LOC118940989


Basic Information

Item Value
gene id LOC118940989
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43772326 ~ 43780922 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951061.1
gcagcacctacgacaactggagcacctactacgacaactgcagcacctGCTCCTACAACAGCTACAACTGCAGCAACTACTACAACTGAAGCCCCGACAACAACCACACCTTCCACGACAGCTACAACTGACGGTCCGACAACAACCACACCTACAACGACAGCTACAACTgaagctcctacgaccactacaacgacaactgcagttcctacgacaactgcagctactacaacaactgcagcacctacgacaactgcagctcctgagACAACTAGttctgcagctcctacgacaactCTACAACTGACGGTCCGACAACAACCACACCTACAACGACAGCTACAACTgaactcctacgacaacctcaACTGCAACACCTtctacaactgcagctcctacaaccacTATGACTGCAGCaactactacgacaaccacaactctcctacgacaacctcaACTGCAACACCTtctacaactgcagctcctacaaccacTATGACTGCAGCaactactacgacaaccacaactgcacctactgctacaaccacaactgcagatcCTACTACAACTACAACAACTTTAGCTCCTACAACAGCTACAACTGCAGCAACTACTACAACTGAAGCCCCGACAACAACCACACCTTCCACGACAGCTACAACTGACGGTCCGACAACAACCACATCTACAACGACAGCTACAACTgaagctcctacgaccactacaacgacaactgcagttcctacgacaactgcagctactacaacaactgcagcacctacgacaactgcagctcctgcgacaactggagcacctactacgacaactgcagcacctactacgaccactgcagcgcctactacgacaactgtagctcccacaacaactatttctgcagctcctacgacaactgcagctcctgcgacaactgcagttcctacgacaactgcagctactacgacaactgcagcacctacgacaactgcagctactacgacaactgcagcacctactacgaccactgcagcgcctactacgacaactgtagctcccacaacaactagttctgcagctcctacgacaactgcagctcctgcgacaactgcagttcctacgacaactgcagctactaCGACAACTAaagcacctacgacaactgcagctcctgcgacaactggagcacctactacgacaactgcagcacctactacgaccactgcagcgcctactacgacaactgtagctcccacaacaactagttctgcagctcctacgacaactgcagcgcctactacgacaactgtagctcccacaacaactatttctgcagctcctacgacaactgcagctcctacgacaactgcagttcctacgacaactgcagctcctgcgacaactagttctgcagctcctacgacaactgcagctcctgcgacaactgcagttcctacgacaactgcagctactatgacaactgcagcacctacgacaactgcagctcctgcgacaactggagcacctactacgacaactgcagcacctactacgaccactgcagcgcctactacgacaactgtagctcccacaacaactagttctgcagctcctacgacaactacagctcctgcgacaactgcagttcctacaacaactgcagcacctactacgacaactgcagcacctacgacaactgcagcacctacgacaactcccacaacaactacttctgcagctcctacgacaacctcaACTGCAACACCTtctacaactgcagctcctacaaccacTATGACTGCActcctctcctacgacaacctcaACTGCAACACCTtctacaactgcagctcctacaacctCTATGACTGCAGCAACtaccacgacaaccacaactgcacctactgctacaaccacaactgcagatcCTACTACAACATTAGTTGTAGTTTCAActcctacgacaacctcaACTGCAACACCTtctacaactgcagctcctacaaccacTATGACTGCAGCAACTACTACGACAACAACAACTGCacctactgctacaaccacaactgcagatcCTACTACAACATTAGTTGTAGTTTCAActcctacgacaacctcaACTGCAACACATtctacaactgcagctcctacaaccacTATGACTGCAGCaactactacgacaaccacaactgcacctactgctacaaccacaACGGCGGATCCTACTACAACATTAGTTGTAGTTTCAAGCACTGCAGCAGCTGA

Function

NR:

description
mucin-5AC-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951061.1 True 2259 mRNA 0.51 12 43772326 43780922

Neighbor

gene id symbol gene type direction distance location
LOC118940988 NA coding downstream 2939 43765123 ~ 43769387 (-)
LOC110496830 NA coding downstream 9668 43761685 ~ 43762658 (-)
LOC118940987 NA coding downstream 104130 43624763 ~ 43668196 (-)
LOC118940986 NA coding downstream 149503 43614674 ~ 43622823 (-)
LOC118940985 NA coding downstream 161991 43608205 ~ 43610335 (-)
LOC118940990 NA coding upstream 351 43781273 ~ 43789565 (-)
LOC118940991 NA coding upstream 10353 43791275 ~ 43794053 (-)
LOC118940992 NA coding upstream 33027 43813949 ~ 43858805 (-)
LOC118940993 NA coding upstream 79441 43860363 ~ 43890563 (-)
LOC118941172 NA coding upstream 141194 43922116 ~ 43926474 (-)
G1551623 NA non-coding downstream 65834 43674640 ~ 43706492 (-)
G1551599 NA non-coding downstream 173409 43597439 ~ 43598917 (-)
G1551087 LOC106562846 non-coding downstream 625982 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 651385 43120322 ~ 43120941 (-)
G1551725 NA non-coding upstream 130111 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 205607 43986529 ~ 43986759 (-)
G1551893 NA non-coding upstream 205903 43986825 ~ 43987035 (-)
LOC110496339 mterf1 non-coding upstream 231685 44010012 ~ 44012891 (-)
G1551935 NA non-coding upstream 269443 44050365 ~ 44050741 (-)
LOC118936491 LOC106588302 other downstream 757207 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1412698 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1456247 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 2100812 41663436 ~ 41671516 (-)
G1552768 LOC106588550 other upstream 1039841 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1266758 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1284212 45065134 ~ 45073340 (-)
G1553544 NA other upstream 1886439 45667361 ~ 45667740 (-)
G1553693 LOC106588587 other upstream 2007177 45788099 ~ 45803048 (-)

Expression


Co-expression Network