trak1b (LOC106588779)


Basic Information

Item Value
gene id trak1b
gene name LOC106588779
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 52179320 ~ 52240648 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953075.1
GCTGGCCTCCCCAGCCCCCGCCCTGCCCCCGGACCCAGAGCCAGAGCCCGGCCCGGCCAGCCGAGAGGAGGAGCAGTATGTGAGCCTGCCTGAGCcacccaccccaccaccaccatgcagGGACGCTGAGACCCTCactgaTGTGTGTAACGCTGCTGACCTGCCGGAAGTTGAGATCATCAGTCTGTTGGAGGAGCAGCTGCCGGTGTATCGGTTACGTGCCGACACCGTCTTCGGTTACGACCATGACGACTGGCTACACACACCGCTACTGTCACCAGACGCACGCATCGACCTGACCACAGAACAGATCGAGGAGACGCTCAAATACTTctTGCTATGTGCAGACAGAGTGGGCCAGATGACGAAGACCTACAATGACATCGATGCTGTCACACGTCtgctggaggagaaagagagggacctGGAGTTGGCTGCTCGGATCGGCCAATCACTGCTCAAGAAGAACAGAACGCTCACAGAGCAGAATGACTACCTGGAGGTACAAGTGGGACACATCacagaggagGTGGCCCAGCTGCATCATGAGTTGAACCTGAAGGATGAGTTGCTGCAGTTCTACACCAATGCAtcagaggagagtgaagaggacTCTACTACTGGCTCACCCACgAGTAAGCGGAGTAAGCTGCTGGGTGTGTCAGGATTTGGAGCTGACTCTATGCAGAGGAAACTCAGAGAGCTGGAGGAAGAGAACCTATCCCTCCGCTCAGAGGCCTGTAATCTGAAGACTGAGACTGAGACCTACGAGGAGAAGGAACAACAGCTGGTCAACGACTGTGTTAAAGAACTCAgacagtccagtctgcAGATAAACACCATAGCGGAGGAGTTGGCTCGGAAGACAGAGGACGCCATGCGACAGCAGGAGGAGATCACACACCTGCTCTCTCAAATAGTTGACCTACAGAAGAAAGCCAAGTCGtACGCAGTGGAAAATGAGGAGCTCTCTCAGCACCTAGGGGCAGCTAAAGATGCCCAGAGACAACTCACAGTCGAGCTAACAGATTTGGATGATAAATATTCAGAGTGTATAGAGATGCTCCATGAGGCTCAGGAAGAGCTGAAGTCCTTGAGGAACAGAAACCATCCTGCTGGAACACCACGCAGATTCCATCCTCTGGGTCTCTACCCTATGGACTCCCTGGCAGCAGAGATAGAGGGGACGATGAGGAAGGAGATGAGTCTGGATGACCCTGAGTGCGAGGAACAGAAGGTGCACCACAAGCGTGTGTTTGAGACAGTGAAGAACATCAACCAGATGGTCCGACAGCGTTCTCCAATCCCGTCCAACGCCAACATCCCGGGATCCAATCAGGCGTCGTCTCTTAGCTCCGCTCACTCTAGTGGCAGGACCACACCCATGGCTGGTAGCATTAGCTGGGATGTCAGAGGTGACGGTGTCGCCCTTGACAACCGACAACAGAGCATGCTCATGGAGTCAGCAGCAGACAATCAGGACAGTGTGGACGCCCGTGCTAAGAAAGCAGCTGGTGTTGAGGACCTGAGGCTGGCATTACGCCGCCTGTCCCTGCGCCGCCAGAACAACCTGAGCGAGAGACGCTTctttgaggaggagagagggaggaggagaggtggaggaggagttgCGCAGGATGGGGGGGGGCAGGGGGGCGGGATGACCCCCTCAGATAGCATCATGTCTCTGGGGTCATTACACCTGTGGGCCTCCCGACCATACCTCCCCGACAAACTACAGATTGTTAAACCCCTGGAagGCTCTGCGACCCTTCACCACTGGCAGCAGTTGGCTCAGCCCCACTTAGGAGTGATCCTGGATGCTAGACCTGGGGTTGTACCTAAAGGCTTCAGGCCTCTGGAACTAGAGCTGGAacagGTGTATCCATGGGGTGGTTTCGAGGAGGATGAACCAGGAGAGCAGTACTTCCAGAGTCTCCCCACCTCCTCAGCCTCTGCCTCCCCCGCCCTCCCCCCTCAGCCTCACCCTCCTTACCCCTCTGCCCCCCCCAGCCACCTCGCCTCACCCtcaaccccctctccctcccctcacctAAGCAACACTGATCCTGCAGCGGTGTACTACCCAGGTAAATGCATGGCCCATACCAGCTCTACCTACACCTTTACTACCTGTCGTATCCTACACCCAACTGATGAGCTGACCCGAGTCACACCCAGtGTTAACCCCGGCATGTCCTCGTCATCCTGTGTGATGACATCATCTATCCTGGCCACTCCCGCTGCCACGCCCTGTCATACACCCCGCAGGATGAGTCTACTACGACCCTCTGAGTCCTCTACCAacctcagGGAAGCCACACGTACCACCAGTACCTCTCTGGGATTAGTGCGCCTTCTGCAGGAGAGAGGTATCTCTGCAGCCATGTACCACCACCAGACCCAGGGCTGGGACAGGGCTGGCGGGACCGGGGTGGGGAGCGGAGGGGTGCTGTTCAGTACCTCTATCACCCCTAACCTCCACCCAGCCCCCCACCCCGACTCCCTCCGCCCCTCCACTCCCCCCAACTCCCCCACAGGACACGACCCCCCATCCTCGGGGACCAACACCCCCGCGGGCTTCGACTTCAAGTCTCCTTCCTATGACAACTTCCTGGCCTCCAAGCCGGCACGGTCCATTCTGAAGGAAGTAGCGGGGGGGATGGGAAGCAGCCGGAGCAGGAGGcagcagagggggagagattgTGAGAGCCAGACAGATGTTAGCGTCACAGTTCATAACCTCAACCTGGTGGACAAGGTGAGGCGCCTGGGTGTGGCTGGGTGTCCTCCAGGACCAGGGGGTGTAACCGGGGGACCAAGCCCCCTCCTGGGGCCTCTGGGTGGGCTACGGAGGCCCGGGTCGCCCTTTGGACCAGAGGGGATGAGGAGGAACAGGAGTTATCCAGCTATGGTAGGGGCCAGTATGGCGATGAAGGGCCCGGGGCCCCAGGAGGACTCAGAACTACTCCTGCCTCCTAACAAAATGCCTAAAGAGAAGAGCCTCAAGTAGAGGCTGGGACCTCTGGCCTCTAACCGCTGACCCCTAATATTAACCCTAACCAACTAGTTTCCTCTGGAGACTGAACTTGTTACTTACCTGTTAGACCTCTGGTACTATAGCTAGTTTTTCAAAATCCTACAAACTATTGGTACTCCTGGTCTAGCTATTGACAAATGACAACCAGTCACCTTTCTCAGCTACTGACAATTAATTAGTCTTCTAGTTCTATCCGATGCTTATCCTTCCAGCTCCAAAACCAAATGGCTGCCCAGCTGTCTGCTGTTGTTTAACCAGCTACCAAACTAGTACTAACAATGAACAATGATCTTCCATAATAGTTAAAACTTTAAAACTTTTCCTATCTAGCCCTTGAACACAGCTATTTCTCCCTGATGTAGTCAATGAAATGACATTGAACTAATGTGGAATTGACATTGAATTGATGTCTGCGCCCAGAGGGGGGTAAGCTCCTCACATGTAGACTAAGCGTAATGTATGTAgttcaaatctaattgtatttgtcacatgctttgtaaacaacaggtgtagactaacagtaaaagtCTTACTaaagggcccttcccaacaatgcagagagaaaacaaGTCATAATAACATAAGGAATAAatgcacaatgagtaacgataacttggctacatacacggggtaccagtactgagtggatgtgcaggggtacgaggtaactgagatagatatgtacatataggtagggataaagtgactaggaaaCGAAATAACAAAtaatagcagcagtgtatgtgacgAGTCAAAAGAGTTCATgcaaaagggtcaatgcagatagtctgggcagctattggttaactatttaactacctATTcaccagtcttatggcttgggggtagaatctgttcaggATCCTGTTGGTTTCAGACTTGGTGTATTGCTACCCCTTACCATGCGctagcagagacaacagtctatgacttgggtagctggagtctttgacaatttgctGAGAAAGTTAGATCAAACTTACACGTCATGTGATTGTCATGTCAGCTGGACTTGGAGCTTCTTCCTGACCATGTATTTAGATTACTAGTATCATGTAGCACCACTAACTATAGTCTAAACCTTTCTTCCTAGGTAATAATGGATTGGGAGGTAATGTTGAATATGTACCAATTCTAATGGTAAAGGTTTTCCACCAAATTCATGAAATAGATGATCAACTTTTTTGCtcaactctttctctttctttctttttctcttccactctctctttctctctccctgttctcaaTGAGACGAATAAGTCATAGTTCACTTTTAAGAGTCTTGTTAATGTTTTGTCTGTGTGTTAAAGTTTCATTAGTGTTATTTTTCTAAATGACTATAGACAAAGGGAAATGGATAGTGGTTTCAGAGTGGTCAGTGAGTGAGGGAATTATGAAAAGATCAATATACCCACTGCTGGAATGGAGACAGGGAAGGAGGAAccggaggaagggatagaggttAAACAGTCTTTGTGGTCAGAAGCGTTTCCTGCTTCTTACTTCAGAGAACTCCACAGAGAATTTCAATTgcttaaattaataaaaaaagcATTAGTGCCTCAATATGGTTTCTACATCACTATGCTCATACTGGTTGTTTATGTTCTTATTCTAACAAAAAAGTTGTCCACTGAGTTACACTCGTTAGCTCTTACATTGATATGTATAATTATGTAATTTATTGACTTTCGATTGAATATGCAAAACTATTATTATTCACAAGATTTAACACATAAAACACATGCGGTATATAACACTATATTCATTCATTGTTATTAGTACTGGAAAACTCATTTACAACAATCACGGTGAaatagagtggtggtgttcaatactaaacaaaaatataaacgcaacatgtaaagtgttggtttcatgagctgaaataaaatataccaGAAATTGTCCacaa
>TU1786042
atacatgacgGAAATAACAAAtaatagcagcagtgtatgtgacgAGTCAAAAGAGTTCATgcaaaagggtcaatgcagatagtctgggcagctattggttaactatttaactacctATTcaccagtcttatggcttgggggtagaatctgttcaggATCCTGTTGGTTTCAGACTTGGTGTATTGCTACCCCTTACCATGCGctagcagagacaacagtctatgacttgggtagctggagtctttgacaatttgctGAGAAAGTTAGATCAAACTTACACGTCATGTGATTGTCATGTCAGCTGGACTTGGAGCTTCTTCCTGACCATGTATTTAGATTACTAGTATCATGTAGCACCACTAACTATAGTCTAAACCTTTCTTCCTAGGTAATAATGGATTGGGAGGTAATGTTGAATATGTACCAATTCTAATGGTAAAGGTTTTCCACCAAATTCATGAAATAGATGATCAACTTTTTTGCtcaactctttctctttctttctttttctcttccactctctctttctctctccctgttctcaaTGAGACGAATAAGTCATAGTTCACTTTTAAGAGTCTTGTTAATGTTTTGTCTGTGTGTTAAAGTTTCATTAGTGTTATTTTTCTAAATGACTATAGACAAAGGGAAATGGATAGTGGTTTCAGAGTGGTCAGTGAGTGAGGGAATTATGAAAAGATCAATATACCCACTGCTGGAATGGAGACAGGGAAGGAGGAAccggaggaagggatagaggttAAACAGTCTTTGTGGTCAGAAGCGTTTCCTGCTTCTTACTTCAGAGAACTCCACAGAGAATTTCAATTgcttaaattaataaaaaaagcATTAGTGCCTCAATATGGTTTCTACATCACTATGCTCATACTGGTTGTTTATGTTCTTATTCTAACAAAAAAGTTGTCCACTGAGTTACACTCGTTAGCTCTTACATTGATATGTATAATTATGTAATTTATTGACTTTCGATTGAATATGCAAAACTATTATTATTCACAAGATTTAACACATAAAACACATGCGGTATATAACACTATATTCATTCATTGTTATTAGTACTGGAAAACTCATTTACAACAATCACGGTGAaatagagtggtggtgttcaatactaaacaaaaatataaacgcaacatgtaaagtgttggtttcatgagctgaaataaaatataccaGAAATTGTCCacaa
>TU1786046
CCTCGCCTCACCCtcaaccccctctccctcccctcacctAAGCAACACTGATCCTGCAGCGGTGTACTACCCAGGTAAATGCATGGCCCATACCAGCTCTACCTACACCTTTACTACCTGTCGTATCCTACACCCAACTGATGAGCTGACCCGAGTCACACCCAGtGTTAACCCCGGCATGTCCTCGTCATCCTGTGTGATGACATCATCTATCCTGGCCACTCCCGCTGCCACGCCCTGTCATACACCCCGCAGGATGAGTCTACTACGACCCTCTGAGTCCTCTACCAacctcagGGAAGCCACACGTACCACCAGTACCTCTCTGGGATTAGTGCGCCTTCTGCAGGAGAGAGGTATCTCTGCAGCCATGTACCACCACCAGACCCAGGGCTGGGACAGGGCTGgtagggataaagtgactaggaaaCGAAATAACAAAtaatagcagcagtgtatgtgacgAGTCAAAAGAGTTCATgcaaaagggtcaatgcagatagtctgggcagctattggttaactatttaactacctATTcaccagtcttatggcttgggggtagaatctgttcaggATCCTGTTGGTTTCAGACTTGGTGTATTGCTACCCCTTACCATGCGctagcagagacaacagtctatgacttgggtagctggagtctttgacaatttgctGAGAAAGTTAGATCAAACTTACACGTCATGTGATTGTCATGTCAGCTGGACTTGGAGCTTCTTCCTGACCATGTATTTAGATTACTAGTATCATGTAGCACCACTAACTATAGTCTAAACCTTTCTTCCTAGGTAATAATGGATTGGGAGGTAATGTTGAATATGTACCAATTCTAATGGTAAAGGTTTTCCACCAAATTCATGAAATAGATGATCAACTTTTTTGCtcaactctttctctttctttctttttctcttccactctctctttctctctccctgttctcaaTGAGACGAATAAGTCATAGTTCACTTTTAAGAGTCTTGTTAATGTTTTGTCTGTGTGTTAAAGTTTCATTAGTGTTATTTTTCTAAATGACTATAGACAAAGGGAAATGGATAGTGGTTTCAGAGTGGTCAGTGAGTGAGGGAATTATGAAAAGATCAATATACCCACTGCTGGAATGGAGACAGGGAAGGAGGAAccggaggaagggatagaggttAAACAGTCTTTGTGGTCAGAAGCGTTTCCTGCTTCTTACTTCAGAGAACTCCACAGAGAATTTCAATTgcttaaattaataaaaaaagcATTAGTGCCTCAATATGGTTTCTACATCACTATGCTCATACTGGTTGTTTATGTTCTTATTCTAACAAAAAAGTTGTCCACTGAGTTACACTCGTTAGCTCTTACATTGATATGTATAATTATGTAATTTATTGACTTTCGATTGAATATGCAAAACTATTATTATTCACAAGATTTAACACATAAAACACATGCGGTATATAACACTATATTCATTCATTGTTATTAGTACTGGAAAACTCATTTACAACAATCACGGTGAaatagagtggtggtgttcaatactaaacaaaaatataaacgcaacatgtaaagtgttggtttcatgagctgaaataaaatataccaGAAATTGTCCacaa

Function

NR:

description
trafficking kinesin-binding protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953075.1 False 4958 mRNA 0.50 16 52179320 52219848
TU1786042 False 1213 lncRNA 0.36 2 52179320 52240648
TU1786046 True 1634 TUCP 0.41 5 52179320 52183207

Neighbor

gene id symbol gene type direction distance location
LOC110496470 LOC106588694 coding downstream 675526 51486612 ~ 51503794 (-)
LOC110496466 LOC106588698 coding downstream 749944 51426740 ~ 51429376 (-)
LOC110496464 LOC106588701 coding downstream 944392 51230478 ~ 51234928 (-)
LOC110496463 LOC106588703 coding downstream 964922 51213151 ~ 51214398 (-)
LOC110496461 lpcat1 coding downstream 974088 51168766 ~ 51205232 (-)
zgc:110239 LOC100846955 coding upstream 32599 52252447 ~ 52259991 (-)
sytl1 LOC106588777 coding upstream 41519 52261367 ~ 52269318 (-)
LOC110519830 LOC106588776 coding upstream 51423 52271271 ~ 52281875 (-)
LOC110496488 LOC106588772 coding upstream 97289 52317137 ~ 52331561 (-)
LOC110496489 LOC106588773 coding upstream 112126 52331974 ~ 52351917 (-)
G1561155 NA non-coding downstream 7271 52171704 ~ 52172049 (-)
G1561154 NA non-coding downstream 9211 52169838 ~ 52170109 (-)
G1561130 NA non-coding downstream 10034 52126649 ~ 52169286 (-)
G1560658 LOC106588725 non-coding downstream 200927 51977466 ~ 51978393 (-)
G1560706 NA non-coding downstream 202596 51974939 ~ 51976724 (-)
G1561201 NA non-coding upstream 21430 52241278 ~ 52241515 (-)
G1561204 NA non-coding upstream 28180 52248028 ~ 52248852 (-)
G1561205 NA non-coding upstream 31628 52251476 ~ 52251818 (-)
G1561166 NA non-coding upstream 40601 52260449 ~ 52260702 (-)
G1561164 NA non-coding upstream 40930 52260778 ~ 52261179 (-)
G1560339 NA other downstream 724035 51381731 ~ 51455285 (-)
thsd7aa LOC106588717 other downstream 1529067 50599944 ~ 50755992 (-)
G1559205 NA other downstream 1555337 50623091 ~ 50623983 (-)
G1558916 NA other downstream 1741861 50436997 ~ 50437459 (-)
G1561167 NA other upstream 29506 52249354 ~ 52250489 (-)
LOC110496491 LOC106588724 other upstream 136904 52352725 ~ 52396978 (-)
G1561279 NA other upstream 425141 52644989 ~ 52647777 (-)
G1562762 NA other upstream 1378802 53598650 ~ 53602694 (-)
tomm7 NA other upstream 1402052 53621900 ~ 53628443 (-)

Expression


Co-expression Network