LOC118940984


Basic Information

Item Value
gene id LOC118940984
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43604324 ~ 43607758 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951056.1
ttcttctaaaacaactatagcacctacgacaacatcccctttgacaactgcagctcctacaacaacaactgaagctgcttccacaagcactaCTTCAGCCCCTACTGCAACCACAGCTGAAGCTTattctacaacaactactgcagcccttactggaaccacaactgaagcttcttctaaaacaactacagcacctacgacaaccacaacaatctCCCCTtcgacaactgtagctccaacaACGCCAATCACAACCGAAGGTCCTACTACCATTTtaactcctacgacaaccacaactgtagcaCCTACGACAAAGACAACAACATCCTTttcgacaactgcagctccaacaacTGTAGTTCCTACAACGCCAATCAAAACTGCAGGACCTACTACCATTGTAAGTCCTACGACAAACACAAATGTAGCTCCTACAGCAACCACAACAGCAGCTAGTACAACAAATGTAGCTCCAACgatcactacaactgcagcagcaCCAACTGTAGCTGCATCCACAACCACTACTGCAGCCCCTATGGCAACAACAACTCTAGCTACAATAGCAAGCACAACAGTAGctgctacgacaaccactgcCGCTTCTATAAAATCTACAACAAGCGCAACAGTAACCCCTACGGCAACAACTACAGCTTCTTCTACGACAAAAATTGTAGATCCTGCGACCACCACAAATGATGCAGCTACTACAACAACCGCAGCTCCTACAATTCCAACTGTAGCTTCTTCCACAAGGACAAGTACAGCCCCTACTGGAACCACAACAGAAGCTTCTTCTATAACAGCTGTAGAAACTACGACGACCACAACAACAtcccctacgacaactgcagctcctactacaaccaccGGAGCTCCTACGGACACTTCAACAGCAGCagctcttacaacaacaactgaagctgcttccacaagcactaCTGCAGCCACTACTGCAACCACAACAGAAGCTTATTCTACAACAACTGTAGAaactacaacaaccacaacaacatcccctacgacaactgcagctcctactacaaccaccGGAGCACCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactgaagCTGCTTCGACAAGCACTACTGCAGcccctactgcaaccacaactgaagcttcttctacaacaactacagcacctacgacaaccacaacaatctCCCCTtcgacaactgtagctccaacaACGCCAATCACAACCGAAGGTCCTACTACCATTTtaactcctacgacaaccacaactgtagcaCCTACGACAAAGACAACAACATCCTTttcgacaactgcagctccaacaacTGTAGTTCCTACAACGCCAATCAAAACTGCAGGACCTACTACCATTGTAAGTCCTACGACAAACACAAATGTAGCTCCTACAGCAACCACAACAGCAGCTAGTACAACAAATGTAGCTCCAACgatcactacaactgcagcagcaccaactgtagctgcttccacaaccactactgcagcccctactgcaaccataactgaagcttcttctacaacaactatagcacctacgacaacatccccttcaacaactgcagctcctactacaacaactgtagctgcatCCACAACCACTACTGCAGCCCCTATGGCAACAACAACTCTAGCTACAATAGCAAGCACAACAGCAGCTGCTACAACAACCACTGCCGCTTCTATAACATCTACAACAAGCGCAACAGTAACCCCTACGGCAACAACTACAGCTTCTTCTACGACAAAAATTGTAGATCCTGCGACAACCACAAATGATGCAGCTACTACAAGAACCACAGCTCCTACAACTCCAACTGTAGCTTCTTCCACAAGGACAAGTGCAGcccctactgcaaccacaacaGAAGCTTCTTCTACAACAGCTGTAGAAACTACGACGACCACAACAACAtcccctacgacaactgcagctcctactacaaccaccGGAGCTCCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactgaagctgcttccacaagcactaCTGCAGCCACTACTGCAACCACAACAGAAGCTTATTCTACAACAACTGTAGAaactacaactaccacaacaacatcccctacgacaactgcagctcctactacaaccaccGGAGCACCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactgaagctgcttccacaagcactaCTGCAGCCCCTACTGCAACCATAACTGAAGCTTATTCTACAACAActatagcacctacgacaacatccccttcaacaactgcagctcctactacaacagctgtagctgcttccacaaccactactgcaTTACCTATTGCAACCAGGACTGCAGCTTCTTCCACAACTACTACTGAGGCCCttactgcaaccacaactgaagACAACAACATTCTTttcgacaactgcagctccaacaactgtagctcctacaacGCCAATCAAAACTGCAGGACCTACTACCATTGTAAGTCCTACAACAGACACAATCGTAGCTCCTACAGCAACCACAACAGCAGCTACTACTACAACAACCGCAGCTCCTACAATTCCAACTGTAGCTTCTTCCACAAGGACAAGTGCAGcccctactgcaaccacaacaGAAGCTTCTTCTATAACAGCTGTAGAAACTACGACGACCGCAACAACAtcccctacgacaactgcagctcctactacaaccaccGGAGCACCTATGGCCACTTCAACAGCAGCAGCTCATACAACAACAACTGA

Function

NR:

description
mucin-19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951056.1 True 2788 mRNA 0.47 3 43604324 43607758

Neighbor

gene id symbol gene type direction distance location
LOC118940983 NA coding downstream 839 43598540 ~ 43603485 (-)
LOC118941171 NA coding downstream 7622 43595536 ~ 43596702 (-)
LOC118940982 NA coding downstream 9146 43584935 ~ 43595178 (-)
LOC118940981 NA coding downstream 19403 43577657 ~ 43584921 (-)
LOC118940980 NA coding downstream 27421 43571589 ~ 43576903 (-)
LOC118940985 NA coding upstream 447 43608205 ~ 43610335 (-)
LOC118940986 NA coding upstream 6916 43614674 ~ 43622823 (-)
LOC118940987 NA coding upstream 17005 43624763 ~ 43668196 (-)
LOC110496830 NA coding upstream 153927 43761685 ~ 43762658 (-)
LOC118940988 NA coding upstream 157365 43765123 ~ 43769387 (-)
G1551599 NA non-coding downstream 5407 43597439 ~ 43598917 (-)
G1551087 LOC106562846 non-coding downstream 457980 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 483383 43120322 ~ 43120941 (-)
G1550866 NA non-coding downstream 511029 43093093 ~ 43093295 (-)
G1550861 NA non-coding downstream 517972 43085784 ~ 43086352 (-)
G1551623 NA non-coding upstream 66882 43674640 ~ 43706492 (-)
G1551725 NA non-coding upstream 303275 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 378771 43986529 ~ 43986759 (-)
G1551893 NA non-coding upstream 379067 43986825 ~ 43987035 (-)
LOC118936491 LOC106588302 other downstream 589205 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1244696 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1288245 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 1932810 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 2695699 40902519 ~ 40908744 (-)
G1552768 LOC106588550 other upstream 1213005 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1439922 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1457376 45065134 ~ 45073340 (-)
G1553544 NA other upstream 2059603 45667361 ~ 45667740 (-)

Expression


Co-expression Network