgcaaccacaacaacagctccTACTACAGCTGTAGCACCTATAACCACAACAGCAGCTACTACAATACCTGTAGCTCCTACAACCACTACAGCACTTACTACGTCAATCAtaacaactgtagctccttcaATGCcaatcacaactacagctcctacaacaacaactCTTGCTCCTACAACCTCTACAACTTCAGCACCCACTACGTCATTCACAACTGCAGGACCTACTACCAATTTACCTCcttcgacaaccacaacaacatccactacaacaactgtagctcctacaatGTCAATCTCAACTGCAGATTCAACTGCATCAACTGTTGCTCCTACGACCACAACTGCAGCAGCTCCAataacaacaactgtagctgcttccATAAACGCAACAGCAGCATCTACTACGTCAATcacaactgcagCTCCTTCAATGCCAAtcccaactgcagctcctacaacaacaactCTTGCTCCTACGAACTCTACAACTTCAGCACACACTACTTTATTcacaactgcaggtcctactaccaTTTTACCTCcttcgacaaccacaacaacatccaCTACAACAACTGTTGCTCCTTCAATGTCAATctcaactgcagCTTCTACTTCAACAACTGTTGCTCCCACGACAACAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACGCAACAGCAGCACCTACTACATCAATCccaactgcagCTTCTACTTCAACAACTGTTGCTCCCACGACAACAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACGCAACAGCAGCATCTACTACGTCAATcacaactgcagCATcacctacaacaacaactgcagatgcttccaccaccacaaGTGCAGCACCTACTACATCAATCCCAACTGCAGCTTCTACTTCAACAACTGTTGCTCCCACGACAACAACTGCAGCAGCTCCTataacaacaactgtagctgcttccATAAACGCAACAGCAGCATCTACTACGTCAATcacaactgcaggtcctactaa

Function

NR:

description
mucin-19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951054.1 True 2424 mRNA 0.47 10 43584935 43595178

Neighbor

gene id symbol gene type direction distance location
LOC118940981 NA coding downstream 14 43577657 ~ 43584921 (-)
LOC118940980 NA coding downstream 8032 43571589 ~ 43576903 (-)
LOC118940979 NA coding downstream 13377 43567310 ~ 43571558 (-)
LOC118940978 NA coding downstream 18294 43561787 ~ 43566641 (-)
LOC110496335 LOC106588256 coding downstream 24477 43554035 ~ 43560458 (-)
LOC118941171 NA coding upstream 358 43595536 ~ 43596702 (-)
LOC118940983 NA coding upstream 3362 43598540 ~ 43603485 (-)
LOC118940984 NA coding upstream 9146 43604324 ~ 43607758 (-)
LOC118940985 NA coding upstream 13027 43608205 ~ 43610335 (-)
LOC118940986 NA coding upstream 19496 43614674 ~ 43622823 (-)
G1551087 LOC106562846 non-coding downstream 438591 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 463994 43120322 ~ 43120941 (-)
G1550866 NA non-coding downstream 491640 43093093 ~ 43093295 (-)
G1550861 NA non-coding downstream 498583 43085784 ~ 43086352 (-)
G1550800 NA non-coding downstream 630995 42943061 ~ 42953940 (-)
G1551599 NA non-coding upstream 2261 43597439 ~ 43598917 (-)
LOC118940987 NA non-coding upstream 35103 43624763 ~ 43668196 (-)
G1551623 NA non-coding upstream 79462 43674640 ~ 43706492 (-)
G1551725 NA non-coding upstream 315855 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 391351 43986529 ~ 43986759 (-)
LOC118936491 LOC106588302 other downstream 569816 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1225307 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1268856 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 1913421 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 2676310 40902519 ~ 40908744 (-)
G1552768 LOC106588550 other upstream 1225585 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1452502 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1469956 45065134 ~ 45073340 (-)
G1553544 NA other upstream 2072183 45667361 ~ 45667740 (-)

Expression


Co-expression Network