LOC110496384 (LOC106588605)


Basic Information

Item Value
gene id LOC110496384
gene name LOC106588605
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 46779095 ~ 46822848 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572253.2
TCTTCTATTTCTGAGCTGTATTTCTGGATTCCACACAGTCAATTAATTATGTGCGAATGGGGGGGGATGGTTCGTTGTTAAAAATAGCCTGCCACTTGAGGATGAGGCGCCGAAATGAACAGGTTGCTGCTTATTGAAACTTACTGGGAGCAGATGCGAAAAGATGGTTCACCCTCATCTAACCTCTCGTGGATCGGTTCACTTCTCTTTAAATCTTCCAGGAATGCATGACATACAACCTGAAAATACTGCATCAAACATTTACAGATTCACAACGAAAATAATCGAACATTCATTTGCCATATGTGTTTAATTGAATTCGTTATAAAAACGTTGACTTCGATAAGAAGACAACAGAGGAATCTAGCAACTGCTTGTTGATGGCACTACGCGCCGGGAGGACTTGGTTTGGGCAGGTTTTGCGCAGAGTTTCTAGGCTGCAGGGCTCGTGGTCCCGGAGATCGAGCAgtcttctgtgtctctctgcgAACCCGGAGCAGGATCTGGGGACCTGTTACAGGGATCACACTCTTAGCAATCTCCACTACTGCTCCTCCGTCCACCGTCACCAACACGCGCCAGTCTGTCCCTCCTCTTCCAGCCGCTGCCAACGCTTTCCCGATTGCTGCGCAGCCTTCCCGGGGGATACGAGGGGACATGAGCCCCTCACTCGCCGGATCCTGGTGGTCATGAAGCGGCAGAACGTGCGGACCTTGTCCCTGATCATCTGCACGTTCACGTACCTGCTGGTCGGGGCCGCGGTGTTCGATGCCCTGGAGTCAGATTTCGAGATGCGGGAGAAAGAACAACTGGAGGCAGAGGAGAAGCGTCTCCAAGGGAAATATAACATTAGCGAGGACGACTACCGCAAACTGGAGACCATCATTATGGAGGCCGAGCCCCACAGGGCTGGGGTTCAGTGGAAATTTGCTGGATCTTTTTACTTTGCCATCACAGTCATCACCACCATAGGTTATGGCCATGCAGCTCCCGGCACAGACGCGGGGAAGGCCTTCTGCATGTTCTATGCCGTCCTGGGGATACCCCTGACCCTGGTCATGTTCCAGAGCCTGGGCGAGAGGATGAACACCTTCGTCAAGTCCCTCCTGAAGCGCATCAAGAAGTGCTGTGGCATGCGCATCACCGATGTTTCCATGGAGAACATGGTGACGGTGGGGTTCTTCTCCTGCATCGGGACGCTGTGCATCGGGGCGGCCGCCTTCTCCCACTACGAGGACTGGAGCTTTTTCCAgagctactactactgcttcatCACACTGACTACCATCGGATTCGGGGACTTTGTGGCTCTGCAGAAGAACCGGGCCCTGCAGCGGAGGCCCCTGTATGTGGCCTTCAGCTTCATGTACATCCTGGTGGGCCTGACTGTCATAGGAGCCTTCCTCAACCTGGTGGTGCTGAGGTTCCTGACCATGAACAGTGAAGACGAGAGGCGGGATGCCGAGGAGAGGGCCTCGCTGGCGGGGAACAGAAACAGCATGATCATCCATATCCAGGAGGAGacactggggagaggaggaggtgccAGGAGGAGGCGCAAGGAAACGCAGGGCCAGTACTGCGCCGAGGTCACCGACCTGCCTTCTGTATGCTCCTGCATGAACTACCACTCACATGAGTTTGGTAGCtgtgggggagggatgggaggagggatAGGGGGCGGAGGGATGGGCTGTGCCTTCTCCCACCAGAACTCCTTTAGTTCCCAGTTGAACCCCCACCAGTACTTTCACTCGGTGTCGTACCGCATCGAGGAGATCTCTCCCAGCACCCTAAAGAACAGCTTCTTCCCCTCGCCCATCAGCTCAGTCTCCCCAGGCCTCCACAGCTTCACAGACAATCACCGACTCATGAAGAGAAGGAAATCTATCTGAGCTGTGGCACTGCCCATCTGAGCCAAGTGGAAAATAGTGTTTTGAACTACATGTTGCATTTCAATGTTTTTGCCTAAATGCTAAAACGTTGAATTGGAACAGATCATCAGACTGGGTTGGCTTGTCTACACAGGCAACTCCTAGCTTTCCTTTTTATATACAAGTACAATGCATCTCCAATGCTGCTCCAAACCAAATCTCATTTTAGcacttttgttttgtttcttttgGTTGGTCTAAGGATATAATGTATTGAAGCGATTCGCAGGGATTGATTGAAGAGGAAGGAGCGTTGGAAAGAAATGGCAAACTTGTTGGACATGAATTATTACATTCATTTCTTGTGAGGGATTCAAAGCATGAAGCATGGATACTTATTCTCCCAGGAAATTGTCCCATCAGAGAAATACTAACCAGAACCAACAGATCTTGTTATACATTTTCATATTGCCGGCTCACAAAGATAATATAGCACCCTGGTAACAATGTACCAAATGATGCACACTTAGCATTATAAGGGggatatgtatttttttaaagtgaGCATGCCTGTTTCACCTTAACTTAAAATGATTGCAGTTAAGTGCTTTTCCTCCATTGCATCATTGCAGACAGAGATGATACAATTTGAAATGACATCAGGTATTATTTTCTATAAGCAATTCTagggaaaaaaatgtaaatgatttGTTCACAGAACATCATGCCAAAATATTGTTGCCAATCTTAGCATGTGCATTAGATGTCATCAAATGAGTGTGCCATAATTATTTTATgtattttgttaatttttttaaacagcagATTTGTATTATTATGGTTTGTGTCTGTAGATGTTTTCTTTCTGGATTTCAGATGatgattatttttttataattCAAGAAAATGTCAGTGTAAAATATGAGGATGTGAAAAGGAATAAGCACGGATTTGAAGGCTTTCCAGTTCGAAAAAGTTGCTATGTGCATGTACTTTGCGAAACTGGTATGCATATAGATGAATGGGGAAAAATAATAGCCTTGCAATTGAAATGAATTTTGATAGCAAATAATCATAATAATtatttaaaatataatttatttatttagccaCTTAAAAGTAATGATGTATAGTGTAGGCTGAACAGTTTATTCGCTTTTCCATAATTTTTTCATTCGGAAAAATTGTACAATAACCTTTGGTCTCAGGTTTTGAATGGATAGCCTCTTCAGGTTCTGCTCCCCGAATCAAATCACAGAATAAATCCCATAAATGCGAATGCACCTGCCAAACAAAACAATACATATTAATTAATTTTTAAAAATAGTACTAATTTTCCAGGAAAAGGATATTGAGATGCATCATCTTACTAAGGGAAACTTGCTGTACTATAGAGAAGCGTGGGTTCagtgtgcacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactgtatcaaGCCATAGAGGAGCAGGCCATGGAACCACTGCTATTCTGTAAGGATATTAATGTTGATGACAGGTGTAATCCAAACTTCAATTGTGCCACTGAGAATATATACACGCCTATAGCCTACGAACACAATGACAGGCATTTGAGATGTATACAGTGATGTCATCACTGGCTGTCATTTAAATTCAATGACAGCCAAATGGCAATCAATGGGTGAAAAAGGACCAGATGAATTTCTGAAGGAACAATGCAATACTGGGCATTGATTCATTTAGCACAACATGTGCCATTTAAGTCACCCACATTGATAAGTGATAAATGCCATGGATACCATTAGGCCGAtttccattgacccaggtttattAGTAATCAAAAGcaatgttgaaaaacaaatatttgCGACGTGTAATGGAAACGGCAAACATTGGAGAAATTGTCTAAAGATCGACAAAAATTGTATCCATTCTACAGGGGTGGATTTACATTTTGCCTAAACTTTCTTCATTGTGACAAATGATGACGGAAATGGTGATTTACGAATAAATGATAACTGCCAAATGATTTTGTCATCACGTAGGTTAACTATAGAGCTTTACTTCACATTTCATTCTAAATGCCAACTGCTTGCTAAATGTATTTTTTCAACTATAAAATAATGGTTTCTTTTCAGGAAAAGGACtgtcctgactttcaagaatgcctgaaTTGCTTCGCCTTGCTTTTCTggcaagtttcaccatccaattataTCAGATCTACAGGAGTTTCACCATGGCAAGGACCTTGGTCGATATGTTGGCAGATGAGAATTATTACAATATGGCAAGTATTAGTCAATTCCtgcattctatccatgctggctttcgcaggctacctgagacatgaaagaGATTGGTGGGAGGGAATACAGGCTGTCGTCAATGTATTAACAAGCAATTTGATTAAAAGGGTAATGGAAACAATTCAACCACTACATTTTTATTCGACACTAGGGTTATGCGAAAAAAgtcgttttttttgttttgttgatgtgacGTCATTACGTCCTTCTGTTTTTATCGACAAGATAGTTCAATGAAAACGCACCCTAGCAGACAACTGTCGCACAAACGGTATTTTCTATGCGAACTTTCTAAACATCGACAAAAAAATCTCTGGACAGGTTAATGGAAACATAGCTTGTGTCTGTCTTGAATGAGAATAACGAAAACTATTGTAACATTAACATCCAAGGTTCTAGATTGTTCAGATGACCCCAGGAATACACATGTAAATATACAGTACTTTATATCATATATTGTACGTTCTCATCCTTTGGAATAAAACGGCCTTTCCACAGCTCCGATGCGTTACTATTTGTACACATTTTAGAATATGTGCCTTTAAGAAACACTATTTCAATGTTTCTATACCTGTAGGCACATTTTACATCTGAGAAATATATCCAACCTTTTTCCTTATAAAATATGTATCCATCTCTAAGGATTCATGTAGCTTCATACAAATAGAATAACCAAAGCAAAGATTGTGTTTTTTTTCGgcaaaccacacagacacaatccagcTGATTTACAACGTCCAAATAATTTATTTAGGCAGAACTGCCGTAGGTTTGTCCAATTATTGGGGGAAATGATTTGGAATAGCTGGAAAATTCATTGTTTCACATTTTTGCGAAGATACCACATTAGTCTTTTCTTGGTGTAGCTGGTGGACATGCACATGGATATTAAGGGTTGAGAGTCAATGTTAAAGCCATTTTTAGCAATTATGAGTCAGTATTGCACATATTCAATACATCTCTATAATTGTGTTTGTATAAAGTGCATACCAGCATTTGAATGATCATACCATAGTGAGGTGATGCCAACATGATAATGATGTACAATGATTTACCAGAGAGTAAAACAATCATTGTTACTGCCATGAAATGTGCCATATTAACATGCATGGATTAATGCTGAGTGAGTCAACAGATAAATGTTTGTTAAGAACGATATAAAATACATTGTACGAAACGAATTGATTGTTGGTGCCAGCCTTTATATTAGTTGTTGAGTTATCCCCGCTCTTTTGAAATGATATGTTTACCTCCAAGCTGTGCAGCCAGACACATAAATAGTACCTGTATGACTTGGCTGGTCTGGATTGAGATGGTTATTGGTCGATCGTTCTGGATTCTGTATATCCTCCTGATGCCTGTGGTTTAATGTGTCCAATATCTCCATGTGCTGGCCAGATCTCTATCTGTCCAGATGTCCACAGTGCCAAGTTCTCCTATCACTGGGACAAAGACACACATATTGCACAACTAACTAACTATCTGTGTCATAATACACTCTAGAAGGCTGTTGGGTTATTTGTATGATTCCATGTTACTTTTTCTTAATATCTCTAATttcttttaataaaaaaaaagatcCTTCCTTtgcaatataatataattatgttTTTTAGGTCTGACGAACAAATGCCATGTACCATGTTTATTTGAAAATGATGAAAATGTTAAATGCATACCATCTCCAAAGGACAATGTTATATCAATTTGGTTCAACAAATGACCAAATTGACCCAATTAACATTTTTGTTTCACAGTTTTGGAAAACTATTTTCACTCCTGATGTCAATACATGCAGCGATATGGGCTTTCTCTTTTCAATAAATGGGAAAGAGCAACTTGTTGAGAGAGTAAACAACCATTTATGTTCATGTTTTCATTTTTGTGTGTGCATGATTTGGTGTGGTGACTTCCTGGTCAGGTGACCTGGGTGAAGCAATGACACCACTTGAATAAAAACTATGAGCCTCCTTCTCACAAGCCCCAAACCCTTTgactctggtctgtctggtcatACACTACTGTAAATCTATTAAAA

Function

NR:

description
potassium channel subfamily K member 9-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005267 potassium channel activity molecular_function

KEGG:

id description
K04919 KCNK9, K2P9.1; potassium channel subfamily K member 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572253.2 True 6255 mRNA 0.41 2 46779095 46822848

Neighbor

gene id symbol gene type direction distance location
LOC110496383 LOC106588620 coding downstream 23018 46672514 ~ 46756077 (-)
LOC110496382 LOC106588622 coding downstream 138225 46577458 ~ 46640870 (-)
LOC110496379 LOC106588596 coding downstream 636364 46080497 ~ 46142731 (-)
LOC110496378 LOC106588595 coding downstream 704618 46061044 ~ 46074477 (-)
LOC110496377 LOC106588592 coding downstream 722144 46039651 ~ 46056951 (-)
trappc9 trappc9 coding upstream 34613 46857461 ~ 47141015 (-)
LOC110496386 LOC106588618 coding upstream 325444 47148292 ~ 47153777 (-)
LOC110496387 LOC106588616 coding upstream 335117 47157965 ~ 47162827 (-)
LOC118940995 NA coding upstream 402148 47224996 ~ 47228743 (-)
LOC118941173 NA coding upstream 416284 47239132 ~ 47241438 (-)
G1554790 NA non-coding downstream 53531 46725225 ~ 46725564 (-)
G1554774 NA non-coding downstream 74972 46695415 ~ 46704123 (-)
G1554758 NA non-coding downstream 120375 46658193 ~ 46658720 (-)
G1555114 NA non-coding upstream 3977 46826825 ~ 46827112 (-)
G1555116 NA non-coding upstream 7227 46830075 ~ 46830277 (-)
G1555142 NA non-coding upstream 37050 46859898 ~ 46860396 (-)
G1555195 NA non-coding upstream 153781 46976629 ~ 46977092 (-)
G1555238 NA non-coding upstream 215508 47038356 ~ 47038765 (-)
G1554091 NA other downstream 670993 46101248 ~ 46108102 (-)
G1553693 LOC106588587 other downstream 976047 45788099 ~ 45803048 (-)
G1553544 NA other downstream 1111355 45667361 ~ 45667740 (-)
G1552866 LOC106588536 other downstream 1691309 45047680 ~ 45087786 (-)
G1555168 NA other upstream 89129 46911977 ~ 46912915 (-)
G1555543 NA other upstream 720712 47543208 ~ 47546614 (-)
LOC110496837 LOC106588626 other upstream 1081991 47890580 ~ 47945574 (-)
LOC110496401 LOC106588640 other upstream 1160035 47982726 ~ 47986560 (-)
G1556577 NA other upstream 1533765 48356613 ~ 48356847 (-)

Expression


Co-expression Network