Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110496405 |
| gene name | LOC106588646 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 48132310 ~ 48140645 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: stathmin-like |
| id | name | namespace |
|---|---|---|
| GO:0031110 | regulation of microtubule polymerization or depolymerization | biological_process |
| id | description |
|---|---|
| K04381 | STMN1; stathmin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021572283.2 | True | 1584 | mRNA | 0.44 | 5 | 48132310 | 48140645 |
48,123,000
48,124,000
48,125,000
48,126,000
48,127,000
48,128,000
48,129,000
48,130,000
48,131,000
48,132,000
48,133,000
48,133,000
48,134,000
48,135,000
48,136,000
48,137,000
48,138,000
48,139,000
48,140,000
48,141,000
48,142,000
48,143,000
NC_048582.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496404 | LOC106588645 | coding | upstream | 23293 | 48073893 ~ 48109017 (+) |
| LOC110496400 | LOC106588639 | coding | upstream | 305505 | 47800813 ~ 47826805 (+) |
| LOC110496397 | LOC106588637 | coding | upstream | 586964 | 47533777 ~ 47545346 (+) |
| LOC110496396 | LOC106588636 | coding | upstream | 598937 | 47523790 ~ 47533373 (+) |
| LOC110496395 | LOC106588635 | coding | upstream | 614624 | 47405537 ~ 47517686 (+) |
| LOC110496406 | LOC106588634 | coding | downstream | 660899 | 48801544 ~ 48802991 (+) |
| LOC110496411 | NA | coding | downstream | 695022 | 48835667 ~ 48838643 (+) |
| LOC118941233 | NA | coding | downstream | 695839 | 48836484 ~ 48836619 (+) |
| LOC118941232 | NA | coding | downstream | 696168 | 48836813 ~ 48836892 (+) |
| LOC118941231 | NA | coding | downstream | 696440 | 48837085 ~ 48837163 (+) |
| G1556127 | NA | non-coding | upstream | 19658 | 48074636 ~ 48112652 (+) |
| G1556139 | NA | non-coding | upstream | 46296 | 48085620 ~ 48086014 (+) |
| G1556098 | NA | non-coding | upstream | 96002 | 48035629 ~ 48036308 (+) |
| G1556083 | LOC106588641 | non-coding | upstream | 119092 | 48012302 ~ 48013218 (+) |
| G1556237 | NA | non-coding | downstream | 117732 | 48258377 ~ 48259787 (+) |
| G1556544 | NA | non-coding | downstream | 194614 | 48335259 ~ 48335604 (+) |
| G1556546 | NA | non-coding | downstream | 197812 | 48338457 ~ 48338697 (+) |
| G1556556 | NA | non-coding | downstream | 202665 | 48343310 ~ 48343551 (+) |
| G1556563 | NA | non-coding | downstream | 206281 | 48346926 ~ 48347164 (+) |
| G1556003 | LOC106588626 | other | upstream | 226923 | 47903849 ~ 47905387 (+) |
| G1556006 | LOC106588626 | other | upstream | 228939 | 47902855 ~ 47903371 (+) |
| G1556007 | NA | other | upstream | 230682 | 47900469 ~ 47901628 (+) |
| G1555433 | NA | other | upstream | 604271 | 47527745 ~ 47528039 (+) |
| G1557717 | NA | other | downstream | 1404904 | 49545549 ~ 49545809 (+) |
| G1557814 | NA | other | downstream | 1619783 | 49760428 ~ 49760966 (+) |
| G1558443 | NA | other | downstream | 2079109 | 50219754 ~ 50220127 (+) |
| G1559041 | thsd7a | other | downstream | 2493098 | 50633743 ~ 50635566 (+) |
| LOC110496482 | LOC106588780 | other | downstream | 3926197 | 52036488 ~ 52083470 (+) |
