LOC110496399


Basic Information

Item Value
gene id LOC110496399
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 47807079 ~ 47808361 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110496399
ATGGCCTTCTGGAAGGCCTTGAAAGGGACAGCTATCATGCGGACCGGGACGGCCGCTGCTCTTCTGGGCCTAACACAAACTGTCAGAATACAGAAAGCCACAGAATAAATGGGCACAGGCTGGTGTATGTAGCAGCGGAAGGGGGAATTACAGCAGCCATTTAAAGATGAGCTCCCAACCAGAAAGGTTCAGCTCTCCACCCTGCAAGACACTGAAGAGTTTGATGTCCTCGTCATAAGGGGACAGGCCGCGAGCTCCGGATGTGTTGTCACACGTAACCTTAAGACTGCCCTGGTGGAGAGGAATGGTTTCTCATCGGGGACCAGCAGCCGGAGCACCAAGCTCAGCCACGGAAGAGTATACTACCTCCAAAAGGCCATTATTACATTAGATTATGCAATACATGATGGTGAAAGATGCTCTCCATGAGCGCTCCAACCTGCTAGACATCGCCGCTCATCGCCCCACTACCCATTATGTTCCATGTTTACAAATGGTGGCAGCTGCCATACTACTGAGCTAGTATAAAGATGTAAGACCTGGTGACTGGAGGCCAGTGTCTGAAGAGTAGCTCTGTCCTCAGTAAGAACAAGGCCCTGGAACTCTTCCCCGTGCTGAAGAAAGACAAGCTGGTGGGAGCCATCGTCTACTATGATGGACAGCATAACAATGCAGATTGCCCTGACAACAGCCAGACACACTGCTGCAATCGCTAACTACAGTACACAGAGGTGGTCCACCTGCTGAAGAAGACAAGTGCTGAGATGGGCAAGGAGAAGATCTGTGGGGCACGCTGCAGGGACGTTATCACAGGAAATGTATTTGACGTCAGAGCCAAATGTGTCATCAACTCCACGGGACTGTTCACTGACTCTCGAAGGAAAATGGATGACGGGAAGAACGCTAAAATCTGTCAGCCCAGTGCTGGGGTTCACATAGTCATCCCTGGTTATTACAGTCCTGACATGATGGGTCTCCTGGACCCGGCAACCAGCGATGGCCGTGTCATGTTCTTCCTGCCCTGGGAGATGATGACCATCACGGACGACGGGCCCTCTGACGTCACTGCCTACACCATCCCCAGAGAGGAAGACATCAGCTTAATTCTGAACGAAGTCTGCAACTATTGTACCTCAGCCCTGATAtagaaaggagatgagaggagaggaaacgtcCTGGCAGTGTAGGTTGGTATCCATCCTCTGGTCACTGAGCCCAACTCTAAAGACACTCAGTCCATCTGCAGGATCCACAGTGGCCTGGTCACCATTGCAGGAGGGTAG

Function

NR:

description
PREDICTED: glycerol-3-phosphate dehydrogenase, mitochondrial-like isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110496399 True 1283 mRNA 0.52 1 47807079 47808361

Neighbor

gene id symbol gene type direction distance location
LOC110496398 LOC106588638 coding downstream 159668 47636521 ~ 47647411 (-)
LOC110496393 LOC106588612 coding downstream 478720 47326949 ~ 47328359 (-)
LOC118941176 NA coding downstream 514871 47258150 ~ 47292208 (-)
LOC118941174 NA coding downstream 556112 47248660 ~ 47250967 (-)
LOC118941173 NA coding downstream 565641 47239132 ~ 47241438 (-)
LOC110496837 LOC106588626 coding upstream 82219 47890580 ~ 47945574 (-)
LOC110496401 LOC106588640 coding upstream 174365 47982726 ~ 47986560 (-)
LOC110496402 LOC106588641 coding upstream 193525 48001886 ~ 48022110 (-)
LOC110496403 LOC106570256 coding upstream 229497 48037858 ~ 48049720 (-)
LOC118941177 LOC106588644 coding upstream 248661 48057022 ~ 48062162 (-)
G1555928 NA non-coding downstream 20010 47786857 ~ 47787069 (-)
G1555925 NA non-coding downstream 24305 47782527 ~ 47782774 (-)
G1555922 NA non-coding downstream 30061 47776722 ~ 47777018 (-)
G1555915 NA non-coding downstream 43874 47762965 ~ 47763205 (-)
G1555914 NA non-coding downstream 44180 47762568 ~ 47762899 (-)
G1555960 LOC106570253 non-coding upstream 17187 47825548 ~ 47831937 (-)
G1555985 NA non-coding upstream 55859 47864220 ~ 47864577 (-)
G1556272 NA non-coding upstream 69256 47877617 ~ 47877999 (-)
G1556275 NA non-coding upstream 74138 47882499 ~ 47882735 (-)
G1556276 NA non-coding upstream 74517 47882878 ~ 47883173 (-)
G1555543 NA other downstream 260508 47543208 ~ 47546614 (-)
G1555168 NA other downstream 894164 46911977 ~ 46912915 (-)
G1554091 NA other downstream 1698977 46101248 ~ 46108102 (-)
G1553693 LOC106588587 other downstream 2004031 45788099 ~ 45803048 (-)
G1553544 NA other downstream 2139339 45667361 ~ 45667740 (-)
G1556577 NA other upstream 548252 48356613 ~ 48356847 (-)
G1558535 NA other upstream 2159535 49967896 ~ 49968608 (-)
LOC110496434 LOC106588680 other upstream 2214730 50023087 ~ 50034167 (-)

Expression


Co-expression Network