LOC110496830


Basic Information

Item Value
gene id LOC110496830
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43761685 ~ 43762658 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037491.1
GAAACCACTTTCATATCTATGTTCTAGTTTATAATCcccctaaaatgtatttaaatgtgtATTCTAGGTCTCCTAACAACCACGGTTGCCCCAACAACTACCAGCACCTCACCACTTCCAACCCTTTTGCTGACCACTACTTTCAATACCACAAGTAATGAAGGTTTTCCTGGCTGGGCTCTGGCCATTATCATCCCCTGTGGCATCGCTATCATTCTGGTACCCCTGTGGATCCTGCTATGTTGCATGCTATGTGGCTGTTGTGCAGCTGTAAGGAGACGCTGGCACAGACGTAGATCTTACAATGTACAGTACACCACCAGAAACGGTTTCTTCTGAGGTGACAACGCTAACATCTGTGGGCAACTGTCATCACAAGAACAACCAATCATCTATATCTGCTAATCACGGGACTTTAATGCATGGAAAATTCCTTGTTACTACATACAATTGCATCTGAAAAGATCAAGTGGGGAGTTGCATATATTTTATCATAAAAATAAAATTGATAATGGGCTTAATAGGCCACATGTTTTTTGTGCAATGTACTACGTTTTATATTATAGATATATGATTGTTAATCAAAGTTACAGCTGAGCTGAACATggaatgtttatatatttattagcTATGTCATTTGTGGTTTCAAGCTGTGCTATCCACTTACTAAAACATTTATCActtatttatttaatgtgtaaTAAGCTAGATTACAATATTTATTTGATTTTTGTTATTAACTCTCTTGATTAACTATGAACtattttattttaaactgcaataCAGTACTTGTTTCTTCAACTTACAGTTTGACAAATGTAATAAAAAGTATTTACAAACCA

Function

NR:

description
mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037491.1 True 842 mRNA 0.36 2 43761685 43762658

Neighbor

gene id symbol gene type direction distance location
LOC118940987 NA coding downstream 93489 43624763 ~ 43668196 (-)
LOC118940986 NA coding downstream 138862 43614674 ~ 43622823 (-)
LOC118940985 NA coding downstream 151350 43608205 ~ 43610335 (-)
LOC118940984 NA coding downstream 153927 43604324 ~ 43607758 (-)
LOC118940983 NA coding downstream 158200 43598540 ~ 43603485 (-)
LOC118940988 NA coding upstream 2465 43765123 ~ 43769387 (-)
LOC118940989 NA coding upstream 9668 43772326 ~ 43780922 (-)
LOC118940990 NA coding upstream 18615 43781273 ~ 43789565 (-)
LOC118940991 NA coding upstream 28617 43791275 ~ 43794053 (-)
LOC118940992 NA coding upstream 51291 43813949 ~ 43858805 (-)
G1551623 NA non-coding downstream 55193 43674640 ~ 43706492 (-)
G1551599 NA non-coding downstream 162768 43597439 ~ 43598917 (-)
G1551087 LOC106562846 non-coding downstream 615341 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 640744 43120322 ~ 43120941 (-)
G1551725 NA non-coding upstream 148375 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 223871 43986529 ~ 43986759 (-)
G1551893 NA non-coding upstream 224167 43986825 ~ 43987035 (-)
LOC110496339 mterf1 non-coding upstream 249949 44010012 ~ 44012891 (-)
G1551935 NA non-coding upstream 287707 44050365 ~ 44050741 (-)
LOC118936491 LOC106588302 other downstream 746566 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1402057 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1445606 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 2090171 41663436 ~ 41671516 (-)
G1552768 LOC106588550 other upstream 1058105 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1285022 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1302476 45065134 ~ 45073340 (-)
G1553544 NA other upstream 1904703 45667361 ~ 45667740 (-)
G1553693 LOC106588587 other upstream 2025441 45788099 ~ 45803048 (-)

Expression


Co-expression Network