LOC110496837 (LOC106588626)


Basic Information

Item Value
gene id LOC110496837
gene name LOC106588626
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 47890580 ~ 47945574 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951068.1
GCTTCAAAGAGTGAGTTagcgagtgtgtgagagagagcaagaccaAAACACACAGAGCAATAGACGGAAGGGCAGGGCAGGactagaaagaaagagaaaaagaggtaGAGAACGATGTGAGCCGAGGAAGTAGGAGTGTCTTGGGTTACAGGAGCGTTAAGGCGGTTGTGTTTGTTGGCGAGGATCGTAGCTGGGATCTATTTTTTCCTCAGTGtgtctgtatccctcctctctgccgTGGACCCCAGGAGAGGTAGGGGCTGGTGGGACTGGGGCGTGGGGTAGCATGGGACAGAATGCCAGCAACGCTGAGACAGTGCCCCAGCAACACCAACAGCAACCTCCTCAACACAACACCGatGATGAGGTGGACTTGCAGCAGAGTACGACAGGGAGTGAGGGGGGTGACTCATCAGGTGGAACCCCTCCCTCCAAACGCAAGGGCAAGTTCTCCAGCTTCGGGAATATGTTCAAGCCCTGGaagtggaggaagaagaagagcagCGAGACCTTCCTGGAAACCTCAATAGTGTTGGAGAGGAAGATCTCAGTAAGGAGACCTCGTCAGGAGCTGATTGACAGAGGATTGCTGAAAGAACTGCCGGAGAATGAGGGCAACGACGTGAACCATTCCAAAGGTCCGGTGGTGAAGAATGGCCAGCCAGTACCTGTTGACCGGGTCTCAGAGTCAGGGATCAGGGTGTCCCGGGGGGAGGCAGGCCCAGGGCTCAACCCCACCTGGCTACCCCAGGGAGAGGACCCACGGCGGGGCAGCGTCCCTTCAGACGACCCCCGGAGCAGGAGCCGGGTACCCTCTGACGCCTCGCGCTCCAACCGAGCCCCACTGGACGTAGACTCACACGCCAGGCTATCGGTCATAGATCTGGAGAGACGGAGTAGAGTGCCATCTGacgtgtcagagaggagaggagggtcacTACCGAGAGGACCTGCTCCCGAGGAGGGGAGGCAACGGAAAGAGGATAAAGAGGACAAGCGAGAGGAGAGGCGAGACgggaaagaggagaggcgagacgggaaagaggagaggcgagacgggaaagaggagaggcgagacgggaaagaggagaggcgagacgggaaagaggagaggcgagacgggagggaggagagagacaacagggaAAAGAGAGACCggcgagaggagagggaaaggagggacaGAGATGATCGAGAGAAGAgcgaagagggggagaaggaggacaaggagaagagaggagaaaaagatgacagaagagagggaaaagagagaagagatgatCGTGAGAAAAGAGACGACAGGAGAGATGACCGAGAAAGAAAAGATGACCGGTACAAGATAATTGTTCGTGAAAAGGCAGacgaaaggagagatgatggggaacaaaggggggaggagagggataggaggaggagtCCTCCTAGGCCTGCTAAACCAGAGACCCTCTTGAGACCTTTTGAAGAGGGTCGTCCTGTGGTCAGACTTCACTCTGAGATGGAGCTAAGGCAGAGTCTCCAGAAGACCTCCTCAGAGGACCTCCGTAGCAGGGTCCGTCCTGCCTCTGAGGCTTACCGCGGGAGCACCCTGCCCAGGTACATGCCATCTGAGGAGATCAAAGGAGGGGAGACCCGCGGACGAGCAGAGTCCACTGGTGTCCGCTTCGCCCCTGTCCACACCCCAGATCCTGACTCCTCCCGTAGAGAGCCGCCTCCTACCAAACAGGCCATGCTCCCTCCTAAGAGCCACCTCACTATCACCACCTCCACGGAGCCTGTCCGGAcctccaccccaccctcctcctctacctcccctgctGTAGCTGTGGCCAAGCCCGCCAGGACTGTCTCCCTGATCATCAGTGATGACCCTCCTCCCACCCACTCCAACCCTGTCCCCCCTGTACGTTCCAGCCAGGtacccccctcctccaccacagGGGAATCGGCCACTCCTCCCCCCGTACCCCCCCATGCCAAGCAGCCACCTGTCCCCCCACCCAAACCCGCCAACCGCAACAGCAACCCTGCTCTGCTTGTGTCCACATTGAACAGGGCCTCCAGGGTCCAAGGTCCCCTTTCTCCTCACTACTGTACCAGCTGGAGAAGGCAGGGGGAGCTGGGCCTGTACCTTTCCCTGCCCACCTACCTCCACCGCCGACGGACTGAACAAGCCTGCTCAGCGGAGCTCTCTCAGGCTGGCAGTGGTATCATCGTTGTTCCTGTCCCCACCAGGCGCTCTCCTCCCACTCCGCCCAAGAGGATGACCCCCGTCACCAAGCACCACTCTGGCGACCCGTCCCCTGAGCCAGAGACCTCGGGCCCCTCTGGTTCTGTCCCAGTCCccatacctactgtctctgtaccCCCCAGCACAGACCGAGGCGACACCAGGGACACCCTCAGAGCAGTAGGGTTCCAACTACCCACCTCTGTCCCTGCACCAGCACCCCGACCTCTGTCCCATATACCCACGTCCACTCCCAGCTCCCAACCCCACTTACAGCTCCCCAACCCTGCCTCCGCACCCCTCCCGGTCCCACTCCCCTTCCCTCAGAAGGACCCTCCCAGCCCCACCACAGAGCCGCCCAGCCACcccccagcctcagtcccagccaTCCCCCTTCACATCCTGATCCAGCGGGCCCTGTGCTCCCCCAGCCCGGCTCAGGCTAAACCAGATGGGTCCCAAAGAGCCCACTCCATGCTGTTTGAGTCCCCCCCAGAGTTCCTCACTGAGGCTGGAGGCCGACGCTCCCTACCAGTCACCATAGAACCCCTCAGACTacctgagGATGATGACTTtgacatggaggaggagttggagAAGCTTCACCCTAGAAGGATGCTGCCCCCCAGGCAGCCTGAGCTGGAGCCCAGGAGCAGGAGGGGTCTGGTGGTTGATCCCAGGGTCAGTGTCATCCCAGAGGGCCGGGGGCCCGGAGACAGcagtgaggaggatgaggagacagACTCTGACGGACCCATCCTCTACAGAGATGACGATGAAGACGAGGACGACGATCCACCAAGTGCCTTGGCCAGCCGTGTGACGAGGAAGGACACCCTGGCCCTgaagctggagagagaggagcgggagggaggagagggacaagaCGGAGTCGGCTGGCAGAGCAGAGAGCAGTGGGAGGCACTCAAGAACAAGATCGGTACCACGCTCAACAGGAGGTTGAGTCAGAGACCCACAGCAGAGGAGTTGGAGCAGAGAAACATCCTTCCAGCCAGGAACGAAGCTGATATCAGGGCAGAGCGGAGCGAGATCAAACGCAGACTCACCAGAAAGCTGTCCCAGAGGCCCACCATAGCAGAGCTTCAGGCCAGGAAGATCCTGCGTTTCCATGAGTACGTAGAGTGTACCACGACTCAAGACTACGACCGCCGTGCAGACAAACCTTGGACTAAGCTCACTCCCTCCGACAAGGCTGCCATCCGCAAGGAACTGAATGAGTTCAAGAGCTCTGAGATGGAGGTTCACGAAGAGAGCAGGATCTATACCAGATTCCATCGGCCTTAGCTGTGCTCCCTGGCCCGGCTGCAGAGCAAGCACTTAAATGCAATACTGAGCCGGGGGGTTGCAGGACTGCAATACGGAGCACACAGACCCCTGGTGACTGCAATTTCCACAGCCCCCTGCCCTGGCACAAGCCTGTTCCTCTCCTGTAAGGAACACTGTTGATTGCTACATCTGAAACCGTGGACTAGAGGTGTATAGCCTGTCTAAACATGGACTAGAGGTGTATAGCCTGTCTAACCATGGACAAGAGGTATAGCCTGTCTGTAACCATGGACTATGGATGTGGCCCCTCAGTCTATCCAGTCAGTGTTAAAACCACAGACTAGAAGTGTGGCCTATAGATAAACGACTTGCATCTAAAACCATGGACTAGGGATTTGGCCTCTTGGTCAAACCACTTACTGTTAAAACCATGGACTAGAGGTGACCTCCATCGGTCCAACCCCTTGCATATGAATCCATGGGactactggtactactgtacTCCAGCGTTGATCTGCCTGACCAGACAACCCACAGGGAGAGCTGGAGAAGAACTAGCTGGACGAGGTTTAGTGGTTTAGGCCTATTTCAGCTGCCATTTTGTAGATTCCCTGTGCCAACACTGACTATCAGAATAGGAAGGACAAGAGGGACAGACGGCGATTGTGACAAAGGATGTCCTGTTTTGTTCCTCACATCACCTCCATTCTTTGTCGTTCCCTAAAGCAAGAATGTTCCCAAGAGGCCTTTACTGTACCTGGTTTTTAGAGTTCCTTCAACACTTTGCCCTATTTTTAATTGAGAACAGAAAATAATTGTATACGGTACTGATTGTTGATCATGACGATGGTCAACATTAGTACACGGTAGTATTAATGATTTAATGTTCAACTAAATATGATACAGAACTTTGTTAGACTACATGACGCTGGTGAAACCCTCAAACGTGTGTTTATGGGTACCCAATGGTACCGCCCTTATCTCTAATGGGACAATACATGGAGTGGTACGGAAACTGTGCGGAGTAAATGTGAAATGGCTATAGCTAGCCTACATGTCGGTGATGGGTTTAGTTGTCCAACCACAAGACATTAGTTAAATTGAAACTCAAATGTCGTGTCTACTAGTCAGCTATCTAGCTGTGTTACATAGACCTTATTCAGCATCGCTCCATTGTCCCCATACACAATAATGTGCATTTTAACTGTGTTCTGTTGATTATCTAAGTGATTTTGTGACAGCCCATAATATAAGCTGACTAATCGTTTGTTCAGCGTAGTAATAAGGAACCATATTGTTAAAATGGACATTTAAAgtaaaaacaataaaaataaggAAGTTGTACAATTTGAAACGTTAGAAGTAATATAATTTAAGACACAACCTAAAGCTAACGTCCACTATAATTATTTAACGGTTGGTTTTGAAAGACTGCGGCAGGAACATGGATATATTTTTACTTCACATTGTTACTTTGTGTATGTCGGTCATTGGTTGGCCTCAGCTGTATAGACTTATCCTGTAGATTGATTTAATTGACTTTATATTATGTCTTCCTAATGTTAAAAcaaatttgtttttaaatgtaattaaaGCGTTACAACAGTGCTATTTTCTAATGATGTTACAGAAATTGGTACCGAAACAGGGTTCCCTTATTTTACAGatgttttgttttttataaaGAGATCTTTAAAATGAATTGCAAACCTACTGTATAAATGAATGGTCAGCTCTCACTCAAATTCAAATAAATGGTTTATCATCCTAAA
>TU1780537
GCGATTTCTGAGCACTGTATTCAAattgttagctggctagctatccAAGCTAATATTTATCTAAGCAGTGTAGCTATGTACAAATGAAAATGTATAGAATATACTAACCTGATAATAGTTGTTGCCTAGGTTTTGGTACTTTTTGTAGCTAAATTAGCTGGTTAGTTTAGCTAGTTCCGTCTGGCTTCAGTTGTGTTGATTGAACGACGTAGCCAGCTAACAAGGGATTTAAAGTCGAGAGAAACAGGAAGCAGCTTTCAAAGGAGCTGCTGACTACTGGCCTTTGGACTGTGATGGAAAATCGTGatGATGAGGTGGACTTGCAGCAGAGTACGACAGGGAGTGAGGGGGGTGACTCATCAGGTGGAACCCCTCCCTCCAAACGCAAGGGCAAGTTCTCCAGCTTCGGGAATATGTTCAAGCCCTGGaagtggaggaagaagaagagcagCGAGACCTTCCTGGAAACCTCAATAGTGTTGGAGAGGAAGATCTCAGTAAGGAGACCTCGTCAGGAGCTGATTGACAGAGGATTGCTGAAAGAACTGCCGGAGAATGAGGGCAACGACGTGAACCATTCCAAAGGTCCGGTGGTGAAGAATGGCCAGCCAGTACCTGTTGACCGGGTCTCAGAGTCAGGGATCAGGGTGTCCCGGGGGGAGGCAGGCCCAGGGCTCAACCCCACCTGGCTACCCCAGGGAGAGGACCCACGGCGGGGCAGCGTCCCTTCAGACGACCCCCGGAGCAGGAGCCGGGTACCCTCTGACGCCTCGCGCTCCAACCGAGCCCCACTGGACGTAGACTCACACGCCAGGCTATCGGTCATAGATCTGGAGAGACGGAGTAGAGTGCCATCTGacgtgtcagagaggagaggagggtcacTACCGAGAGGACCTGCTCCCGAGGAGGGGAGGCAACGGAAAGAGGATAAAGAGGACAAGCGAGAGGAGAGGCGAGACgggaaagaggagaggcgagacgggaaagaggagaggcgagacgggaaagaggagaggcgagacgggaaagaggagaggcgagacgggaaagaggagaggcgagacgggaaagaggagaggcgagacgggaaagaggagaggcgagacggg

Function

NR:

description
phosphatase and actin regulator 4B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951068.1 False 5286 mRNA 0.53 15 47890580 47927015
TU1780537 True 1112 TUCP 0.54 5 47904839 47945574

Neighbor

gene id symbol gene type direction distance location
LOC110496399 NA coding downstream 82219 47807079 ~ 47808361 (-)
LOC110496398 LOC106588638 coding downstream 243169 47636521 ~ 47647411 (-)
LOC110496393 LOC106588612 coding downstream 562221 47326949 ~ 47328359 (-)
LOC118941176 NA coding downstream 598372 47258150 ~ 47292208 (-)
LOC118941174 NA coding downstream 639613 47248660 ~ 47250967 (-)
LOC110496401 LOC106588640 coding upstream 55711 47982726 ~ 47986560 (-)
LOC110496402 LOC106588641 coding upstream 74871 48001886 ~ 48022110 (-)
LOC110496403 LOC106570256 coding upstream 110843 48037858 ~ 48049720 (-)
LOC118941177 LOC106588644 coding upstream 130007 48057022 ~ 48062162 (-)
LOC110496838 LOC106570261 coding upstream 464900 48391915 ~ 48661347 (-)
G1556277 NA non-coding downstream 6142 47884074 ~ 47884438 (-)
G1556276 NA non-coding downstream 7407 47882878 ~ 47883173 (-)
G1556275 NA non-coding downstream 7845 47882499 ~ 47882735 (-)
G1556272 NA non-coding downstream 12581 47877617 ~ 47877999 (-)
G1555985 NA non-coding downstream 26003 47864220 ~ 47864577 (-)
G1556286 NA non-coding upstream 19513 47946528 ~ 47946767 (-)
G1556287 NA non-coding upstream 20018 47947033 ~ 47947234 (-)
G1556310 NA non-coding upstream 62987 47990002 ~ 47990207 (-)
G1556311 NA non-coding upstream 63938 47990953 ~ 47991203 (-)
G1556318 NA non-coding upstream 76163 48003178 ~ 48003497 (-)
G1555543 NA other downstream 344009 47543208 ~ 47546614 (-)
G1555168 NA other downstream 977665 46911977 ~ 46912915 (-)
G1554091 NA other downstream 1782478 46101248 ~ 46108102 (-)
G1553693 LOC106588587 other downstream 2087532 45788099 ~ 45803048 (-)
G1553544 NA other downstream 2222840 45667361 ~ 45667740 (-)
G1556577 NA other upstream 429598 48356613 ~ 48356847 (-)
G1558535 NA other upstream 2040881 49967896 ~ 49968608 (-)
LOC110496434 LOC106588680 other upstream 2096076 50023087 ~ 50034167 (-)
LOC110496438 LOC106588686 other upstream 2429254 50256021 ~ 50359132 (-)
G1556283 NA non-coding downstream 1123 47903449 ~ 47903716 (-)

Expression


Co-expression Network