LOC110496393 (LOC106588612)


Basic Information

Item Value
gene id LOC110496393
gene name LOC106588612
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 47326949 ~ 47328359 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021572268.2
AAATAAGACTCGGTCTACTGGAGTTGTCAGACAGTCAGAGCTGCTGATCACGCTGCTGGACAATATTTCAAAGCGAGAATGTGGCTATTCTCACGTCTGTAGCATAGCTCTGTAAAGCCTCCGCACTGGGGACATCTTATCAtctattgattgattgatacttTATTGATCCTCAAAGGGGAATTCTCCATGATGTTTACTGTTGAAGAGATGAAGAGCACCTGTCACTGTTCAGGTTACCGGAAGCAACAACATCAGCCTCACACCATCCTGTACAACATCCTGAGCCGGGCAGACAGTAACTACAGCAACAACGACAGCCTGATCAACAACAACCAGGTGAACCAGTACAACTACAATAAGATGATGCCTCACAACTGTCACTGCAAGCGGCAACGGGCGGTGTGTCTGAAGAACCCTGAGGGAACCTGTCAGATGACATCTGATGTTCTGGTCAAAACCATCTGCTTCATGAAGAGTTTACCCTCCTTCAGTCAGCTTCCAGCGGAGGATCAGCTATCTCTGCTGAAGGACTGCTGGGTGCCCCTGTTCTCTCTGGGCCTGGCCCAGGAACGGACTGTGTTCGAGGTGAAGGATGTTCCACAGGCTAGCATGCTGAGGAGGATCCTCCTCAACGGTCAGGGGCCACAGAGTGAGGAAGAGCAGGAGGTGGAAGATGAGGGGAAGAGGTTGCTGCCCACCCTGGCTGGGGTGCATAAACTCAGGTCCTGTCTGAACAGACTGTGGACTCTGGATCTCAGCCCAAAGGAATATGCCTATCTGAAGGGAGCTATGCTGTTCAATCCAGACGTCCCAGGACTGAGCACCACTGTATTCATCAACAGTCTCCAACAGGAGGCCCAGAGAGCTCTACGGGAGGTTGTGCTGACCCTTCACCCAGGAGACTTGGGTCGATTCAGCTGCATCCTACTATCGACCTCTGACTTACAGACTGTCAGCCAATCACTCATCACAGAACTGTTCTTCAGACCTGTTATTGGTCAGGCGGATCTGTTTGATTTGTTACGCGAGATGCTGTTTATTAGACAAGAATAAagctgaaagtgtgtgtgtgtatgtgtttgaatTATATTTTAGGGTATTTTCTACCGTGACAACTATGAACGTGAAGAATGCAACCAGGCAATAAAAGTTCAATAAACTAAA

Function

NR:

description
nuclear receptor subfamily 0 group B member 2-like

GO:

id name namespace
GO:0009987 cellular process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021572268.2 True 1167 mRNA 0.49 2 47326949 47328359

Neighbor

gene id symbol gene type direction distance location
LOC118941176 NA coding downstream 34741 47258150 ~ 47292208 (-)
LOC118941174 NA coding downstream 75982 47248660 ~ 47250967 (-)
LOC118941173 NA coding downstream 85511 47239132 ~ 47241438 (-)
LOC118940995 NA coding downstream 98206 47224996 ~ 47228743 (-)
LOC110496387 LOC106588616 coding downstream 164122 47157965 ~ 47162827 (-)
LOC110496398 LOC106588638 coding upstream 308162 47636521 ~ 47647411 (-)
LOC110496399 NA coding upstream 478720 47807079 ~ 47808361 (-)
LOC110496837 LOC106588626 coding upstream 562221 47890580 ~ 47945574 (-)
LOC110496401 LOC106588640 coding upstream 654367 47982726 ~ 47986560 (-)
LOC110496402 LOC106588641 coding upstream 673527 48001886 ~ 48022110 (-)
G1555467 NA non-coding downstream 926 47321146 ~ 47326023 (-)
G1555458 NA non-coding downstream 22651 47303843 ~ 47304298 (-)
G1555456 NA non-coding downstream 25421 47301182 ~ 47301528 (-)
G1555454 NA non-coding downstream 27439 47299281 ~ 47299510 (-)
G1555331 NA non-coding downstream 105993 47220732 ~ 47220956 (-)
G1555469 LOC106588611 non-coding upstream 4229 47332588 ~ 47410478 (-)
G1555473 NA non-coding upstream 10212 47338571 ~ 47376258 (-)
G1555531 NA non-coding upstream 152986 47481345 ~ 47481802 (-)
G1555532 NA non-coding upstream 159930 47488289 ~ 47490122 (-)
G1555542 LOC106570245 non-coding upstream 176943 47505302 ~ 47505882 (-)
G1555168 NA other downstream 414034 46911977 ~ 46912915 (-)
G1554091 NA other downstream 1218847 46101248 ~ 46108102 (-)
G1553693 LOC106588587 other downstream 1523901 45788099 ~ 45803048 (-)
G1553544 NA other downstream 1659209 45667361 ~ 45667740 (-)
G1552875 LOC106588536 other downstream 2253609 45065134 ~ 45073340 (-)
G1555543 NA other upstream 215201 47543208 ~ 47546614 (-)
G1556577 NA other upstream 1028254 48356613 ~ 48356847 (-)
G1558535 NA other upstream 2639537 49967896 ~ 49968608 (-)

Expression


Co-expression Network