LOC118940991


Basic Information

Item Value
gene id LOC118940991
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43791275 ~ 43794053 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951063.1
acaactgcagcacctacgacaactgcagctcctgcgacaactggagcacctactacgaccactgcagcgcctactacgacaactgtagctGCCACAACAACTACttctgcagctcctacgacaacctcaACTGCAACACCTtctacaactgcagctcctacaaccacTATGACTGCAGCaactactacgacaaccacaactgcacctactgctacaaccacaactgcagatcCTACTACAACATTAGTTGTAGTTTCAAGCACTGCAGCAGCTGAACCTGCAACAACTGTAggtcctactacaacaactgtagctcctacaacagctACAACTGCAGCAACTACTACAACTGAAGCTACGACAACAACCACACCTTCCACTACAGCTACAACTGACGGTCCGACAACAACCACACCTACTACGTCAGCTACAACTgaagctcctacgaccactacaacgacaactgcagctcctgcgacaaccggagcacctactacgacaactgcagcacctactacgaccactgcagcgcctactacgacaactgtagctcccacaacaactacttctgcagctcctacgacaactgcagctcctgcgacaactgcagttcctacgtcaactgcagttcctacgacaactgcagctactacgacaactgcagcacctactacgaccactGCAGCGCCTACTACGATAACTGTAGGTCCCACAACAACTActactacgacaactgcagctcctacgacaactggagcacctactacgacaactgcagcacctactacgagcactgcagcgcctactacgacaactgtagctcccacaacaactagttctgcagctcctacgacaactacagctcctgcgacaactgcagttcctacaacaactgcagcacctactacgacaactgcagcacctacgacaactgcagcacctacgacaactggagcacctattacgacaactgcagcacctactacgaccactgcagcgcctactacgacaactgtagctcccacaacaactactactacgacaactgcagcacctacgacaactgcagctcctgcgacaactggagcacctactacgacaactgcagcacctactacgaccactgcagcgtctactacaactgcagcacctacgacaactgcagctcctgcgacaactggagcacctactacgacaactgcagcgcctactacgacaactgtagctcccacaacaactagttctgcagctcctacgacaactacagctcctgcgacaactacagctcctgcgacaactgcagttcctacaacaactgcagcacctactacgacaactgcagcacctacgacaactgcagcacctactacgacaactgcagcacctactacgaccactgcagcgcctactacgacaactgtagctcccacaacaactacttctgcagctcctacgacaacctcaACTGCAACACCTtctacaactgcagctcctacaaccacTATGACTGCAGCaactactacgacaaccacaactgcacctactgctacaaccacaactACAACAACCACACCTTCCACGACAGCTACAACTGACGGTCCGACAACAACCACACCTACTACGACAGCTACAACTGAAGCTCCTACGACCATTACAACGACAACTGCactcctacaaccacTATGA

Function

NR:

description
mucin-5AC-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951063.1 True 1686 mRNA 0.52 6 43791275 43794053

Neighbor

gene id symbol gene type direction distance location
LOC118940990 NA coding downstream 1710 43781273 ~ 43789565 (-)
LOC118940989 NA coding downstream 10353 43772326 ~ 43780922 (-)
LOC118940988 NA coding downstream 21888 43765123 ~ 43769387 (-)
LOC110496830 NA coding downstream 28617 43761685 ~ 43762658 (-)
LOC118940987 NA coding downstream 123079 43624763 ~ 43668196 (-)
LOC118940992 NA coding upstream 19896 43813949 ~ 43858805 (-)
LOC118940993 NA coding upstream 66310 43860363 ~ 43890563 (-)
LOC118941172 NA coding upstream 128063 43922116 ~ 43926474 (-)
dus3l dus3l coding upstream 158265 43952318 ~ 43973541 (-)
LOC110496339 mterf1 coding upstream 215959 44010012 ~ 44012891 (-)
G1551623 NA non-coding downstream 84783 43674640 ~ 43706492 (-)
G1551599 NA non-coding downstream 192358 43597439 ~ 43598917 (-)
G1551087 LOC106562846 non-coding downstream 644931 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 670334 43120322 ~ 43120941 (-)
G1551725 NA non-coding upstream 116980 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 192476 43986529 ~ 43986759 (-)
G1551893 NA non-coding upstream 192772 43986825 ~ 43987035 (-)
G1551935 NA non-coding upstream 256312 44050365 ~ 44050741 (-)
LOC118936491 LOC106588302 other downstream 776156 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1431647 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1475196 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 2119761 41663436 ~ 41671516 (-)
G1552768 LOC106588550 other upstream 1026710 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1253627 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1271081 45065134 ~ 45073340 (-)
G1553544 NA other upstream 1873308 45667361 ~ 45667740 (-)
G1553693 LOC106588587 other upstream 1994046 45788099 ~ 45803048 (-)

Expression


Co-expression Network