Item | Value |
---|---|
gene id | LOC110496395 |
gene name | LOC106588635 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048582.1 |
NCBI id | CM023236.2 |
chromosome length | 74657750 |
location | 47405537 ~ 47517686 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
AT-rich interactive domain-containing protein 1A-like isoform X2 |
id | description |
---|---|
K11653 | ARID1; AT-rich interactive domain-containing protein 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021572270.2 | False | 8811 | mRNA | 0.59 | 19 | 47405537 | 47517686 |
XM_021572271.2 | True | 8802 | mRNA | 0.59 | 19 | 47405537 | 47517686 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110496394 | LOC106588610 | coding | upstream | 39044 | 47361958 ~ 47366493 (+) |
LOC110496392 | nudc | coding | upstream | 65691 | 47329603 ~ 47339846 (+) |
LOC110496391 | LOC106588613 | coding | upstream | 84265 | 47317827 ~ 47321272 (+) |
LOC110496390 | NA | coding | upstream | 123524 | 47279653 ~ 47282013 (+) |
LOC118941175 | NA | coding | upstream | 133057 | 47270121 ~ 47272480 (+) |
LOC110496396 | LOC106588636 | coding | downstream | 6104 | 47523790 ~ 47533373 (+) |
LOC110496397 | LOC106588637 | coding | downstream | 16091 | 47533777 ~ 47545346 (+) |
LOC110496400 | LOC106588639 | coding | downstream | 283127 | 47800813 ~ 47826805 (+) |
LOC110496404 | LOC106588645 | coding | downstream | 556207 | 48073893 ~ 48109017 (+) |
LOC110496405 | LOC106588646 | coding | downstream | 614624 | 48132310 ~ 48140645 (+) |
G1555369 | NA | non-coding | upstream | 76417 | 47328788 ~ 47329120 (+) |
G1555367 | NA | non-coding | upstream | 94872 | 47310436 ~ 47310665 (+) |
G1555366 | NA | non-coding | upstream | 103037 | 47302286 ~ 47302500 (+) |
G1555341 | NA | non-coding | upstream | 144299 | 47251337 ~ 47261238 (+) |
G1555054 | NA | non-coding | upstream | 231328 | 47173920 ~ 47174209 (+) |
G1555436 | NA | non-coding | downstream | 20629 | 47538315 ~ 47538642 (+) |
G1555437 | NA | non-coding | downstream | 21085 | 47538771 ~ 47538998 (+) |
G1555580 | NA | non-coding | downstream | 44564 | 47562250 ~ 47562495 (+) |
G1555672 | NA | non-coding | downstream | 101443 | 47619129 ~ 47619409 (+) |
G1555679 | NA | non-coding | downstream | 108365 | 47626051 ~ 47626280 (+) |
LOC110496389 | LOC106588614 | other | upstream | 203501 | 47200301 ~ 47202906 (+) |
G1554912 | NA | other | upstream | 488577 | 46911533 ~ 46916960 (+) |
G1554852 | LOC106588605 | other | upstream | 583053 | 46822126 ~ 46822484 (+) |
G1554410 | NA | other | upstream | 765428 | 46577330 ~ 46640109 (+) |
khdrbs3 | LOC106588624 | other | upstream | 998024 | 46301213 ~ 46444565 (+) |
G1555433 | NA | other | downstream | 10059 | 47527745 ~ 47528039 (+) |
G1556007 | NA | other | downstream | 382783 | 47900469 ~ 47901628 (+) |
G1556006 | LOC106588626 | other | downstream | 385169 | 47902855 ~ 47903371 (+) |
G1556003 | LOC106588626 | other | downstream | 386163 | 47903849 ~ 47905387 (+) |
G1556127 | NA | other | downstream | 556950 | 48074636 ~ 48112652 (+) |