LOC118941171


Basic Information

Item Value
gene id LOC118941171
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43595536 ~ 43596702 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952903.1
GCAACCACGACTAGAGCTTCTTCCACAACCACTACTGAGGCACTTATTGCAACCACAATTGaagcttcttctacaacaactactgcagcccttactggaaccacaactgaagcttcttctaaaacaactatagcacctacgacaacatcccctttgacaactgcagctcctacaactccAACTGTAGCTTCTTCCACAAGGACAAGTGCAGcccctactgcaaccacaacaGAAGCTTCTTCTACAACAGCTGTAGAAACTAAGATGACCACAACAACAtcccctacgacaactgcagctcctactacaaccaccGGAGCTCCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactgaagctgcttccacaagcactaCTGCAGCCACTACTGCAACCACAACAGAAGCTTATTCTACAACAACTGTAGAaactacaactaccacaacaacatcccctacgacaactgcagctcctactacaaccaccGGAGCACCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactgaagCTGCTTCTACAAGCAATACTGCAGcccctactgcaaccacaactgaagcttcttcaacaacaactatagcacctacgacaacatcccctttgacaactgcagctcctactacaacaactgtagctgcttccacaaccactactgcaTTACCTATTGCAACCACGACTGCAGCTTCTTCAACAACCACTACTGAGGCCCTTACTGCAACCACAATTGaagcttcttctacaacaactactgcagcccttactggaaccacaactgaagcttcttctaaaacaactatatcacctacgacaaccacaacaatctCCCcttcaacaactgtagctccaacaACAACTGAAGGTCCTACTACCATTTTAACTCCTACGACAACAACAACTGTAGCATCTACAGCAACCACAACAGAAGCTTCTTCTACAACAGCTGTAGAAACTACGACGACCACAACAACAtcccctacgacaactgcagctcctactacaaccaccGGAGCTCCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactgaagctgcttccacaagcactactgcagcccctactgcaaccacaactgaagcttcttctacaacaactatagcacct

Function

NR:

description
mucin-5AC-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952903.1 True 1167 mRNA 0.47 1 43595536 43596702

Neighbor

gene id symbol gene type direction distance location
LOC118940982 NA coding downstream 358 43584935 ~ 43595178 (-)
LOC118940981 NA coding downstream 10615 43577657 ~ 43584921 (-)
LOC118940980 NA coding downstream 18633 43571589 ~ 43576903 (-)
LOC118940979 NA coding downstream 23978 43567310 ~ 43571558 (-)
LOC118940978 NA coding downstream 28895 43561787 ~ 43566641 (-)
LOC118940983 NA coding upstream 1838 43598540 ~ 43603485 (-)
LOC118940984 NA coding upstream 7622 43604324 ~ 43607758 (-)
LOC118940985 NA coding upstream 11503 43608205 ~ 43610335 (-)
LOC118940986 NA coding upstream 17972 43614674 ~ 43622823 (-)
LOC118940987 NA coding upstream 28061 43624763 ~ 43668196 (-)
G1551087 LOC106562846 non-coding downstream 449192 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 474595 43120322 ~ 43120941 (-)
G1550866 NA non-coding downstream 502241 43093093 ~ 43093295 (-)
G1550861 NA non-coding downstream 509184 43085784 ~ 43086352 (-)
G1550800 NA non-coding downstream 641596 42943061 ~ 42953940 (-)
G1551599 NA non-coding upstream 737 43597439 ~ 43598917 (-)
G1551623 NA non-coding upstream 77938 43674640 ~ 43706492 (-)
G1551725 NA non-coding upstream 314331 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 389827 43986529 ~ 43986759 (-)
LOC118936491 LOC106588302 other downstream 580417 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1235908 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1279457 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 1924022 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 2686911 40902519 ~ 40908744 (-)
G1552768 LOC106588550 other upstream 1224061 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1450978 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1468432 45065134 ~ 45073340 (-)
G1553544 NA other upstream 2070659 45667361 ~ 45667740 (-)

Expression


Co-expression Network