LOC118940983


Basic Information

Item Value
gene id LOC118940983
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43598540 ~ 43603485 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951055.1
ATGGCAACAACAACTCTAGCTACAATAGCAAGCACAACAGTAGctgctacgacaaccactgcCGCTTCTATAACATCTACAACAAGCGCAACAGTAACCCCTACGGCAACAACTACAGCTTCTTCTACGACAAAAATTGTAGATCCTGTGACCACCACAAATGATGCAGCTACTACAACAACCGCAGCTCCTACAATTCCAACTGTAGCTTCTTCCACAAGGACAAGTACAGCCCCTACTGGAACCACAACAGAAGCTTCTTCTATAACAGCTGTAGAAACTACGACGACCACAACAACAtcccctacgacaactgcagctcctactacaaccaccGGAGCTCCTACGGACACTTCAACAGCAGCagctcttacaacaacaactgaagctgcttccacaagcactaCTGCAGCCACTACTGCAACCACAACAGAAGCTTATTCTACAACAACTGTAGAaactacaactaccacaacaacatcccctacgacaactgcagctcctactacaaccaccGGAGCACCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactgaagCTGCTTCGACAAGCACTACTGCAGcccctactgcaaccacaactgaagcttcttctacaacaactacagcacctacgacaaccacaacaatctCCCCTtcgacaactgtagctccaacaACGCCAATCACAACCGAAGGTCCTACTACCATTTtaactcctacgacaaccacaactgtagcaCCTACGACAAAGACAACAACATCCTTttcgacaactgcagctccaacaacTGTAGTTCCTACAACGCCAATCAAAACTGCAGGACCTACTACCATTGTAAGTCCTACGACAAACACAAATGTAGCTCCTACAGCAACCACAACAGCAGCTAGTACAACAAATGTAGCTCCAACgatcactacaactgcagcagcaCCAACTGTAGCTGCATCCACAACCACTACTGCAGCCCCTATGGCAACAACAACTCTAGCTACAATAGCAAGCACAACAGTAGCTGCTCCGACAACCACTGCCGCTTCTATAACATCTACAACAAGCGCAACAGTAACCCCTACGGCAACAACTACAGCTTCTTCTACGACAAAAATTGTAGATCCTGCGACCACCACAAATGATGCAGCTACTACAACAACCGCAGCTCCTACAACTCCAACTGTAGCTTCTTCCACAAGGACAAGTGAAGcccctactgcaaccacaacaGAAGCTTATTCTACAACAGCTGTAGAAACTACGACGACCACAAAAACATaccctacgacaactgcagctcctactacaaccaccGGAGCTCCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactgaagctgcttccacaagcactaCTGCAGCCACAACTGCAACCACAACAGAAGCTTATTCTACAACAACTGTAGAaactacaactaccacaacaacatcccctacgaaaactgcagctcctactacaaccaccGGAGCACCTACGctcctactacaacaactcacctacgacaacGACAACAATCTCCCcttcaacaactgtagctccaacaACGCCAATCACAACCGAAGGTCCTACTACCATTTtaactcctacgacaaccacaactgtagcaCCTACGACAAAGACAACAACATCCTTttcgacaactgcagctccaacaacTGTAGTTCCTACAACGCCAATCAAAACTGCAGGACCTACTACCATTGTAAGTCCTACGACAAACACAAATGTAGCTCCTACAGCAACCACAACAGCAGCTAcacctacgacaaccacaacaatctCCCCTtcgacaactgtagctccaacaACGCCCATCACAACCGAAGGTCCTACTACCATTTtaactcctacgacaaccacaactgtagcaCCTACGACAAAGACAACAACATCCTTttcgacaactgcagctccaacaacTGTAGTTCCTACAACGCCAATCAAAACTGCAGGACCTACTACCATTGTAAGTCCTACGACAAACACAAATGTAGCTCCTACAGCAACCACAACAGCAGCTActcctacaactccAACTGTAGCTTCTTCCACAAGGACAAGTGCAGcccctactgcaaccacaacaGAAGCTTCTTCTATAACAGCTGTAGAAACTACGATGACCACAACAACAtcccctacgacaactgcagctcctactacaaccaccGGAGCTCCTACGGCCACTTCAACAGCAGCAGCTCTTACAACATCAACTGa

Function

NR:

description
mucin-19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951055.1 True 2256 mRNA 0.47 5 43598540 43603485

Neighbor

gene id symbol gene type direction distance location
LOC118941171 NA coding downstream 1838 43595536 ~ 43596702 (-)
LOC118940982 NA coding downstream 3362 43584935 ~ 43595178 (-)
LOC118940981 NA coding downstream 13619 43577657 ~ 43584921 (-)
LOC118940980 NA coding downstream 21637 43571589 ~ 43576903 (-)
LOC118940979 NA coding downstream 26982 43567310 ~ 43571558 (-)
LOC118940984 NA coding upstream 839 43604324 ~ 43607758 (-)
LOC118940985 NA coding upstream 4720 43608205 ~ 43610335 (-)
LOC118940986 NA coding upstream 11189 43614674 ~ 43622823 (-)
LOC118940987 NA coding upstream 21278 43624763 ~ 43668196 (-)
LOC110496830 NA coding upstream 158200 43761685 ~ 43762658 (-)
G1551087 LOC106562846 non-coding downstream 452196 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 477599 43120322 ~ 43120941 (-)
G1550866 NA non-coding downstream 505245 43093093 ~ 43093295 (-)
G1550861 NA non-coding downstream 512188 43085784 ~ 43086352 (-)
G1550800 NA non-coding downstream 644600 42943061 ~ 42953940 (-)
G1551623 NA non-coding upstream 71155 43674640 ~ 43706492 (-)
G1551725 NA non-coding upstream 307548 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 383044 43986529 ~ 43986759 (-)
G1551893 NA non-coding upstream 383340 43986825 ~ 43987035 (-)
LOC118936491 LOC106588302 other downstream 583421 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1238912 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1282461 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 1927026 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 2689915 40902519 ~ 40908744 (-)
G1552768 LOC106588550 other upstream 1217278 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1444195 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1461649 45065134 ~ 45073340 (-)
G1553544 NA other upstream 2063876 45667361 ~ 45667740 (-)

Expression


Co-expression Network