LOC110496840 (LOC106588661)


Basic Information

Item Value
gene id LOC110496840
gene name LOC106588661
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 49150285 ~ 49182882 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952989.1
TTGCTGCGCTGCTCTCGAGCTCTTTACCATTACGCAACCCATTAAATGCCTTCTTCATGTCGAACCAAAGAactgacgctgaaaaacatccgaGGGGCTGTGCAAAGACGGAAGAGGAGGAAGCCACGGGCTCAGAGGAGGATCTGGGTTCGTCTCGTGGCAGCGGCGTGTGTAAATGGTTCAACGTCCGGATGGGTTTCGGGTTCCTGTCGATGACCAACCGAGATGGGACACCGCTCGAGGAGACTGTTGATGTATTCGTTCATCAGAGCAAGCTGCACATGGAGGGCTTCCGTAGCCTGAAGGAGGGCGAGGCGGTGGAGTTTACCTTCAAGAAGTCGTCTAAAGGCCTAGAGTCTGTCACGGTGACGGGGCCAGGGGGAGCACAGTGTGTGGGCTGTGAGAAGACACCTAAGGGGCAACAGAAACGACGGTCCAAGGGGGACAGATGCTACAACTGTGGAGGACCTGACCACCATGCCAAAGAATGCCAGCTACCTCCTCAGCCCAAGAAGTGCCATTGCTGCCAGAGCATCAGCCACATGGTGGCCAACTGTCCAATCAAAGCACAGCAGTCCTCCCCTGGCTCTCAGGGAATAGCATCATCATTGAGGGATGAGAAAGAGGAGCAGAGCCACGCCCCCTTACTCCCCAGGGAGAGCTCTGATTGATCCATTCAAGGATTCAGCCAATCACAAGGTTTCATTGTAATGCTGCTGTTGGAACTACATCAGGCTGTCTTTATTTATCGAACGAACAGCAAGAAAATTGTACTTTTATTGATGCGATAGTTGAGATTGAGAGTTAGCTCTGTGTTTTAATGCACAGAGAGACACATCTATCCACCTTCTTTGCAACTCAAATACTTTTAGTAATtcctttttttttgtcaatgaagGTATTCGTTCTGCATTAGATAAAGAAGTGTCTTAGCTTCACACTGAAACAATCAACACTCACTGTGTTTACAAACTGCAATAAGCCTTGTATTGTCAGTTTTTACCACTGTTCCTATGTGCACTGATCATTTTATTTTCCCTGCTGCAGCTAAATCAGAGCTAGCCTACGTTGATTTTACTGGAGATGATCGTGAGTGTTTTCCCCAAAACCTTTTGTTAGAAAAGGGTAAAGAAAATACAATCATCCAAGTGAATGTACAGAAATAGATTGTTTCTTGGTCAAAAAGGAGTGTGTCTTTCTGCTTATTGAAATCTTCGTTGGGTATTATAAGTCATTGTGCATTTCTTCGACCAAGTGAATGTTTTAACCCTTTCTGCTGTATGAATGTTGGTGCACCATGGATGCCGATAGGACTGTGTACAATACAGCTTGTCATAAGTGCCATAGCCTGGCCATTTGTCTCATGGGTGGTTGGATGTTGCCTCCTCCCATGCATTTCACAAAGCTTTGACTCAAGGCTAATTGCTAGACCAGCGTTGATTGTATGACAgactgtgtctttctgtctgtcccatAGCTTTTACTTTGGATGTAGACATGGCTTTCTAACATATTCTGCATATTAGGGGTGTTCTCATACCCTGCCCAATACATTacctgtttatcattgtctcgtTGTACTTGGAAACTATTTAGAACATATTTGCTTTCTTGGATGGAGCTGAGTGTTTTTTCTTCAAGGACATATTTTCATGATTGAGTGCAATGATACAGGGACTCAAGTGTTGAATAAGATGGTTCTAAGTGTAGTCTTCATTCCTCTTTTACAGAGGTGACTGGAATACTTTGCACCACTTAAGTGGATATAGTTATcttttttatatttattatttattcattGTCTTAATTCTCTAAACCTCTAATTGATCCAGTGTTACAATTTCTAGCTCATTTCTGTTTAAACTGAAACTGGCTTTGGTTGTGGGCTCTTTAGAGCTTCATGGTCATATTTAGGGGCTTTGTTTTCAGTTGACTTTGTAATATGTTGTGCGTAAACCATTGCAGCAATACTCTGCACTAATCATGTATGGAGTATGAGTATGGGCATTTCTTAAAGATACTTAATAACTCATTGATCCTTATGATTGTAGCTAGGGTTTAGTTTCTCTGAAATCCTCATGTTGAACTCAGGGAAACCCATTTAAAGAGGAGCTACTTTGGAAGGAGGGGTAAAGTGTATTATGTGTGTACCTATAGCCTATAGGCTGGGTTGCCGGAAAACCCATGCAGAACATTGATTGCCAAAAGAGCCAAAAGGGCAATGCACTATTTACACGTTGTTATGACGTTACAGTAGTACAGCTAGCTATATTTAATGTTATATCCTAGTTTTGCTCTCTTTTTCTGATTTAATTGGTGATCAAGTTGTAAGACAGCGTAGGTATTAGAGAATAATGATATTTCCTTTGACACCCTGAGTTACTTCTCCGGTCTCTCTCTGGAAGTGGCATAAGACCAGTCTGAAGCACCAAACCATCTACCTCCCCACTTTCAGTGGTTATTGTAAATATACAGCTTCGTCACAATATTAATATAATGTTGTTTAGTCCCGTGTTTACTTTGCATGGTAGTCAGTCAGTAGTTAGAATAGAGTAGACTTGCCTCTCCATGTAGGAACTACTACAGCATTTTGATGACCAGGGTTGGACTGGCCGGTCCATTTTTAGCCCAGTGGACCTGTCTAACTTGGGCTTTTTGGGCAAAATTATCATTATCCGGTTAATAATGGGCGCCTTGAGGGAATAAATGGGCCGCTGTGGGGGTTCAAGAAAATTAATGACCTTGTCTATGACCTTTCAAGAGCTTGTGTTGATGGGTAATGTCATTTGCCATTTGATGTCACACAGTCATATGGGTTTGAGCCTAGTATTTTATCCCTTAATTTATTTAGGCTGTAAAGTCCAGACAATGGTTTtaatctttttattttatttagagtGGGTCGTGTTTTTTATATTACAATGTTCTTACTATATGAGAACAAGACAGAAATGCCTTGTCAAGAATCTATACAAGTCTACCTCAGGATGTTTTtgaaaatggacaatgacaagAGTTTTTTTTAATCAAGATGAAATTGTCCATGAATTTTGTGAGATTTTTTTgaacttttttattttatgtgAATGATTTATTTGTTTCAGTTTGCAATGCGATGTGTTCTACCTCCCACAGAAATGCTGTTGAATGATTGTTTACTGCTTTTATTTTTTGTGATTAAGCATTGTCTGCACCAATACATCACAGACATTTTTTGAATTATTCTCTGCATTgatattattttgtgtatgtATAACATGATAATACTGAACTCAAAGCAAGAGGGGTATATTACTCTGCATGTAGGTGACAACAGCGCCTCTTGAACAAATCACCTTATCTATACTTACCAGGACAGGCAAACGCCCTAACAACTTCAAGCAGCCTCAATAAACCTCTGACATCTCTGTTGTGTTTCTGCAGACGTGTGACACTAGGCCTACTTAAATACCAAAGCATCAAATATAAACATATTCAGCATAGGCTGTGGGAAAAATACCAGTATTTACTGTCAGAAACACATTTGTTCAATTTTGTGACAAATCTGCCACTGATCTTTTGATACATTGTAATGAGTTTGTGTAAGTTACGCTTTTGCATATGTTTCTTTCTTATATGAGTTGAAAGTATGGTTAAAAAATATTCTGAATCCTTCCTCACAAAATGAATACCCACCTCTTTTCCCTCATCGATTCTTTCTTGTCACTCTCTCAATTAGGCCTATATGTCAGTATTCAATGCATAGAGGtaatacacagtgccttcaggaatTATTCACATCCGTTCACCTTTTCagcattttgtgttacagcctgaatttacagCGGATTCAATGTAGATGTTGCATTactggcctacacaaaataccccataatgccaaagtggaattatgtttttagaaatgtttacaatttAATTAGAAatcaaaagctgaaatgtattgagtcaataagtattcaaaccctttctTTATGGAAAGcataaatatgttcaggagt
>XM_021572857.2
CTAGGTGGTCCTCGCCGCTGATTGGTCGCTCGGCGAATTTGGGCCCTATCACCGTGGAATGTCTAATTTATCAGCCAGAAGATTGCAATTGAGCATCACGTGGTGGCCTGGATCGAAAAGGTGGGGGTTAATATTAGAGGTATAGGAGGGTCAGAGTGGGCTCCCTTCCATATTGTGCAAGAGACCAGGAGAAGGAAAATACACTATTTTCCATAGAGGGATTACCGAAAAACGTGCACGGATGTTGACGATACAACCAGAGTTTATTGCCTGATTCTTCTGGAGTTGTAGGAGGGCCAGGAACCCCCCAAACCATGGCAGAAGGGGGCTGTGCAAAGACGGAAGAGGAGGAAGCCACGGGCTCAGAGGAGGATCTGGGTTCGTCTCGTGGCAGCGGCGTGTGTAAATGGTTCAACGTCCGGATGGGTTTCGGGTTCCTGTCGATGACCAACCGAGATGGGACACCGCTCGAGGAGACTGTTGATGTATTCGTTCATCAGAGCAAGCTGCACATGGAGGGCTTCCGTAGCCTGAAGGAGGGCGAGGCGGTGGAGTTTACCTTCAAGAAGTCGTCTAAAGGCCTAGAGTCTGTCACGGTGACGGGGCCAGGGGGAGCACAGTGTGTGGGCTGTGAGAAGACACCTAAGGGGCAACAGAAACGACGGTCCAAGGGGGACAGATGCTACAACTGTGGAGGACCTGACCACCATGCCAAAGAATGCCAGCTACCTCCTCAGCCCAAGAAGTGCCATTGCTGCCAGAGCATCAGCCACATGGTGGCCAACTGTCCAATCAAAGCACAGCAGTCCTCCCCTGGCTCTCAGGGAATAGCATCATCATTGAGGGATGAGAAAGAGGAGCAGAGCCACGCCCCCTTACTCCCCAGGGAGAGCTCTGATTGATCCATTCAAGGATTCAGCCAATCACAAGGTTTCATTGTAATGCTGCTGTTGGAACTACATCAGGCTGTCTTTATTTATCGAACGAACAGCAAGAAAATTGTACTTTTATTGATGCGATAGTTGAGATTGAGAGTTAGCTCTGTGTTTTAATGCACAGAGAGACACATCTATCCACCTTCTTTGCAACTCAAATACTTTTAGTAATtcctttttttttgtcaatgaagGTATTCGTTCTGCATTAGATAAAGAAGTGTCTTAGCTTCACACTGAAACAATCAACACTCACTGTGTTTACAAACTGCAATAAGCCTTGTATTGTCAGTTTTTACCACTGTTCCTATGTGCACTGATCATTTTATTTTCCCTGCTGCAGCTAAATCAGAGCTAGCCTACGTTGATTTTACTGGAGATGATCGTGAGTGTTTTCCCCAAAACCTTTTGTTAGAAAAGGGTAAAGAAAATACAATCATCCAAGTGAATGTACAGAAATAGATTGTTTCTTGGTCAAAAAGGAGTGTGTCTTTCTGCTTATTGAAATCTTCGTTGGGTATTATAAGTCATTGTGCATTTCTTCGACCAAGTGAATGTTTTAACCCTTTCTGCTGTATGAATGTTGGTGCACCATGGATGCCGATAGGACTGTGTACAATACAGCTTGTCATAAGTGCCATAGCCTGGCCATTTGTCTCATGGGTGGTTGGATGTTGCCTCCTCCCATGCATTTCACAAAGCTTTGACTCAAGGCTAATTGCTAGACCAGCGTTGATTGTATGACAgactgtgtctttctgtctgtcccatAGCTTTTACTTTGGATGTAGACATGGCTTTCTAACATATTCTGCATATTAGGGGTGTTCTCATACCCTGCCCAATACATTacctgtttatcattgtctcgtTGTACTTGGAAACTATTTAGAACATATTTGCTTTCTTGGATGGAGCTGAGTGTTTTTTCTTCAAGGACATATTTTCATGATTGAGTGCAATGATACAGGGACTCAAGTGTTGAATAAGATGGTTCTAAGTGTAGTCTTCATTCCTCTTTTACAGAGGTGACTGGAATACTTTGCACCACTTAAGTGGATATAGTTATcttttttatatttattatttattcattGTCTTAATTCTCTAAACCTCTAATTGATCCAGTGTTACAATTTCTAGCTCATTTCTGTTTAAACTGAAACTGGCTTTGGTTGTGGGCTCTTTAGAGCTTCATGGTCATATTTAGGGGCTTTGTTTTCAGTTGACTTTGTAATATGTTGTGCGTAAACCATTGCAGCAATACTCTGCACTAATCATGTATGGAGTATGAGTATGGGCATTTCTTAAAGATACTTAATAACTCATTGATCCTTATGATTGTAGCTAGGGTTTAGTTTCTCTGAAATCCTCATGTTGAACTCAGGGAAACCCATTTAAAGAGGAGCTACTTTGGAAGGAGGGGTAAAGTGTATTATGTGTGTACCTATAGCCTATAGGCTGGGTTGCCGGAAAACCCATGCAGAACATTGATTGCCAAAAGAGCCAAAAGGGCAATGCACTATTTACACGTTGTTATGACGTTACAGTAGTACAGCTAGCTATATTTAATGTTATATCCTAGTTTTGCTCTCTTTTTCTGATTTAATTGGTGATCAAGTTGTAAGACAGCGTAGGTATTAGAGAATAATGATATTTCCTTTGACACCCTGAGTTACTTCTCCGGTCTCTCTCTGGAAGTGGCATAAGACCAGTCTGAAGCACCAAACCATCTACCTCCCCACTTTCAGTGGTTATTGTAAATATACAGCTTCGTCACAATATTAATATAATGTTGTTTAGTCCCGTGTTTACTTTGCATGGTAGTCAGTCAGTAGTTAGAATAGAGTAGACTTGCCTCTCCATGTAGGAACTACTACAGCATTTTGATGACCAGGGTTGGACTGGCCGGTCCATTTTTAGCCCAGTGGACCTGTCTAACTTGGGCTTTTTGGGCAAAATTATCATTATCCGGTTAATAATGGGCGCCTTGAGGGAATAAATGGGCCGCTGTGGGGGTTCAAGAAAATTAATGACCTTGTCTATGACCTTTCAAGAGCTTGTGTTGATGGGTAATGTCATTTGCCATTTGATGTCACACAGTCATATGGGTTTGAGCCTAGTATTTTATCCCTTAATTTATTTAGGCTGTAAAGTCCAGACAATGGTTTtaatctttttattttatttagagtGGGTCGTGTTTTTTATATTACAATGTTCTTACTATATGAGAACAAGACAGAAATGCCTTGTCAAGAATCTATACAAGTCTACCTCAGGATGTTTTtgaaaatggacaatgacaagAGTTTTTTTTAATCAAGATGAAATTGTCCATGAATTTTGTGAGATTTTTTTgaacttttttattttatgtgAATGATTTATTTGTTTCAGTTTGCAATGCGATGTGTTCTACCTCCCACAGAAATGCTGTTGAATGATTGTTTACTGCTTTTATTTTTTGTGATTAAGCATTGTCTGCACCAATACATCACAGACATTTTTTGAATTATTCTCTGCATTgatattattttgtgtatgtATAACATGATAATACTGAACTCAAAGCAAGAGGGGTATATTACTCTGCATGTAGGTGACAACAGCGCCTCTTGAACAAATCACCTTATCTATACTTACCAGGACAGGCAAACGCCCTAACAACTTCAAGCAGCCTCAATAAACCTCTGACATCTCTGTTGTGTTTCTGCAGACGTGTGACACTAGGCCTACTTAAATACCAAAGCATCAAATATAAACATATTCAGCATAGGCTGTGGGAAAAATACCAGTATTTACTGTCAGAAACACATTTGTTCAATTTTGTGACAAATCTGCCACTGATCTTTTGATACATTGTAATGAGTTTGTGTAAGTTACGCTTTTGCATATGTTTCTTTCTTATATGAGTTGAAAGTATGGTTAAAAAATATTCTGAATCCTTCCTCACAAAATGAATACCCACCTCTTTTCCCTCATCGATTCTTTCTTGTCACTCTCTCAATTAGGCCTATATGTCAGTATTCAATGCATAGAGGtaatacacagtgccttcaggaatTATTCACATCCGTTCACCTTTTCagcattttgtgttacagcctgaatttacagCGGATTCAATGTAGATGTTGCATTactggcctacacaaaataccccataatgccaaagtggaattatgtttttagaaatgtttacaatttAATTAGAAatcaaaagctgaaatgtattgagtcaataagtattcaaaccctttctTTATGGAAAGcataaatatgttcaggagt
>XM_036952990.1
CATGGCCTCACTGCGGTGTCGACGTATCCCGGCCCGGCGCTGGGCACAAACAGCAGGTTATTACCGTCACAGAAGTCCTTGACCGCCTTCCAGTTCTGGTGAGAGGAGCCGAAGGAGAAGCCGTTGGAGGCGAAGGGGCTGTGCAAAGACGGAAGAGGAGGAAGCCACGGGCTCAGAGGAGGATCTGGGTTCGTCTCGTGGCAGCGGCGTGTGTAAATGGTTCAACGTCCGGATGGGTTTCGGGTTCCTGTCGATGACCAACCGAGATGGGACACCGCTCGAGGAGACTGTTGATGTATTCGTTCATCAGAGCAAGCTGCACATGGAGGGCTTCCGTAGCCTGAAGGAGGGCGAGGCGGTGGAGTTTACCTTCAAGAAGTCGTCTAAAGGCCTAGAGTCTGTCACGGTGACGGGGCCAGGGGGAGCACAGTGTGTGGGCTGTGAGAAGACACCTAAGGGGCAACAGAAACGACGGTCCAAGGGGGACAGATGCTACAACTGTGGAGGACCTGACCACCATGCCAAAGAATGCCAGCTACCTCCTCAGCCCAAGAAGTGCCATTGCTGCCAGAGCATCAGCCACATGGTGGCCAACTGTCCAATCAAAGCACAGCAGTCCTCCCCTGGCTCTCAGGGAATAGCATCATCATTGAGGGATGAGAAAGAGGAGCAGAGCCACGCCCCCTTACTCCCCAGGGAGAGCTCTGATTGATCCATTCAAGGATTCAGCCAATCACAAGGTTTCATTGTAATGCTGCTGTTGGAACTACATCAGGCTGTCTTTATTTATCGAACGAACAGCAAGAAAATTGTACTTTTATTGATGCGATAGTTGAGATTGAGAGTTAGCTCTGTGTTTTAATGCACAGAGAGACACATCTATCCACCTTCTTTGCAACTCAAATACTTTTAGTAATtcctttttttttgtcaatgaagGTATTCGTTCTGCATTAGATAAAGAAGTGTCTTAGCTTCACACTGAAACAATCAACACTCACTGTGTTTACAAACTGCAATAAGCCTTGTATTGTCAGTTTTTACCACTGTTCCTATGTGCACTGATCATTTTATTTTCCCTGCTGCAGCTAAATCAGAGCTAGCCTACGTTGATTTTACTGGAGATGATCGTGAGTGTTTTCCCCAAAACCTTTTGTTAGAAAAGGGTAAAGAAAATACAATCATCCAAGTGAATGTACAGAAATAGATTGTTTCTTGGTCAAAAAGGAGTGTGTCTTTCTGCTTATTGAAATCTTCGTTGGGTATTATAAGTCATTGTGCATTTCTTCGACCAAGTGAATGTTTTAACCCTTTCTGCTGTATGAATGTTGGTGCACCATGGATGCCGATAGGACTGTGTACAATACAGCTTGTCATAAGTGCCATAGCCTGGCCATTTGTCTCATGGGTGGTTGGATGTTGCCTCCTCCCATGCATTTCACAAAGCTTTGACTCAAGGCTAATTGCTAGACCAGCGTTGATTGTATGACAgactgtgtctttctgtctgtcccatAGCTTTTACTTTGGATGTAGACATGGCTTTCTAACATATTCTGCATATTAGGGGTGTTCTCATACCCTGCCCAATACATTacctgtttatcattgtctcgtTGTACTTGGAAACTATTTAGAACATATTTGCTTTCTTGGATGGAGCTGAGTGTTTTTTCTTCAAGGACATATTTTCATGATTGAGTGCAATGATACAGGGACTCAAGTGTTGAATAAGATGGTTCTAAGTGTAGTCTTCATTCCTCTTTTACAGAGGTGACTGGAATACTTTGCACCACTTAAGTGGATATAGTTATcttttttatatttattatttattcattGTCTTAATTCTCTAAACCTCTAATTGATCCAGTGTTACAATTTCTAGCTCATTTCTGTTTAAACTGAAACTGGCTTTGGTTGTGGGCTCTTTAGAGCTTCATGGTCATATTTAGGGGCTTTGTTTTCAGTTGACTTTGTAATATGTTGTGCGTAAACCATTGCAGCAATACTCTGCACTAATCATGTATGGAGTATGAGTATGGGCATTTCTTAAAGATACTTAATAACTCATTGATCCTTATGATTGTAGCTAGGGTTTAGTTTCTCTGAAATCCTCATGTTGAACTCAGGGAAACCCATTTAAAGAGGAGCTACTTTGGAAGGAGGGGTAAAGTGTATTATGTGTGTACCTATAGCCTATAGGCTGGGTTGCCGGAAAACCCATGCAGAACATTGATTGCCAAAAGAGCCAAAAGGGCAATGCACTATTTACACGTTGTTATGACGTTACAGTAGTACAGCTAGCTATATTTAATGTTATATCCTAGTTTTGCTCTCTTTTTCTGATTTAATTGGTGATCAAGTTGTAAGACAGCGTAGGTATTAGAGAATAATGATATTTCCTTTGACACCCTGAGTTACTTCTCCGGTCTCTCTCTGGAAGTGGCATAAGACCAGTCTGAAGCACCAAACCATCTACCTCCCCACTTTCAGTGGTTATTGTAAATATACAGCTTCGTCACAATATTAATATAATGTTGTTTAGTCCCGTGTTTACTTTGCATGGTAGTCAGTCAGTAGTTAGAATAGAGTAGACTTGCCTCTCCATGTAGGAACTACTACAGCATTTTGATGACCAGGGTTGGACTGGCCGGTCCATTTTTAGCCCAGTGGACCTGTCTAACTTGGGCTTTTTGGGCAAAATTATCATTATCCGGTTAATAATGGGCGCCTTGAGGGAATAAATGGGCCGCTGTGGGGGTTCAAGAAAATTAATGACCTTGTCTATGACCTTTCAAGAGCTTGTGTTGATGGGTAATGTCATTTGCCATTTGATGTCACACAGTCATATGGGTTTGAGCCTAGTATTTTATCCCTTAATTTATTTAGGCTGTAAAGTCCAGACAATGGTTTtaatctttttattttatttagagtGGGTCGTGTTTTTTATATTACAATGTTCTTACTATATGAGAACAAGACAGAAATGCCTTGTCAAGAATCTATACAAGTCTACCTCAGGATGTTTTtgaaaatggacaatgacaagAGTTTTTTTTAATCAAGATGAAATTGTCCATGAATTTTGTGAGATTTTTTTgaacttttttattttatgtgAATGATTTATTTGTTTCAGTTTGCAATGCGATGTGTTCTACCTCCCACAGAAATGCTGTTGAATGATTGTTTACTGCTTTTATTTTTTGTGATTAAGCATTGTCTGCACCAATACATCACAGACATTTTTTGAATTATTCTCTGCATTgatattattttgtgtatgtATAACATGATAATACTGAACTCAAAGCAAGAGGGGTATATTACTCTGCATGTAGGTGACAACAGCGCCTCTTGAACAAATCACCTTATCTATACTTACCAGGACAGGCAAACGCCCTAACAACTTCAAGCAGCCTCAATAAACCTCTGACATCTCTGTTGTGTTTCTGCAGACGTGTGACACTAGGCCTACTTAAATACCAAAGCATCAAATATAAACATATTCAGCATAGGCTGTGGGAAAAATACCAGTATTTACTGTCAGAAACACATTTGTTCAATTTTGTGACAAATCTGCCACTGATCTTTTGATACATTGTAATGAGTTTGTGTAAGTTACGCTTTTGCATATGTTTCTTTCTTATATGAGTTGAAAGTATGGTTAAAAAATATTCTGAATCCTTCCTCACAAAATGAATACCCACCTCTTTTCCCTCATCGATTCTTTCTTGTCACTCTCTCAATTAGGCCTATATGTCAGTATTCAATGCATAGAGGtaatacacagtgccttcaggaatTATTCACATCCGTTCACCTTTTCagcattttgtgttacagcctgaatttacagCGGATTCAATGTAGATGTTGCATTactggcctacacaaaataccccataatgccaaagtggaattatgtttttagaaatgtttacaatttAATTAGAAatcaaaagctgaaatgtattgagtcaataagtattcaaaccctttctTTATGGAAAGcataaatatgttcaggagt

Function

NR:

description
protein lin-28 homolog A-like

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0019827 stem cell population maintenance biological_process
GO:0031054 pre-miRNA processing biological_process
GO:0031099 regeneration biological_process
GO:0031123 RNA 3'-end processing biological_process
GO:0010587 miRNA catabolic process biological_process
GO:0000932 P-body cellular_component
GO:0005634 nucleus cellular_component
GO:0010494 cytoplasmic stress granule cellular_component
GO:0003677 DNA binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K09250 CNBP; cellular nucleic acid-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952989.1 False 3998 mRNA 0.40 4 49150285 49165567
XM_021572857.2 False 4229 mRNA 0.41 4 49150285 49167001
XM_036952990.1 True 4039 mRNA 0.40 4 49150285 49182882

Neighbor

gene id symbol gene type direction distance location
LOC110496415 LOC106588660 coding downstream 4138 49134674 ~ 49146147 (-)
LOC110496416 LOC106588659 coding downstream 15905 49130928 ~ 49134380 (-)
LOC110496414 LOC106570277 coding downstream 18927 49123749 ~ 49131358 (-)
LOC110496413 LOC106588657 coding downstream 33069 49062731 ~ 49117216 (-)
LOC110496409 LOC106588651 coding downstream 299050 48837413 ~ 48851235 (-)
LOC110496418 LOC106588662 coding upstream 3790 49186672 ~ 49200574 (-)
LOC110496422 LOC106588665 coding upstream 18344 49201226 ~ 49203888 (-)
LOC110496421 LOC106588664 coding upstream 21103 49203985 ~ 49209483 (-)
LOC110496424 LOC106588667 coding upstream 112690 49295572 ~ 49297343 (-)
LOC100135978 LOC106588669 coding upstream 149799 49332681 ~ 49473129 (-)
G1557879 NA non-coding downstream 64264 49084672 ~ 49086021 (-)
G1557376 NA non-coding downstream 109833 49040180 ~ 49040452 (-)
G1557360 NA non-coding downstream 120269 49029769 ~ 49030016 (-)
G1557202 NA non-coding downstream 415497 48734557 ~ 48734788 (-)
G1557993 NA non-coding upstream 79775 49262657 ~ 49319527 (-)
G1558076 NA non-coding upstream 294470 49477352 ~ 49477569 (-)
G1558118 LOC106582599 non-coding upstream 361431 49544313 ~ 49544584 (-)
G1558134 NA non-coding upstream 398092 49580974 ~ 49581482 (-)
G1558139 NA non-coding upstream 403461 49586343 ~ 49586880 (-)
G1556577 NA other downstream 793438 48356613 ~ 48356847 (-)
LOC110496401 LOC106588640 other downstream 1166676 47982726 ~ 47986560 (-)
LOC110496837 LOC106588626 other downstream 1204711 47890580 ~ 47945574 (-)
G1555543 NA other downstream 1603714 47543208 ~ 47546614 (-)
G1555168 NA other downstream 2237370 46911977 ~ 46912915 (-)
G1558535 NA other upstream 785014 49967896 ~ 49968608 (-)
LOC110496434 LOC106588680 other upstream 840209 50023087 ~ 50034167 (-)
LOC110496438 LOC106588686 other upstream 1173387 50256021 ~ 50359132 (-)
G1558916 NA other upstream 1254115 50436997 ~ 50437459 (-)
G1559205 NA other upstream 1440209 50623091 ~ 50623983 (-)

Expression


Co-expression Network