Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118941242 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 48827969 ~ 48828104 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005037571.1 | True | 136 | mRNA | 0.43 | 1 | 48827969 | 48828104 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941178 | NA | coding | downstream | 72100 | 48754530 ~ 48755869 (-) |
| LOC110496839 | LOC106588648 | coding | downstream | 97492 | 48729225 ~ 48730477 (-) |
| LOC110496838 | LOC106570261 | coding | downstream | 166622 | 48391915 ~ 48661347 (-) |
| LOC118941177 | LOC106588644 | coding | downstream | 765807 | 48057022 ~ 48062162 (-) |
| LOC110496403 | LOC106570256 | coding | downstream | 778249 | 48037858 ~ 48049720 (-) |
| LOC110496408 | rb39b | coding | upstream | 1084 | 48829188 ~ 48834648 (-) |
| LOC110496409 | LOC106588651 | coding | upstream | 9309 | 48837413 ~ 48851235 (-) |
| LOC110496413 | LOC106588657 | coding | upstream | 234627 | 49062731 ~ 49117216 (-) |
| LOC110496414 | LOC106570277 | coding | upstream | 295645 | 49123749 ~ 49131358 (-) |
| LOC110496416 | LOC106588659 | coding | upstream | 302824 | 49130928 ~ 49134380 (-) |
| G1557202 | NA | non-coding | downstream | 93181 | 48734557 ~ 48734788 (-) |
| G1557188 | NA | non-coding | downstream | 112202 | 48715563 ~ 48715767 (-) |
| G1557184 | NA | non-coding | downstream | 121958 | 48705790 ~ 48706011 (-) |
| G1557178 | NA | non-coding | downstream | 129356 | 48698360 ~ 48698613 (-) |
| G1557175 | NA | non-coding | downstream | 131254 | 48696495 ~ 48696715 (-) |
| G1557360 | NA | non-coding | upstream | 201665 | 49029769 ~ 49030016 (-) |
| G1557376 | NA | non-coding | upstream | 212076 | 49040180 ~ 49040452 (-) |
| G1557879 | NA | non-coding | upstream | 256568 | 49084672 ~ 49086021 (-) |
| LOC110496415 | LOC106588660 | non-coding | upstream | 306570 | 49134674 ~ 49146147 (-) |
| G1557993 | NA | non-coding | upstream | 434553 | 49262657 ~ 49319527 (-) |
| G1556577 | NA | other | downstream | 471122 | 48356613 ~ 48356847 (-) |
| LOC110496401 | LOC106588640 | other | downstream | 844360 | 47982726 ~ 47986560 (-) |
| LOC110496837 | LOC106588626 | other | downstream | 882395 | 47890580 ~ 47945574 (-) |
| G1555543 | NA | other | downstream | 1281398 | 47543208 ~ 47546614 (-) |
| G1555168 | NA | other | downstream | 1915054 | 46911977 ~ 46912915 (-) |
| G1558535 | NA | other | upstream | 1139792 | 49967896 ~ 49968608 (-) |
| LOC110496434 | LOC106588680 | other | upstream | 1194987 | 50023087 ~ 50034167 (-) |
| LOC110496438 | LOC106588686 | other | upstream | 1528165 | 50256021 ~ 50359132 (-) |
| G1558916 | NA | other | upstream | 1608893 | 50436997 ~ 50437459 (-) |
| G1559205 | NA | other | upstream | 1794987 | 50623091 ~ 50623983 (-) |
