trnal-uaa-57


Basic Information

Item Value
gene id trnal-uaa-57
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 44283492 ~ 44283574 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnal-uaa-57
ACCAGGATGGCCgagaggttaaggcgttggacttaaGATCCAATGGACATATGTCCTCGTGGGTTCGAACCCCACTCCTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-uaa-57 True 83 mRNA 0.53 1 44283492 44283574

Neighbor

gene id symbol gene type direction distance location
trnal-uaa-56 NA coding downstream 682 44282728 ~ 44282810 (-)
trnal-uaa-55 NA coding downstream 1502 44281908 ~ 44281990 (-)
trnal-uaa-54 NA coding downstream 2312 44281098 ~ 44281180 (-)
trnal-uaa-53 NA coding downstream 3132 44280278 ~ 44280360 (-)
trnal-uaa-52 NA coding downstream 3942 44279468 ~ 44279550 (-)
trnal-uaa-58 NA coding upstream 687 44284261 ~ 44284343 (-)
LOC110496346 NA coding upstream 14755 44298329 ~ 44304476 (-)
LOC118936320 LOC106588563 coding upstream 69636 44353210 ~ 44363948 (-)
LOC110496350 rpc7l coding upstream 193622 44477196 ~ 44486727 (-)
LOC110496351 LOC106588560 coding upstream 203695 44487269 ~ 44537143 (-)
trnal-uaa-48 NA non-coding downstream 6842 44275605 ~ 44276650 (-)
trnal-uaa-28 NA non-coding downstream 19441 44258600 ~ 44264051 (-)
G1552255 NA non-coding downstream 49723 44233524 ~ 44233769 (-)
G1552243 NA non-coding downstream 50503 44229930 ~ 44232989 (-)
G1552245 NA non-coding downstream 72069 44211086 ~ 44211423 (-)
G1552331 NA non-coding upstream 100664 44384238 ~ 44384491 (-)
G1552348 NA non-coding upstream 127114 44410688 ~ 44411062 (-)
G1552353 NA non-coding upstream 137109 44420683 ~ 44420951 (-)
G1552358 NA non-coding upstream 144384 44427958 ~ 44428171 (-)
G1552360 NA non-coding upstream 150906 44434480 ~ 44434739 (-)
LOC118940987 NA other downstream 650615 43624763 ~ 43668196 (-)
LOC118936491 LOC106588302 other downstream 1268373 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1923864 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1967413 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 2611978 41663436 ~ 41671516 (-)
G1552768 LOC106588550 other upstream 537189 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 764106 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 781560 45065134 ~ 45073340 (-)
G1553544 NA other upstream 1383787 45667361 ~ 45667740 (-)
G1553693 LOC106588587 other upstream 1504525 45788099 ~ 45803048 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) trnaf-gaa_6 NA coding NC_053117.1 CM020914.1 38431592 ~ 38431664 (+)
tiger barb (Puntius tetrazona) trnal-uaa_13 NA coding NC_056700.1 CM032069.1 25049604 ~ 25049686 (+)