LOC110496374 (LOC106570224)


Basic Information

Item Value
gene id LOC110496374
gene name LOC106570224
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 45856733 ~ 45890268 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952935.1
TTCCATAGAGCCCAACCCTGCTCCTGGATGGGTGAGGTCCCTGCCAACCCAGTCGGTCAGTGAACCCCCCCACTCCCCACCCATCGCCTCCCGACCAGGACCCCCTGGGTCACCCAGAGGAGCAGCAGGGATGTACCAGGAGGTGGCCTTCCTAGCGGGCAGCACGGAGAAAGAGTTCACTCCCTTCCACTTCCCCATTGAGAACCAGCAGGAGGTGGTAACTAAGAAGGGTGTGTTCTTCAAGCGGCAACGGCTGCTGCGGAGGCCCAATGAGGGGCAGGAGGAAAATGACCTATCAGCCGTCATTAACGTGGGCGGTATCAGGTACCGTATCCCCTGGTCCGTTCTGGAGGAGTTCCCTCTGACGCGGCTGGGCCGGCTGAGGGGCTGTAGCTCATTGGACGAGATCATGGAGGTGTGTGATGACTACGATGACGGGTGCCAGGAGTACTTCTTTGACCGCAGCCCATCTGCGTTCCGCACTATCGTGACGTTCCTAGCGGCAGGGCGGCTGCGGCTGCTGAGGGAGATGTGTGCCCTGTCCTTCCAGGAGGAGCTGGTCTACTGGGGCGTGGAGGACACCAGGCTGGAGTGGTGCTGCCTCCGAAAGCTACGCATCAGGCAGGAGGAGCTCAAGGAGCAGCTGAGGATGGAGGAGGCAGAGCTCACCTCAACCCTGACCCCCCAGAGCTGTGAGGATGGGCAGGGGCACgccggggagggagggggggaggaggagagccgCATGGCGGGGTGTATGCGCAGGCTGCACGACATGGTGGAGAACCCTCAATCTGGACTACCTGGAAAGATCTTTGCCTTCTTGTCGGTGGTGTTTGTGGCCATCACCGCAGTAACGCTCTGCATCAGTACCATGCCCGACCtccgggaggaggaggagaggGGTGAGTGTTCTCAGAGGTGCTACAATATCTTTGTCctggagactgtgtgtgtggccTGGTTCTCTCTGGAGTTCCTGCTGCGCTTCATCCAGACGCCGAGTAAGTGTGTGTTCCTGAAGACGCCCCTCAACATCATCGACGTGGTGGCCATCCTGCCCTATTACATCACTGTGATCGTAGACTCTCTGTCTGAGGGAGGGGAGAAGCCCAGCGGCGGGAACAACTACCTGGAGAAGGTGGGCCTGGTGTTGCGGGTACTCCGGGCCTTGAGGATCTTCTACGTGATGCGTCTGGCGCGCCACTCCCTGGGGCTGCAGACCTTAGGCCTGACGGTCCGACGCTGCACCCGCGAGTTCGGCCTGCTCCTCCTGTTCCTGTGTGTTGCCATGGCACTGTTCTCCCCGCTGGTGTTCCTGGCGGAGAGCGAGATGGGCGCCAAGTACGACTTCACCAGCATCCCCGGCACCTACTGGTGGGCGGTGATCTCCATGACAACGGTGGGGTACGGGGACATGGTGCCGCGTAGCATCCCGGGTCAGGTGGTGGCGCTCAGCAGCATCCTCAGTGGGATCCTCCTCATGGCGTTCCCCGTCACCTCCATCTTCCACACGTTCTCTCGGTCCTACCTGGAGCTGAAGgaggagcagaacagaacacTGAGACAGAAACCAGACTTCCAGGACTCCAGCAAGTCTCAGAACAGCGAGGACTCGGCCGAAACGGACAGTTAACATGGCATCACTGAAGTCGCCTCCTCTGCTTTACGCAGGAAGTCCATCGCCCTTGCGTCACAGAGGAGGGCCATGCAGACTCAAGACTGAGTGTGTGTGCAACGTGAAAGCCTGTGGGTGTGCAGTGCACTGTGGGAAACTCGTACTAAAGCTGGAGGATCTAAACAGGGATTTCAAGCTTAAAAAGAAAAGGAGCTCCAACATTTTGTGACCCTCCATAGCTCTGTCCATCAGAGTGTGTTCAAGAGTTTCTAAGATTTTATAAGACAGCTGCATAAGTCTTTTTGCTGACATTACTGGTGTATAGCTGATCACATTATAAAATCACAAGTTCTCTGTGGTCAAAGGACATTTCACCCAGGAGTATAGAAGCCCTACAACACAGGAGTATAGCCCTACAGCACAGCATGGGGAGAAACCTTCTCTCTCACAAATATTCAGTATGATTAAAGCTATTATTTTAAGGGAAAAAACACTACAAATATTATAATTTTGGTATATATTTAGGATAAGAAATATTGCAACAAGATATAAGTGCAATAAGAAAGATTATTTAACTATAAACAACACATTTACATATTTCAGAATGCTTAGTTTGCGTCTATATAGACTCAGGATCTGCATATTTTAATAAATGTAAGAAAACCATGACCTCGGCTGATGCAATGTATGATTCTACACTTTATTAAATTAATTTGATCCCATGATTCTGTCTGGGGGTTTTCCTCCAATTTCCTCTGAATAATAATGGCCTTGGCTCCAGACATGTTATGTTCAATCTaatcaggggcgcaactttggttttagaagtgggggggacataat
>XM_021572235.2
TTGGCTGTTGGAAGCAGAAGTCAATTCCGGGAAGAAGCGAAGCAGAGCAGGGAGCACAGCGCGGAGCGCGATTTTGTCGCGTGAGCAGAGCGGTGTCCGACTCCAAGACAGTCAGAGGAGAGACGTAACATTGGAATTATCACAGAGCAGCAACCCCCATTCATTCACGCTGGGCTCTTCTCAAATCCGCGGCGTCTTTTCCAACTGCTCTATCGTGAGTCTCGTCCGGTTGAGTGGGTTATTTTGTTAATGTCAGTTCCTTCGATTTAAAACAATCATAGTATTGTTCAGTATTTTGATTATTCTATGCGGGTGTGCAGCAAGTTTACCAAACCTTCAAACTTGCTCCTAATGGTTCAGAAGTAAAGCACGTGACGTTACCTGGGACTGAGTGCACCTGTCCTGGTATAAAGTCAAGTAACCATGTTAGGACCATTTATACAGAGGACGGAGTAGACTGGATCATGTATTTTATGTTGACCAATATGCGCTTTCATAACTGATATCGAAATGTGGGGAAGTTCTCTGCCAATGGACACAAGCCGAACACAGCGGAGCCCAACCCTGCTCCTGGATGGGTGAGGTCCCTGCCAACCCAGTCGGTCAGTGAACCCCCCCACTCCCCACCCATCGCCTCCCGACCAGGACCCCCTGGGTCACCCAGAGGAGCAGCAGGGATGTACCAGGAGGTGGCCTTCCTAGCGGGCAGCACGGAGAAAGAGTTCACTCCCTTCCACTTCCCCATTGAGAACCAGCAGGAGGTGGTAACTAAGAAGGGTGTGTTCTTCAAGCGGCAACGGCTGCTGCGGAGGCCCAATGAGGGGCAGGAGGAAAATGACCTATCAGCCGTCATTAACGTGGGCGGTATCAGGTACCGTATCCCCTGGTCCGTTCTGGAGGAGTTCCCTCTGACGCGGCTGGGCCGGCTGAGGGGCTGTAGCTCATTGGACGAGATCATGGAGGTGTGTGATGACTACGATGACGGGTGCCAGGAGTACTTCTTTGACCGCAGCCCATCTGCGTTCCGCACTATCGTGACGTTCCTAGCGGCAGGGCGGCTGCGGCTGCTGAGGGAGATGTGTGCCCTGTCCTTCCAGGAGGAGCTGGTCTACTGGGGCGTGGAGGACACCAGGCTGGAGTGGTGCTGCCTCCGAAAGCTACGCATCAGGCAGGAGGAGCTCAAGGAGCAGCTGAGGATGGAGGAGGCAGAGCTCACCTCAACCCTGACCCCCCAGAGCTGTGAGGATGGGCAGGGGCACgccggggagggagggggggaggaggagagccgCATGGCGGGGTGTATGCGCAGGCTGCACGACATGGTGGAGAACCCTCAATCTGGACTACCTGGAAAGATCTTTGCCTTCTTGTCGGTGGTGTTTGTGGCCATCACCGCAGTAACGCTCTGCATCAGTACCATGCCCGACCtccgggaggaggaggagaggGGTGAGTGTTCTCAGAGGTGCTACAATATCTTTGTCctggagactgtgtgtgtggccTGGTTCTCTCTGGAGTTCCTGCTGCGCTTCATCCAGACGCCGAGTAAGTGTGTGTTCCTGAAGACGCCCCTCAACATCATCGACGTGGTGGCCATCCTGCCCTATTACATCACTGTGATCGTAGACTCTCTGTCTGAGGGAGGGGAGAAGCCCAGCGGCGGGAACAACTACCTGGAGAAGGTGGGCCTGGTGTTGCGGGTACTCCGGGCCTTGAGGATCTTCTACGTGATGCGTCTGGCGCGCCACTCCCTGGGGCTGCAGACCTTAGGCCTGACGGTCCGACGCTGCACCCGCGAGTTCGGCCTGCTCCTCCTGTTCCTGTGTGTTGCCATGGCACTGTTCTCCCCGCTGGTGTTCCTGGCGGAGAGCGAGATGGGCGCCAAGTACGACTTCACCAGCATCCCCGGCACCTACTGGTGGGCGGTGATCTCCATGACAACGGTGGGGTACGGGGACATGGTGCCGCGTAGCATCCCGGGTCAGGTGGTGGCGCTCAGCAGCATCCTCAGTGGGATCCTCCTCATGGCGTTCCCCGTCACCTCCATCTTCCACACGTTCTCTCGGTCCTACCTGGAGCTGAAGgaggagcagaacagaacacTGAGACAGAAACCAGACTTCCAGGACTCCAGCAAGTCTCAGAACAGCGAGGACTCGGCCGAAACGGACAGTTAACATGGCATCACTGAAGTCGCCTCCTCTGCTTTACGCAGGAAGTCCATCGCCCTTGCGTCACAGAGGAGGGCCATGCAGACTCAAGACTGAGTGTGTGTGCAACGTGAAAGCCTGTGGGTGTGCAGTGCACTGTGGGAAACTCGTACTAAAGCTGGAGGATCTAAACAGGGATTTCAAGCTTAAAAAGAAAAGGAGCTCCAACATTTTGTGACCCTCCATAGCTCTGTCCATCAGAGTGTGTTCAAGAGTTTCTAAGATTTTATAAGACAGCTGCATAAGTCTTTTTGCTGACATTACTGGTGTATAGCTGATCACATTATAAAATCACAAGTTCTCTGTGGTCAAAGGACATTTCACCCAGGAGTATAGAAGCCCTACAACACAGGAGTATAGCCCTACAGCACAGCATGGGGAGAAACCTTCTCTCTCACAAATATTCAGTATGATTAAAGCTATTATTTTAAGGGAAAAAACACTACAAATATTATAATTTTGGTATATATTTAGGATAAGAAATATTGCAACAAGATATAAGTGCAATAAGAAAGATTATTTAACTATAAACAACACATTTACATATTTCAGAATGCTTAGTTTGCGTCTATATAGACTCAGGATCTGCATATTTTAATAAATGTAAGAAAACCATGACCTCGGCTGATGCAATGTATGATTCTACACTTTATTAAATTAATTTGATCCCATGATTCTGTCTGGGGGTTTTCCTCCAATTTCCTCTGAATAATAATGGCCTTGGCTCCAGACATGTTATGTTCAATCTaatcaggggcgcaactttggttttagaagtgggggggacataa

Function

NR:

description
potassium voltage-gated channel subfamily G member 2-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0051260 protein homooligomerization biological_process
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG:

id description
K04900 KCNG1, KV6.1; potassium voltage-gated channel subfamily G member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952935.1 False 2461 mRNA 0.54 3 45856733 45876685
XM_021572235.2 True 3007 mRNA 0.52 4 45856734 45890268

Neighbor

gene id symbol gene type direction distance location
LOC110496365 LOC106588581 coding downstream 294566 45475935 ~ 45562167 (-)
LOC100499581 LOC106588577 coding downstream 483760 45369569 ~ 45372973 (-)
LOC110496360 LOC106588576 coding downstream 509177 45342003 ~ 45347556 (-)
LOC110496937 LOC106588536 coding downstream 913635 44938130 ~ 44943098 (-)
LOC110496357 NA coding downstream 999999 44818544 ~ 44856861 (-)
LOC110496375 LOC106588593 coding upstream 21588 45911856 ~ 46028798 (-)
LOC110496377 LOC106588592 coding upstream 149383 46039651 ~ 46056951 (-)
LOC110496378 LOC106588595 coding upstream 170776 46061044 ~ 46074477 (-)
LOC110496379 LOC106588596 coding upstream 190229 46080497 ~ 46142731 (-)
LOC110496382 LOC106588622 coding upstream 687190 46577458 ~ 46640870 (-)
G1553990 NA non-coding downstream 4993 45851427 ~ 45851740 (-)
G1553988 NA non-coding downstream 6403 45849984 ~ 45850330 (-)
G1553721 NA non-coding downstream 22782 45833711 ~ 45833951 (-)
G1553701 NA non-coding downstream 54119 45800951 ~ 45802614 (-)
G1553532 NA non-coding downstream 196759 45659662 ~ 45659974 (-)
G1554026 NA non-coding upstream 13065 45903333 ~ 45903538 (-)
G1554041 NA non-coding upstream 31175 45921443 ~ 45921754 (-)
G1554172 NA non-coding upstream 327752 46218020 ~ 46218324 (-)
G1554213 NA non-coding upstream 333664 46223932 ~ 46286906 (-)
G1554248 NA non-coding upstream 396699 46286967 ~ 46288146 (-)
G1553693 LOC106588587 other downstream 53685 45788099 ~ 45803048 (-)
G1553544 NA other downstream 188993 45667361 ~ 45667740 (-)
G1552866 LOC106588536 other downstream 768947 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other downstream 783393 45065134 ~ 45073340 (-)
G1552768 LOC106588550 other downstream 1027925 44820763 ~ 44828808 (-)
G1554091 NA other upstream 210980 46101248 ~ 46108102 (-)
G1555168 NA other upstream 1021709 46911977 ~ 46912915 (-)
G1555543 NA other upstream 1653292 47543208 ~ 47546614 (-)
LOC110496837 LOC106588626 other upstream 2014571 47890580 ~ 47945574 (-)
LOC110496401 LOC106588640 other upstream 2092615 47982726 ~ 47986560 (-)

Expression


Co-expression Network