nkain1 (nkain1)


Basic Information

Item Value
gene id nkain1
gene name nkain1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 52552468 ~ 52557653 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953151.1
ACTTAATTCAATCCCATCATGTCAAATCAGTGATCGCCATCAAGGAACACGGCCCAGTTCCTCATTTGAAATGAGGGGGGCTTGCAATGTCCCCTCCTCGACCCCCCTCGCGCCCACCCCGGCAGGCACCACCGATTGTTGACAAAGACACCGCGAGACAGAAGAGAGCCCTAGTCTTGGTTTTTAGCATTACGCCAACGGAGGCCTACGGATAAACCGCTCGTTGACGGAGAACGAGAAAGCAGCGCAAACGTCTTGAAAACCAACCGTGTGGCCGGCTCGAGGCGATTCGTAATCGTTACCTAGTGGTCGGACCGCAAACCTCGCCGCGTGAAGAAGAGGACACCTCCGGCGAACCACAGCCATCTTTACCTACCCACACCGACAGAATGATCACGGCGGGTCGGGCTGGGTTGGTGTCGGTGTGATTTAACGTATCTCAAGGAGTCTTCCGTACCTAGAAGAACCAAGAGGCCGTGGTCTAGGCGAGATCTGGCCGGGCATGGTGTGATCTGAGTCGGGCAGCCAGTCTGGATCTGACCGGTGACCACCCGTCCTTTCCCCGGAGCCTTTGTGGCTCCAAGCCGCGTCCAGAGCACTCCAAGATGGGGAATTGTGACGGGAGATGCACGCTGGTGGCGATATGTTCACTGCAGCTGatggcaGCACTACAGAGACAGGTGTTTGACTTCCTGGGCTACCAGTGGGCTCCTATCCTGGCCAACTTCCTCCAAATCATGGCCGTCATACTGGGGATCTTTGGAACCGTGCAGTTCAGATCCCGCTACCTCATACTGTATGCAGTGTGGTTGGTGCTGTGGGTGGGATGGAACTCCTTTATCATCTGTTTCTACCTGGAGGTGGGACACTTGTCTCAGgacaggGACTTCCTGATGACTTTCAACACGTCGCTGCATCGGTCATGGTGGATGGAGCATGGTCCTGGTTGCCTAGTAACACCAGTGTTGGACTCCCGCATTGCCCCTGATGACCACCATGTCATCACCGTCTCCGGCTGTCTCCTTGACTACCAGTACATTGAGGTGTTGAGCTCTGCACTACAGGTCTTACTGGCTCTCTTTGGCATTGTGTATGCCTGCTACGTGAGCAAAGTCTTCCAGGATGACGAGGATAGCTttgaTTTCATTGGTGGCTTTGACTCCTATGGTTACCAGCCTCCTCAGAAGACCTCCCACCTCCAACTGCAGCCCCTCTACACTGCTGGGTAGGAGAAGGTGGCGCACCTATCAGACAATACCTCAGCAGGGAAGCAGAGTCGCCATGGGAATAGAACATTCACTCTGTGTGTCACAGTACAACTGAACGATAGActcacctgtgtgtgtatgtgaaaccgtgtgtgtatgtgttaaccAAGGGTAAACTGACTGACACCCCTGAGGTGAATGTACCAGCAGTTCTAGGGGGAAGCAGGGGGAGATGGCGGGGAGACACTGGGCGTGGTCACATCCTAATGGACACTGAGGATATTGAGAGGACACTGCACCTACCGGCTCTCCACATTCCTgcgaccctgtgtgtgtgtgtggcgctaCAGGACTAGCTGGATGACCTCTGAACTATTGTGGAAGGGGCCTCGAAGTCACATGGGATACAGCTCTTCATGTTGTCGTTTTAGAATGTGATGTTGTAATAGAACAGTCGAATGTCGAATTCCAAGCTTGTCCCTAGTTCTGTTGTGACAGGGTGACTTTGTTTAAACCCAATCACGGCAAAAATGGACTGGTTAGAGATTGGGCTTTAGTGTCTCTGGGTAAAGATATGGGGGATTCTGTGCATGTACATATCTGGCTGATGAATGGTTGTTGCTTTTGTTTGGTGATGAGGGGTTGATCGTGTAGCCACGTCCCTTTACATTTCTCCTCTACCTTTAGACGACccagggagaatctcaattgcatactctcctcgcctccttctcaaaaccaatTGGAGGAGAATGTTCAAGGGAAgtgacctctggctttctcatccaatgggttttgaaaaggaggcaaggagagagatGATGTGAGGAGTATGTAATTGAGCTTCTCCCCCAATGTCCTCCTTGACTTTGGGGAAGAATGCGTCCTTCCTCACACCCTACTATCCTTCCTTTTATTCTCTCCTTACACTTCAttcactccctctttccttccatccatccctaaAGATACAGTATCACTGGTCTGACCTGATGATATTGATGAAAGGAATATATGAAGGACACTGATTTATTTCACCAACATACAATAGGTCTGGTCAGGGAGCGTTTCCacgaaggaagagaggagaggataggagggctGTATTTCTGAAGTGGTTTACTTGGatgagacaggtgtgtgtgtgtgtgtggggggggaaaTAAAGAAACTTTCTAAATTAAA

Function

symbol description
nkain1 Predicted to be involved in regulation of sodium ion transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human NKAIN1 (sodium/potassium transporting ATPase interacting 1).

NR:

description
sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1 isoform X2

GO: NA

KEGG:

id description
K22735 NKAIN; sodium/potassium-transporting ATPase subunit beta-1-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953151.1 True 2393 mRNA 0.51 8 52552468 52557653

Neighbor

gene id symbol gene type direction distance location
pum1 pum1 coding downstream 841 52514685 ~ 52551627 (-)
LOC118941185 sdc3 coding downstream 40826 52473210 ~ 52511642 (-)
LOC110496494 LOC106588766 coding downstream 80391 52462369 ~ 52472077 (-)
matn1 matn1 coding downstream 97217 52441106 ~ 52455251 (-)
sesn2 LOC106588768 coding downstream 115859 52428225 ~ 52436609 (-)
snrnp40 LOC106588762 coding upstream 987 52558640 ~ 52563739 (-)
fabp3 LOC100136763 coding upstream 13679 52571332 ~ 52575201 (-)
arhgap4b LOC100380863 coding upstream 49049 52606702 ~ 52637735 (-)
arpp21 LOC106588747 coding upstream 92218 52649871 ~ 52672721 (-)
LOC110496501 pdcd6ip coding upstream 119768 52677421 ~ 52704871 (-)
G1561306 NA non-coding downstream 139465 52411530 ~ 52413003 (-)
G1561305 NA non-coding downstream 140088 52411046 ~ 52412380 (-)
LOC110496491 LOC106588724 non-coding downstream 155873 52352725 ~ 52396978 (-)
G1561239 NA non-coding downstream 202165 52347881 ~ 52350303 (-)
LOC110496488 LOC106588772 non-coding downstream 233936 52317137 ~ 52331561 (-)
G1561290 NA non-coding upstream 51450 52609103 ~ 52612099 (-)
G1561366 NA non-coding upstream 75028 52632681 ~ 52635148 (-)
G1561367 NA non-coding upstream 75835 52633488 ~ 52634262 (-)
G1561285 NA non-coding upstream 82664 52640317 ~ 52641070 (-)
G1561368 NA non-coding upstream 91088 52648741 ~ 52648999 (-)
G1561167 NA other downstream 301979 52249354 ~ 52250489 (-)
trak1b LOC106588779 other downstream 369261 52179320 ~ 52240648 (-)
G1560339 NA other downstream 1097183 51381731 ~ 51455285 (-)
LOC110496463 LOC106588703 other downstream 1338324 51213151 ~ 51214398 (-)
G1561279 NA other upstream 87336 52644989 ~ 52647777 (-)
G1562762 NA other upstream 1040997 53598650 ~ 53602694 (-)
tomm7 NA other upstream 1064247 53621900 ~ 53628443 (-)
G1562816 LOC100136012 other upstream 1194753 53752406 ~ 53752683 (-)
G1562828 NA other upstream 1316757 53874410 ~ 53875592 (-)

Expression


Co-expression Network