trnal-uaa-58



Basic Information


Item Value
gene id trnal-uaa-58
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 44284261 ~ 44284343 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnal-uaa-58
ACCAGGATGGCCgagaggttaaggcgttggacttaaGATCCACTGGACATATGTCCTCGTGGGTTCGAACCCCACTCCTGGTA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnal-uaa-58 True 83 mRNA 0.54 1 44284261 44284343

Neighbor


gene id symbol gene type direction distance location
trnal-uaa-57 NA coding downstream 687 44283492 ~ 44283574 (-)
trnal-uaa-56 NA coding downstream 1451 44282728 ~ 44282810 (-)
trnal-uaa-55 NA coding downstream 2271 44281908 ~ 44281990 (-)
trnal-uaa-54 NA coding downstream 3081 44281098 ~ 44281180 (-)
trnal-uaa-53 NA coding downstream 3901 44280278 ~ 44280360 (-)
LOC110496346 NA coding upstream 13986 44298329 ~ 44304476 (-)
LOC118936320 LOC106588563 coding upstream 68867 44353210 ~ 44363948 (-)
LOC110496350 rpc7l coding upstream 192853 44477196 ~ 44486727 (-)
LOC110496351 LOC106588560 coding upstream 202926 44487269 ~ 44537143 (-)
LOC110496833 LOC106588558 coding upstream 346423 44630766 ~ 44654925 (-)
trnal-uaa-48 NA non-coding downstream 7611 44275605 ~ 44276650 (-)
trnal-uaa-28 NA non-coding downstream 20210 44258600 ~ 44264051 (-)
G1552255 NA non-coding downstream 50492 44233524 ~ 44233769 (-)
G1552243 NA non-coding downstream 51272 44229930 ~ 44232989 (-)
G1552245 NA non-coding downstream 72838 44211086 ~ 44211423 (-)
G1552331 NA non-coding upstream 99895 44384238 ~ 44384491 (-)
G1552348 NA non-coding upstream 126345 44410688 ~ 44411062 (-)
G1552353 NA non-coding upstream 136340 44420683 ~ 44420951 (-)
G1552358 NA non-coding upstream 143615 44427958 ~ 44428171 (-)
G1552360 NA non-coding upstream 150137 44434480 ~ 44434739 (-)
LOC118940987 NA other downstream 651384 43624763 ~ 43668196 (-)
LOC118936491 LOC106588302 other downstream 1269142 42895031 ~ 43015119 (-)
G1550202 NA other downstream 1924633 42359148 ~ 42359628 (-)
G1550177 LOC106569881 other downstream 1968182 42315286 ~ 42316079 (-)
LOC110496277 LOC106588347 other downstream 2612747 41663436 ~ 41671516 (-)
G1552768 LOC106588550 other upstream 536420 44820763 ~ 44828808 (-)
G1552866 LOC106588536 other upstream 763337 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other upstream 780791 45065134 ~ 45073340 (-)
G1553544 NA other upstream 1383018 45667361 ~ 45667740 (-)
G1553693 LOC106588587 other upstream 1503756 45788099 ~ 45803048 (-)

Expression



Co-expression Network