trnal-uaa-42



Basic Information


Item Value
gene id trnal-uaa-42
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 44271338 ~ 44271420 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnal-uaa-42
ACCAGGATGGCCgagaggttaaggcgttggacttaaGATCCAATGGACATATGTCCTCGTGGGTTAGAACCCCACTCCTGGTA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnal-uaa-42 True 83 mRNA 0.52 1 44271338 44271420

Neighbor


gene id symbol gene type direction distance location
trnal-uaa-41 NA coding downstream 738 44270518 ~ 44270600 (-)
trnal-uaa-40 NA coding downstream 1558 44269698 ~ 44269780 (-)
trnal-uaa-39 NA coding downstream 2369 44268887 ~ 44268969 (-)
trnal-uaa-38 NA coding downstream 3190 44268066 ~ 44268148 (-)
trnal-uaa-37 NA coding downstream 4648 44266608 ~ 44266690 (-)
trnal-uaa-43 NA coding upstream 738 44272158 ~ 44272240 (-)
trnal-uaa-44 NA coding upstream 1558 44272978 ~ 44273060 (-)
trnal-uaa-45 NA coding upstream 2378 44273798 ~ 44273880 (-)
trnal-uaa-46 NA coding upstream 3147 44274567 ~ 44274649 (-)
trnal-uaa-47 NA coding upstream 3968 44275388 ~ 44275470 (-)
trnal-uaa-28 NA non-coding downstream 7287 44258600 ~ 44264051 (-)
G1552255 NA non-coding downstream 37569 44233524 ~ 44233769 (-)
G1552243 NA non-coding downstream 38349 44229930 ~ 44232989 (-)
G1552245 NA non-coding downstream 59915 44211086 ~ 44211423 (-)
G1552244 NA non-coding downstream 60856 44210247 ~ 44210482 (-)
trnal-uaa-48 NA non-coding upstream 4185 44275605 ~ 44276650 (-)
G1552331 NA non-coding upstream 112818 44384238 ~ 44384491 (-)
G1552348 NA non-coding upstream 139268 44410688 ~ 44411062 (-)
G1552353 NA non-coding upstream 149263 44420683 ~ 44420951 (-)
G1552358 NA non-coding upstream 156538 44427958 ~ 44428171 (-)
LOC118940987 NA other downstream 638461 43624763 ~ 43668196 (-)
LOC118936491 LOC106588302 other downstream 1256219 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1911710 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1955259 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 2599824 41663436 ~ 41671516 (-)
G1552768 LOC106588550 other upstream 549343 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 776260 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 793714 45065134 ~ 45073340 (-)
G1553544 NA other upstream 1395941 45667361 ~ 45667740 (-)
G1553693 LOC106588587 other upstream 1516679 45788099 ~ 45803048 (-)

Expression



Co-expression Network