LOC118940992


Basic Information

Item Value
gene id LOC118940992
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 43813949 ~ 43858805 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951064.1
acaaccacagcacctactacgacaactacaactgtagctcctacgaccaccacaactgcagctccaactacaAAAACTGTAGCTTCTATTACCACttcaactgcagcacctacttcaactacaacaactgtagctcttacgaccaccacaactgcagcacctactacgacaacgaCAACACCTACCACGACAACCACAGCAcatactacgacaaccacaactgtagctcctacgacaatcacaactgcagctccaactacaacaactgtagctcctacgaccaccacaactgcagctccaactacaAAAACTGTAGCTTCTAttaccactacaactgcagcacctacttcaactacaacaactgtagctcttacgaccaccacaactgcagcacctactacgacaacgaCAACACCTACCACGACAACCACAGCAcatactacgacaactactaccacaaccacaacacctactatgacaaccacaacacctactacgacaaccacaacacctactacgacaaccacaacacctaccacgacaaccacaacacctaccacgacaaccacaacacctaccacgacaaccacaacacctactacgacaaccacaacagcacctgctacaataactacaactgcagctcttacaacaaccacaacttacAAACGGGCCATGACTGGCCCAGCTGACCCGGGCCAACTgcgcaacgccatctcctcccaaggagcctccATTGTTAGGCACGGGGAATTGCTTCATGGTCTTATGGAGGGGGTCCAAACGTTGAATGAGCGCCATGACCGGACTTTGGACGTGCTGCTGGAGCAATTACACTGGAATTCTGGGGGGCAGCCTGCCATGGTGGTAACCACACCGCCGCTCAGTAACTCAGCGGTTAGCAGCGCCGCCCACCGACCACTCCACCTTCCCGGGAGCCCCGTTTACCTCCCCAGAACGCTTTAA

Function

NR:

description
PREDICTED: protein LDOC1L-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951064.1 True 966 mRNA 0.51 3 43813949 43858805

Neighbor

gene id symbol gene type direction distance location
LOC118940991 NA coding downstream 19896 43791275 ~ 43794053 (-)
LOC118940990 NA coding downstream 24384 43781273 ~ 43789565 (-)
LOC118940989 NA coding downstream 33027 43772326 ~ 43780922 (-)
LOC118940988 NA coding downstream 44562 43765123 ~ 43769387 (-)
LOC110496830 NA coding downstream 51291 43761685 ~ 43762658 (-)
LOC118940993 NA coding upstream 1558 43860363 ~ 43890563 (-)
LOC118941172 NA coding upstream 63311 43922116 ~ 43926474 (-)
dus3l dus3l coding upstream 93513 43952318 ~ 43973541 (-)
LOC110496339 mterf1 coding upstream 151207 44010012 ~ 44012891 (-)
LOC110496341 LOC106588568 coding upstream 300038 44158843 ~ 44165139 (-)
G1551623 NA non-coding downstream 107457 43674640 ~ 43706492 (-)
LOC118940987 NA non-coding downstream 183066 43624763 ~ 43668196 (-)
G1551599 NA non-coding downstream 215032 43597439 ~ 43598917 (-)
G1551087 LOC106562846 non-coding downstream 667605 43145762 ~ 43146344 (-)
G1551071 NA non-coding downstream 693008 43120322 ~ 43120941 (-)
G1551725 NA non-coding upstream 52228 43911033 ~ 43911239 (-)
G1551892 NA non-coding upstream 127724 43986529 ~ 43986759 (-)
G1551893 NA non-coding upstream 128020 43986825 ~ 43987035 (-)
G1551935 NA non-coding upstream 191560 44050365 ~ 44050741 (-)
LOC118936491 LOC106588302 other downstream 798830 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1454321 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1497870 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 2142435 41663436 ~ 41671516 (-)
G1552768 LOC106588550 other upstream 961958 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 1188875 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 1206329 45065134 ~ 45073340 (-)
G1553544 NA other upstream 1808556 45667361 ~ 45667740 (-)
G1553693 LOC106588587 other upstream 1929294 45788099 ~ 45803048 (-)

Expression


Co-expression Network