LOC118940985


Basic Information

Item Value
gene id LOC118940985
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43608205 ~ 43610335 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951057.1
ttcttctaaaacaactatagcacctacgacaacatcccctttgacaactgcagctcctacaacaacaactgaagctgcttccacaagcactaCTTCAGCCCCTACTGCAACCACAGCTGAAGCTTattctacaacaactactgcagcccttactggaaccacaactgaagcttcttctaaaacaactacagcacctacgacaaccacaacaatctCCCCTtcgacaactgtagctccaacaACGCCAATCACAACCGAAGGTCCTACTACCATTTtaactcctacgacaaccacaactgtagcaCCTACGACAAAGACAACAACATCCTTttcgacaactgcagctccaacaacTGTAGTTCCTACAACGCCAATCAAAACTGCAGGACCTACTACCATTGTAAGTCCTACGACAAACACAAATGTAGCTCCTACAGCAACCACAACAGCAGCTAGTACAACAAATGTAGGTCCAACgatcactacaactgcagcagcaCCAACTGTAGCTGCATCCACAACCACTACTGCAGCCCCTATGGCAACAACAACTCTAGCTACAATAGCAAGCACAACAGTAGctgctacgacaaccactgcCGCTTCTATAAAATCTACAACAAGCGCAACAGTAACCCCTACGGCAACAACTACAGCTTCTTCTACGACAAAAATTGTAGATCCTGCGACCACCACAAATGATGCAGCTACTACAACAACCGCAGCTCCTACAATTCCAACTGTAGCTTCTTCCACAAGGACAAGTACAGCCCCTACTGGAACCACAACAGAAGCTTCTTCTATAACAGCTGTAGAAACTACGACGACCACAACAACAtcccctacgacaactgcagctcctactacaaccaccGGAGCTCCTACGGACACTTCAACAGCAGCagctcttacaacaacaactgaagctgcttccacaagcactaCTGCAGCCACTACTGCAACCACAACAGAAGCTTATTCTACAACAACTGTAGAaactacaacaaccacaacaacatcccctacgacaactgcagctcctactacaaccaccGGAGCACCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactgaagCTGCTTCGACAAGCACTACTGCAGcccctactgcaaccacaactgaagcttcttctacaacaactacagcacctacgacaaccacaacaatctCCCCTtcgacaactgtagctccaacaACGCCAATCACAACCGAAGGTCCTACTACCATTTtaactcctacgacaaccacaactgtagcaCCTACGACAAAGACAACAACATCCTTttcgacaactgcagctccaacaacTGTAGTTCCTACAACGCCAATCAAAACTGCAGGACCTACTACCATTGTAAGTCCTACGACAAACACAAATGTAGCTCCTACAGCAACCACAACAGCAGCTAGTACAACAAATGTAGGTCCAACgatcactacaactgcagcagcaCCAACTGTAGCTGCATCCACAACCACTACTGCAGCCCCTATGGCAACAACAACTCTAGCTACAATAGCAAGCACAACAGTAGctgctacgacaaccactgcCGCTTCTATAAAATCTACAACAAGCGCAACAGTAACCCCTACGGCAACAACTACAGCTTCTTCTACGACAAAAATTGTAGATCCTGCGACCACCACAAATGATGCAGCTACTACAACAACCGCAGCTCCTACAATTCCAACTGTAGCTTCTTCCACAAGGACAAGTACAGCCCCTACTGGAACCACAACAGAAGCTTCTTCTATAACAGCTGTAGAAACTACGACGACCACAACAACAtcccctacgacaactgcagctcctactacaaccaccGGAGCTCCTACGGACACTTCAACAGCAGCagctcttacaacaacaactgaagctgcttccacaagcactaCTGCAGCCACTACTGCAACCACAACAGAAGCTTATTCTACAACAACTGTAGAaactacaactaccacaacaacatcccctacgacaactgcagctcctactacaaccaccGGAGCTCCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactgaagctgcttccacaagcactactgcagcccctactgcaaccaca

Function

NR:

description
mucin-19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951057.1 True 2131 mRNA 0.47 1 43608205 43610335

Neighbor

gene id symbol gene type direction distance location
LOC118940984 NA coding downstream 447 43604324 ~ 43607758 (-)
LOC118940983 NA coding downstream 4720 43598540 ~ 43603485 (-)
LOC118941171 NA coding downstream 11503 43595536 ~ 43596702 (-)
LOC118940982 NA coding downstream 13027 43584935 ~ 43595178 (-)
LOC118940981 NA coding downstream 23284 43577657 ~ 43584921 (-)
LOC118940986 NA coding upstream 4339 43614674 ~ 43622823 (-)
LOC118940987 NA coding upstream 14428 43624763 ~ 43668196 (-)
LOC110496830 NA coding upstream 151350 43761685 ~ 43762658 (-)
LOC118940988 NA coding upstream 154788 43765123 ~ 43769387 (-)
LOC118940989 NA coding upstream 161991 43772326 ~ 43780922 (-)
G1551599 NA non-coding downstream 9288 43597439 ~ 43598917 (-)
G1551087 LOC106562846 non-coding downstream 461861 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 487264 43120322 ~ 43120941 (-)
G1550866 NA non-coding downstream 514910 43093093 ~ 43093295 (-)
G1550861 NA non-coding downstream 521853 43085784 ~ 43086352 (-)
G1551623 NA non-coding upstream 64305 43674640 ~ 43706492 (-)
G1551725 NA non-coding upstream 300698 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 376194 43986529 ~ 43986759 (-)
G1551893 NA non-coding upstream 376490 43986825 ~ 43987035 (-)
LOC118936491 LOC106588302 other downstream 593086 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1248577 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1292126 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 1936691 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 2699580 40902519 ~ 40908744 (-)
G1552768 LOC106588550 other upstream 1210428 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1437345 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1454799 45065134 ~ 45073340 (-)
G1553544 NA other upstream 2057026 45667361 ~ 45667740 (-)

Expression


Co-expression Network