LOC118940986


Basic Information

Item Value
gene id LOC118940986
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43614674 ~ 43622823 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951058.1
acaacatcccctttgacaactgcagctcctactacaacaactgtagctgcttccacaaccactactgcaTTACCTATTGCAACCACGACTGCAGCTTCTTCCACAACCACTACTGAGGCCCttactgcaaccacaactgaaggttcttctacaactgcagcccttactggaaccacaactgaagcttcttctaaaacaactacagcacctacgacaaccacaacaatctCCCCTtcgacaactgtagctccaacaACGCCAATCACAACCGAAGcttcttctacaacaactactgcaacCCTTACTggaaccacaactgaagcttcttctaaaacaactatagcacctacgacaacatccccttcgacaactgcagctcctactacaacaactgtagctgcttccacaaccactactgcaTTACCTATTGCAACCACGACTGCAGCTTCTTCCACAACCACTACTGAGGCCCttactgcaaccacaactgaaggttcttctacaacaactactgcagcctcttctaaaacaactatagcacctacgacaacatcccctttgacaactgcagctcctacaacaacaactgaagctgcttccacaagcactaCTTCAGCCCCTACTGCAACCACAGCTGAAGCTTattctacaacaactactgcagcccttactggaaccacaactgaagcttcttctaaaacaactacagcacctacgacaaccacaacaatctCCCCTtcgacaactgtagctccaacaACGCCAATCACAACCGAAGGTCCTACTACCATTTtaactcctacgacaaccacaactgtagcaCCTACGACAAAGACAACAACATCCTTttcgacaactgcagctccaacaacTGTAGTTCCTACAACGCCAATCAAAACTGCAGGACCTACTACCATTGTAAGTCCTACGACAAACACAAATGTAGCTCCTACAGCAACCACAACAGCAGCTAGTACAACAAATGTAGCTCCAACgatcactacaactgcagcagcaCCAACTGTAGCTGCATCCACAACCACTACTGCAGCCCCTATGGCAACAACAACTCTAGCTACAATAGCAAGCACAACAGTAGctgctacgacaaccactgcCGCTTCTATAAAATCTACAACAAGCGCAACAGTAACCCCTACGGCAACAACTACAGCTTCTTCTACGACAAAAATTGTAGATCCTGCGACCACCACAAATGATGCAGCTACTACAAGAACCACAGCTCCTACAACTCCAACTGTAGCTTCTTCCACAAGGACAAGTGCAGcccctactgcaaccacaacagaagcttcttctacaacagcctactacaacaaccacagctcctaCAACTCCAACTGTAGCTTCTTCCACAAGGACAAGTGCAGcccctactgcaaccacaacaGAAGCTTCTTCTACAACAGCTGTAGAAACTACGACGACCACAACAACAtcccctacgacaactgcagctcctactacaaccaccGGAGCTCCTACGGCCACTTCAACAGCAGCagctcttacaacaacaactga

Function

NR:

description
mucin-19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951058.1 True 1545 mRNA 0.47 5 43614674 43622823

Neighbor

gene id symbol gene type direction distance location
LOC118940985 NA coding downstream 4339 43608205 ~ 43610335 (-)
LOC118940984 NA coding downstream 6916 43604324 ~ 43607758 (-)
LOC118940983 NA coding downstream 11189 43598540 ~ 43603485 (-)
LOC118941171 NA coding downstream 17972 43595536 ~ 43596702 (-)
LOC118940982 NA coding downstream 19496 43584935 ~ 43595178 (-)
LOC118940987 NA coding upstream 1940 43624763 ~ 43668196 (-)
LOC110496830 NA coding upstream 138862 43761685 ~ 43762658 (-)
LOC118940988 NA coding upstream 142300 43765123 ~ 43769387 (-)
LOC118940989 NA coding upstream 149503 43772326 ~ 43780922 (-)
LOC118940990 NA coding upstream 158450 43781273 ~ 43789565 (-)
G1551599 NA non-coding downstream 15757 43597439 ~ 43598917 (-)
G1551087 LOC106562846 non-coding downstream 468330 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 493733 43120322 ~ 43120941 (-)
G1550866 NA non-coding downstream 521379 43093093 ~ 43093295 (-)
G1550861 NA non-coding downstream 528322 43085784 ~ 43086352 (-)
G1551623 NA non-coding upstream 51817 43674640 ~ 43706492 (-)
G1551725 NA non-coding upstream 288210 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 363706 43986529 ~ 43986759 (-)
G1551893 NA non-coding upstream 364002 43986825 ~ 43987035 (-)
LOC118936491 LOC106588302 other downstream 599555 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1255046 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1298595 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 1943160 41663436 ~ 41671516 (-)
LOC118941164 LOC106588367 other downstream 2706049 40902519 ~ 40908744 (-)
G1552768 LOC106588550 other upstream 1197940 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1424857 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1442311 45065134 ~ 45073340 (-)
G1553544 NA other upstream 2044538 45667361 ~ 45667740 (-)

Expression


Co-expression Network