LOC110496378 (LOC106588595)


Basic Information

Item Value
gene id LOC110496378
gene name LOC106588595
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 46061044 ~ 46074477 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952941.1
atctctcccttctgctgCTGCTTAATGCTGCTGAACACACAAAGCCACGCCCCCTGTTGTTCAAGGAGAGAGTAGTTGCTTGACCACAGTCACAAGCACACCTCATTCAGGGGAgttgagcccccccccccttttggaTAAAAACTTCCAGAAGCTTTGCTCAAAGATCTCTAAGAAGACTCTGGATGGAGCGCAGATCGCTCTGGAACAGATCGATCAAACTGACTCCATCCTAATGGAGAACGTGCACCCCAGCATCACAGCAGACATGCTTACTCTGTACCTGGAGAGCCAACGGGGCGGGCGCCTTGAAGTTAAGGAGGTCACCATGATGTCAGAGGGGGTTGCCAGGGTCTCCTTCCTGGACTTTGACTCAGTGGAACGTGTCCTTAAACAATCACATAAACTGGAGGAGACAGATATGATGGTCAGGCCTTACTTCTCCTTCCTCCAATCAGAGGACAGCTCCTCCTCACCCCTGACCTCTCCCCTGACCTCTGTGAATGGAACATCACATGGTAGCACAACGAacacacagcagacagacagtggtggTCAATCACAGACTGATTCTCTCCCTGCAGACAGTACCAGTGACCGTTCTCAGTCCTCACACAAGGCTACCTCTGAGCCTCTGGtcccccctctgtccccccctGTGTCACAGGCAGCAGCAGCCCAGGGAGGCATGGGTGACCTAATTTCGACCCCAGAGCCCATGTCTAGCCACATTTCCGTCCCAGACCCGGTGAAACTCACCCTGCTCCAGGCCAGTCCCCTGCCCCAGAGCCTTCAGCTGGCCCACCAAGGCTGTAGCGTCCAGATCAGGGAGGACGGGGTCCATATGGCCGGGCCTGACCGGCCAACGCTGGAGCAGTTGAAGAACGCTGTGTTGGAGTTCCTTGGGGGCGTGGCCCAGGCTCATCTCACCTTTGACCCAGAAAAGGCCCACTTCCTGGCCAAACAGGAAGTGATGGACAGGCTGCTACAAACGTTGAAAGAAAACGGGCTGCCGTCCATGTACACTGTGTCGGACTGTGTCGTCATGGTAACGTCTCTGTCTCCCAGCTTGGTGAGCCAGGCATGTAGCATGTTGAAGACTCTGCTGTCTGACTTCAGTATCCCTGTGGACAGAGCGTACGAGTGTATGCTGTACGCCCAGGAGTGGACTGGCTTCCTCCAGTCTCTGACTCTTTGCTCAGCTAAGGTGTCCGAAAGAGGACAGATAGATGTCCTGACtctgagagggttggaggaggagaaGCAGGCTAAGATAGTGGAGTTCCTCAGTACACCCATTGAAACGGAGGCTATCATCTCTATGGAGTCAGGAATGTTGAAGTACATCCAGACCCACCATCATCAGCTACTGGCTGATATGAACCAGGTGTCTATCTTCCCTCTAGACGCACATGGCGTCTGTGGACTCAGAATCCAAGGCAATGCTGCGGCATGTCAAATGGCCGATGAGGTTCTGAGGGGCGTGGTGTTGTCCACCGAGACCAGAACCATCACGGTGAAACAGACGGGCGTGGCGCGGTTCCTCATCCAGGAGGGGGAGGGGACCAGCATCCTCAGGGAGATGCAGACTAAGTTCCAGGTCTACATAAACATGGAGAAGGTGCACTGGGAACCCCTGGACAACGAGGACATCTTTGAGGCTGCATGGAATATGATGTCCCATCAGAGCTTCCAGAGAAGTTCCTTACAGGCCTCAACATCAGTTCTGACTCGCACTATCCAGACTTCCAACAGCCTCTCAGCTTTAGACAGAGGTCGTATAGAGGAGGCAAAGAGGCTGTTCTCAGCCATAGATGAGACGGTGGACTCTGGCCTCTCCGGTTTGACCGGAACCACTGACATGGAGGAGGATCTGTTTCCGGCCGAGAAACCCATGGCCCCGAgctctgaccagggcccagacaGGGACAGCGCTAACgttgaggtggaggaagaggctcCACTGCCCCTGGTGGAGGGAGGGGATAGTGACGATGTGGGTGCTACTGCTCCTGTGGTGACTCAGGATGGAGAGATGTCCCGGGCCATGCAACTCTCCACTACCCTGGAGGAGGAGGCGCAGATGTCCCTGGCCATCCAGTACTCTATGGAGACCACCAAGAGGTCCCTggctgatgaggaggaggagctgcAGAAGGTTCTAGAGCTGTCCAGGAAGATAACGAAGATGACTCGGGATGATGGCGGTGCCATGCCTACCGCTTCCCTCCCTACTGCTGGCTCCCACCTCGATCAGGCTGTCCAGGTATCTCTGCAGGAGGCCATTCAGTCAGCCAACTCGGCAACAATCTTTGTGTTCGCAGGCTACAGTTGTGACCTGGTCAGAGTGGACATTGCCCTGAACAAGAGGGTCAGTAATAAACAGCATAAGGAGAAGCTAGTGCACCGCAGCTTGAGGAGCCTGTCTCCGTATCacagGTGGTGTCTGGACCTCATCAAGAGGAAACACGCCGTGGAGGTCACCATCCAGGGAACTACGGCAATCATCTCCGGGTTCAAGGACTTTGTTACCGGTGCGATGCCGGACATGAAGCTGCTGCTAAGGAGGATCTCCACGACGACGTCAGACGCTGACATCCTGCGGACAGTGCAATGGGTGTGGCACGACCCGGCGTCGTCAGGGACGGAGACCCCGTACGCTCCGGAGGCGACAGTGTTCATGGAGAACGCCTGGAAGATGAGGCAGGAAAAGATCGACATCCTGCTCAACAACCTGCCGCACATCATCAACTTTGAGAAGATGCAGGAATACAACTTGGCCTCTGGGAAGTCCCTCACCATCTCCAGGAAGATGCTGAGCTCCGATGACGTGATCTCGGAGATGCAAGATGAGGACTACAGTCTACTGTCCAACCTGCCTGAAACGTCCAGAATGAACAAGGATTCTGATGAGTTCCGGGATGTTGTGAAAGACTTCTACGACTCCATACAGGAGTTCCACAACGAAATCCGAATCATTAAGGTTGAGAAGCTGATGAATAGGCTCCTGTACAACCAGTACAGACTGAAGAAGGCTAGTATAAATCAGAGTACCACTGACCCAGAAGTGGAGCGGACTCTGTACCACGGCACAAGCGAGACCAGCGTGAAAGAGATCTGTGTTCATGGCTTCAATAGAAGCTTCTGTGGAAAGAATGCCACTGTGTACGGTCAGGGGGTCTACTTTGCTGTGAACTCGGCCCTGTCCGTCCAGGATCAATATTCTCCCCCCAACGCAGACGGACACAAGTTTGTGTTTGTGACCAAGGTGCTGACTGGGGACTTCACTCAGGGCAGTCACTCCATGAAGACGGCTCCTCTGAAGGAGAGCTCTGACATACCCCTCCGATACGACAGCGTGGCAGATAAGACGGACAACCCCTCTCTGTTTGTGATCTTCAACGACACACAGGCTTACCCTGAGTATCTCATCACATGTCAGAAGATTCACCGCTGAGGGAGTGGGAGTTGATTGATATCCAAAGAACTGTTTGGTCAGTGTTTTATTTGTTGGTTTTCTCCGTGTTGAGAAAAGAGGATTCAAATAAAAtagtatttgtcacgtg
>XM_021572245.2
AGAAGAAGAAGTTGTTAGATGTTCAGGTCCCGCTGGGCCGCAGGGAAGTGAAGTCCTTGATCAGGGCAAAATGACTTAATCTTTGGCAAATGGAGTGGGATATTAGTAGTAAGGGGAGGCAATTTTATTGTGTGCTCTGGTCATTAAAGGAATAGGTGGGGTGTATGGGATGTAGAAGAGGAAGTTGGGTGGAGTAGACTACGGGTTGGGAACACAGGTTTGAATGCCACGTTGTGGATGGTAGGGAGACATGAAACAGGTCGGTGGAGTGTTTAGTGGAGGAAATGGTGTAGCATGTGTTGATATTTTGTGAACTGTATGATGTAGATCGGGAGATATTGTGTGAAAGTGTTGGAGAGCCTGTTTGTGGGAGGGAAGTGGTGTCAAGTCTCTTTCACCTTCTTCGAGGAACGGGAAAAATGAAGAGAATTTAATGTATGTAGGCTGTGTCTGGCTTCGCgatccagtacagtaggtggcagtgTATGCACCTTAAATTGTATGCGACCcgccaacccaatcccaaagaagaagaagaaatcgCCAATGAAGCCATTTCTGTGCGTCGTGGTCTGAGAATGCTTGTATTCCAGGATGTCTGCTGCAAGCCAAGAGAACCGGACAGTGGAGGTGCTGGGAGTaccagaggaggtggaggaggagctgTTGTATTTGTACTTTGAGAACAAGCGTCGTTCTGGGGGAGGTAATCTGGTGTCTGTGAAGCTGGAAGGGAGCCGCGCCTTACTGCTGTTTGAAGAGGCAGAGGTTGCATCAAGGGTCCTGTCTAAAAGAGCACATGTCCTGAGCAATGCTGAGCTGACCGTGAGGAAGCCTGCGTGTAAGGATCCACGGAGGCTGCTGCTGCGGGGGGTTAACCCATCCAGCTGTCAGGAGCTGGTGGAGCTGTATGTAGAGAACATGATGGGGATGGACATGCACGACTACACTCTGTACCCCTCACCTGGCAGGGACCTGGTCCTAGTACACTTCCATCAGGCCTTCAATAAAGACTTCCAGAAGCTTTGCTCAAAGATCTCTAAGAAGACTCTGGATGGAGCGCAGATCGCTCTGGAACAGATCGATCAAACTGACTCCATCCTAATGGAGAACGTGCACCCCAGCATCACAGCAGACATGCTTACTCTGTACCTGGAGAGCCAACGGGGCGGGCGCCTTGAAGTTAAGGAGGTCACCATGATGTCAGAGGGGGTTGCCAGGGTCTCCTTCCTGGACTTTGACTCAGTGGAACGTGTCCTTAAACAATCACATAAACTGGAGGAGACAGATATGATGGTCAGGCCTTACTTCTCCTTCCTCCAATCAGAGGACAGCTCCTCCTCACCCCTGACCTCTCCCCTGACCTCTGTGAATGGAACATCACATGGTAGCACAACGAacacacagcagacagacagtggtggTCAATCACAGACTGATTCTCTCCCTGCAGACAGTACCAGTGACCGTTCTCAGTCCTCACACAAGGCTACCTCTGAGCCTCTGGtcccccctctgtccccccctGTGTCACAGGCAGCAGCAGCCCAGGGAGGCATGGGTGACCTAATTTCGACCCCAGAGCCCATGTCTAGCCACATTTCCGTCCCAGACCCGGTGAAACTCACCCTGCTCCAGGCCAGTCCCCTGCCCCAGAGCCTTCAGCTGGCCCACCAAGGCTGTAGCGTCCAGATCAGGGAGGACGGGGTCCATATGGCCGGGCCTGACCGGCCAACGCTGGAGCAGTTGAAGAACGCTGTGTTGGAGTTCCTTGGGGGCGTGGCCCAGGCTCATCTCACCTTTGACCCAGAAAAGGCCCACTTCCTGGCCAAACAGGAAGTGATGGACAGGCTGCTACAAACGTTGAAAGAAAACGGGCTGCCGTCCATGTACACTGTGTCGGACTGTGTCGTCATGGTAACGTCTCTGTCTCCCAGCTTGGTGAGCCAGGCATGTAGCATGTTGAAGACTCTGCTGTCTGACTTCAGTATCCCTGTGGACAGAGCGTACGAGTGTATGCTGTACGCCCAGGAGTGGACTGGCTTCCTCCAGTCTCTGACTCTTTGCTCAGCTAAGGTGTCCGAAAGAGGACAGATAGATGTCCTGACtctgagagggttggaggaggagaaGCAGGCTAAGATAGTGGAGTTCCTCAGTACACCCATTGAAACGGAGGCTATCATCTCTATGGAGTCAGGAATGTTGAAGTACATCCAGACCCACCATCATCAGCTACTGGCTGATATGAACCAGGTGTCTATCTTCCCTCTAGACGCACATGGCGTCTGTGGACTCAGAATCCAAGGCAATGCTGCGGCATGTCAAATGGCCGATGAGGTTCTGAGGGGCGTGGTGTTGTCCACCGAGACCAGAACCATCACGGTGAAACAGACGGGCGTGGCGCGGTTCCTCATCCAGGAGGGGGAGGGGACCAGCATCCTCAGGGAGATGCAGACTAAGTTCCAGGTCTACATAAACATGGAGAAGGTGCACTGGGAACCCCTGGACAACGAGGACATCTTTGAGGCTGCATGGAATATGATGTCCCATCAGAGCTTCCAGAGAAGTTCCTTACAGGCCTCAACATCAGTTCTGACTCGCACTATCCAGACTTCCAACAGCCTCTCAGCTTTAGACAGAGGTCGTATAGAGGAGGCAAAGAGGCTGTTCTCAGCCATAGATGAGACGGTGGACTCTGGCCTCTCCGGTTTGACCGGAACCACTGACATGGAGGAGGATCTGTTTCCGGCCGAGAAACCCATGGCCCCGAgctctgaccagggcccagacaGGGACAGCGCTAACgttgaggtggaggaagaggctcCACTGCCCCTGGTGGAGGGAGGGGATAGTGACGATGTGGGTGCTACTGCTCCTGTGGTGACTCAGGATGGAGAGATGTCCCGGGCCATGCAACTCTCCACTACCCTGGAGGAGGAGGCGCAGATGTCCCTGGCCATCCAGTACTCTATGGAGACCACCAAGAGGTCCCTggctgatgaggaggaggagctgcAGAAGGTTCTAGAGCTGTCCAGGAAGATAACGAAGATGACTCGGGATGATGGCGGTGCCATGCCTACCGCTTCCCTCCCTACTGCTGGCTCCCACCTCGATCAGGCTGTCCAGGTATCTCTGCAGGAGGCCATTCAGTCAGCCAACTCGGCAACAATCTTTGTGTTCGCAGGCTACAGTTGTGACCTGGTCAGAGTGGACATTGCCCTGAACAAGAGGGTCAGTAATAAACAGCATAAGGAGAAGCTAGTGCACCGCAGCTTGAGGAGCCTGTCTCCGTATCacagGTGGTGTCTGGACCTCATCAAGAGGAAACACGCCGTGGAGGTCACCATCCAGGGAACTACGGCAATCATCTCCGGGTTCAAGGACTTTGTTACCGGTGCGATGCCGGACATGAAGCTGCTGCTAAGGAGGATCTCCACGACGACGTCAGACGCTGACATCCTGCGGACAGTGCAATGGGTGTGGCACGACCCGGCGTCGTCAGGGACGGAGACCCCGTACGCTCCGGAGGCGACAGTGTTCATGGAGAACGCCTGGAAGATGAGGCAGGAAAAGATCGACATCCTGCTCAACAACCTGCCGCACATCATCAACTTTGAGAAGATGCAGGAATACAACTTGGCCTCTGGGAAGTCCCTCACCATCTCCAGGAAGATGCTGAGCTCCGATGACGTGATCTCGGAGATGCAAGATGAGGACTACAGTCTACTGTCCAACCTGCCTGAAACGTCCAGAATGAACAAGGATTCTGATGAGTTCCGGGATGTTGTGAAAGACTTCTACGACTCCATACAGGAGTTCCACAACGAAATCCGAATCATTAAGGTTGAGAAGCTGATGAATAGGCTCCTGTACAACCAGTACAGACTGAAGAAGGCTAGTATAAATCAGAGTACCACTGACCCAGAAGTGGAGCGGACTCTGTACCACGGCACAAGCGAGACCAGCGTGAAAGAGATCTGTGTTCATGGCTTCAATAGAAGCTTCTGTGGAAAGAATGCCACTGTGTACGGTCAGGGGGTCTACTTTGCTGTGAACTCGGCCCTGTCCGTCCAGGATCAATATTCTCCCCCCAACGCAGACGGACACAAGTTTGTGTTTGTGACCAAGGTGCTGACTGGGGACTTCACTCAGGGCAGTCACTCCATGAAGACGGCTCCTCTGAAGGAGAGCTCTGACATACCCCTCCGATACGACAGCGTGGCAGATAAGACGGACAACCCCTCTCTGTTTGTGATCTTCAACGACACACAGGCTTACCCTGAGTATCTCATCACATGTCAGAAGATTCACCGCTGAGGGAGTGGGAGTTGATTGATATCCAAAGAACTGTTTGGTCAGTGTTTTATTTGTTGGTTTTCTCCGTGTTGAGAAAAGAGGATTCAAATAAAAtagtatttgtcacgtg

Function

NR:

description
poly [ADP-ribose] polymerase 10-like

GO: NA

KEGG:

id description
K15261 PARP10_14_15; poly [ADP-ribose] polymerase 10/14/15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952941.1 False 3566 mRNA 0.54 10 46061044 46071209
XM_021572245.2 True 4435 mRNA 0.53 12 46061044 46074477

Neighbor

gene id symbol gene type direction distance location
LOC110496377 LOC106588592 coding downstream 4093 46039651 ~ 46056951 (-)
LOC110496375 LOC106588593 coding downstream 32246 45911856 ~ 46028798 (-)
LOC110496374 LOC106570224 coding downstream 170776 45856733 ~ 45890268 (-)
LOC110496365 LOC106588581 coding downstream 498877 45475935 ~ 45562167 (-)
LOC100499581 LOC106588577 coding downstream 688071 45369569 ~ 45372973 (-)
LOC110496379 LOC106588596 coding upstream 6020 46080497 ~ 46142731 (-)
LOC110496382 LOC106588622 coding upstream 502981 46577458 ~ 46640870 (-)
LOC110496383 LOC106588620 coding upstream 598037 46672514 ~ 46756077 (-)
LOC110496384 LOC106588605 coding upstream 704618 46779095 ~ 46822848 (-)
trappc9 trappc9 coding upstream 782984 46857461 ~ 47141015 (-)
G1554041 NA non-coding downstream 139290 45921443 ~ 45921754 (-)
G1554026 NA non-coding downstream 157506 45903333 ~ 45903538 (-)
G1553990 NA non-coding downstream 209304 45851427 ~ 45851740 (-)
G1553988 NA non-coding downstream 210714 45849984 ~ 45850330 (-)
G1553721 NA non-coding downstream 227093 45833711 ~ 45833951 (-)
G1554172 NA non-coding upstream 143543 46218020 ~ 46218324 (-)
G1554213 NA non-coding upstream 149455 46223932 ~ 46286906 (-)
G1554248 NA non-coding upstream 212490 46286967 ~ 46288146 (-)
G1554252 NA non-coding upstream 218909 46293386 ~ 46293594 (-)
G1554262 NA non-coding upstream 225285 46299762 ~ 46299971 (-)
G1553693 LOC106588587 other downstream 257996 45788099 ~ 45803048 (-)
G1553544 NA other downstream 393304 45667361 ~ 45667740 (-)
G1552866 LOC106588536 other downstream 973258 45047680 ~ 45087786 (-)
G1552875 LOC106588536 other downstream 987704 45065134 ~ 45073340 (-)
G1552768 LOC106588550 other downstream 1232236 44820763 ~ 44828808 (-)
G1554091 NA other upstream 26771 46101248 ~ 46108102 (-)
G1555168 NA other upstream 837500 46911977 ~ 46912915 (-)
G1555543 NA other upstream 1469083 47543208 ~ 47546614 (-)
LOC110496837 LOC106588626 other upstream 1830362 47890580 ~ 47945574 (-)
LOC110496401 LOC106588640 other upstream 1908406 47982726 ~ 47986560 (-)

Expression


Co-expression Network