arpp21 (LOC106588747)


Basic Information

Item Value
gene id arpp21
gene name LOC106588747
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 52649871 ~ 52672721 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036953161.1
AACCATACCGCCTAAACCTAGACTAGCAGGTGACAACTAGGCTACTGTGTGTGCgagagatagatggatggatagatgggaaagggagagagagagagaattttgtGCGCGTGCCTTTCAGTGTCACGCAGcagagctggtgtgtgtgttggagatACAGCgtgtgggtggagagagaggcagctcGTGCACTGTGCTGGTGTCTGACAGATAGAAAAGCGAAAGGCGCGTAGTGGAAACCAACCGTGACTCACTCAAAAATACACCTCTAAAAAGAGCCGACCCGAGCGTCTGAGGGGAGATTTGACACGGACACGGCGCTCGAGGAGCTCCTGGTTTACGAATCATCTCCCGCGAGttttcAGAGAGGATGTCTGAAGCGATCGTCCCAGAATCCTCAGGGCTGAGGTCATGTAACGAGTTATGCCCCTCCGCTCTGCCATCCTCACCCCCCCTTGCCACAGAGGATGAGTGTCACCATGACAACAGAAAGGTGGAGCAGCAGAAACCCGTCAGTAACCAGGGGCAACCAGCCAGGAAGAGAACCAAGGCCAAAGGCAGGTTGGTGAGGAGCATGGCTGTGTGTGAGGAGTCATTCCCACCATCCCCTCCTGACACCACCCAAGAcagccagAGCTCTGTTGAAGTCACCATGCTGCCAGGTTGCCATGACAACGATGAGGAAGAGCAGAGCAAAGAGCCAAATGTGCCCACGCTAATTATCTCAGACACCAGTCAGGAATACACAGACTCTACTGGGATTGACCTGCACCAGTTTATCATCACCACCCTGAACAGCAATCCCAGGGACAGGATGATgctgttgaaactggagcaggacATGATCGACTTCATCACAGACAacggtcctTATAAGAAATTCCCTCACATGTCTTCCTACCATCGTATGTTGGTCCACCGGGTAGCAGCCTACTTTGGCATGGAACACAATGTGGACCAGACTGGCAAATCTGTCATCATCAATAGCACCAGTAACACACGCATACCAGAGCAGAGGTTTATGGACTATgtccaggaggagagaggagaggagactcagtggagAACCATACTGAAGAGAGACAACGCAGAAGACAACCAGGCGAGGCTCCACCCACTACGCGAGGAGAGGCGGAGCAAAtcaatggaagagagagaggaggagtaccAGAGAGCTAGAGAAAGGATATTCAACCAGGAGCCTGCCTGTCCCCAGGAGACCAGGTCTATAGAGGATGGTAGCCCCCATGCTGCGACTCAGAGAAGGCAGCTCTTTAGGGGTACCAGGGGTAACTCGGGCTCAAGCCGACAGAGCAGCACGGAGACTGACTATAGTCGCTATAGTAACTGGAGCAGCACTGACTCAGGTCGCTATAGCAACGACCCCCGACCCTGGAGCAGCACAGACTCAGACTCTGCCTATCAGAGGCCCGCCCCCAAGGCCCGACCAGCCAATCACAGCTGGGACGCACGAGatgaccatgcccccaccacaggCTCCAACTACCTCACGGTGCCCATGGAGAACGGGATTCCACCAGGAAGTATATTACTGAACCCacatacagGCCAGCCCTTCTTGAACCCAGACGGAAGTCCTGCCATCTACAACCCCCCCGACCCCCAGCAGCCAACAAGAAGCCAGCCTCAGCAGCAGGCCCCTCTGCCGCAGCAGCCAATGGCTGGCCACACAGTCCCTCAGGTGGTTCAATATTCGTCCGTCTCTTATCCTCCCCAGCAGTTGCAATACTCTACGAGCGAGGACCTGTCGTCTCAGTTTGGTCACATTACTGTGAGCTGTCAGCCATTGGGGGAAGCTCCGTCTCTATACCCTCCCTTGGCCTCTCCCACACAGAGTTATGTCTATAccgcccctccccctcctcacaaCCCCCCCAGCTACTGCCAACCCCCTCCAACTCAGGTGCCTGTGtattactactctactactcagTATCCTACCTCAGCACCCCAAAGACCTGCCACACCTACCCAGGCCATACAGCCTACAgGTTACTCTCCTGTCGTAGCCAATCAGCAGCAGACCTACCAGGGGATGATGAGTTTGCAGCTGCCTCAGAACCAAGCCCAAAGATTGCTGGGTTCTTATCCACCTGGCTCCTCCCACCCATGTGGTGTAACACAGGGTGGTGTGGGGGTATCGTATCCCCAGACTGGTCTCATGTCGCGGGGTGAGGGGGGTTACTGCTGCATGGTATCTCCAACCTGTCCCCCTGGTCCcataccccctccccctctacaCACCGGCTGCCATGCCTCCAGCTGTAGCAACATCAGCAGCCAGGGGTGGGCGGGAAAATACTAACAcgaccccacacatacacacgcccCCACCCAAACTAAACTTACAtaacccccacacatacacacacttgacCTCCCTTCCCCCCCACCTCTACTTGCACAACCCCACCGGACTGTGTTGATTGAGATGCAACCAGTGTTCaagctgtcacacacacagtataccaCAGGCAATGTATTGTGCCAAAGCTGTATCAGAGGTACTGTACTGATTTAAAAGCATCATTTATATACTCCAGTTGAGTTTTGTATGGATATGAAATGATTATATATATGTATTGTAGTGTTTGAGCAGAATAAACTGATGTGGCTGCTTTGACAGGGCACCTTTCTAACGGC
>XM_036953160.1
AATGGAGTCAAGCTAGCCACAAGTTCTGACAGCTCAATCGTCATGAAACGCAAATACAGcgatgagtttctctctcttgGTACAAACTTTGAGATATAACGAGGTGCAcccacaatgtgttttgtgcggggaagtgcttagtaatgagtctctcaaaacaaacaaattaaaaACGACAGgtcctgaccaaacatccacagcatgaCAGTAAAACCCAGGGAGTTCTTTCAGAGCAGGACTGAATGCTTCAGGTAACAGTGCCTCGACAGTGGAAAAATAAATAGccaagagggagagtgggggagtGAAGCAGAGAAGGAAATGAGAGATTAAAAGGGAGTAAGAAAACCTCTAGCTGTTCTATGCAAACGTTCGTTACCCACCACTAAGCCACAATGAGACAGttttcAGAGAGGATGTCTGAAGCGATCGTCCCAGAATCCTCAGGGCTGAGGTCATGTAACGAGTTATGCCCCTCCGCTCTGCCATCCTCACCCCCCCTTGCCACAGAGGATGAGTGTCACCATGACAACAGAAAGGTGGAGCAGCAGAAACCCGTCAGTAACCAGGGGCAACCAGCCAGGAAGAGAACCAAGGCCAAAGGCAGGTTGGTGAGGAGCATGGCTGTGTGTGAGGAGTCATTCCCACCATCCCCTCCTGACACCACCCAAGAcagccagAGCTCTGTTGAAGTCACCATGCTGCCAGGTTGCCATGACAACGATGAGGAAGAGCAGAGCAAAGAGCCAAATGTGCCCACGCTAATTATCTCAGACACCAGTCAGGAATACACAGACTCTACTGGGATTGACCTGCACCAGTTTATCATCACCACCCTGAACAGCAATCCCAGGGACAGGATGATgctgttgaaactggagcaggacATGATCGACTTCATCACAGACAacggtcctTATAAGAAATTCCCTCACATGTCTTCCTACCATCGTATGTTGGTCCACCGGGTAGCAGCCTACTTTGGCATGGAACACAATGTGGACCAGACTGGCAAATCTGTCATCATCAATAGCACCAGTAACACACGCATACCAGAGCAGAGGTTTATGGACTATgtccaggaggagagaggagaggagactcagtggagAACCATACTGAAGAGAGACAACGCAGAAGACAACCAGGCGAGGCTCCACCCACTACGCGAGGAGAGGCGGAGCAAAtcaatggaagagagagaggaggagtaccAGAGAGCTAGAGAAAGGATATTCAACCAGGAGCCTGCCTGTCCCCAGGAGACCAGGTCTATAGAGGATGGTAGCCCCCATGCTGCGACTCAGAGAAGGCAGCTCTTTAGGGGTACCAGGGGTAACTCGGGCTCAAGCCGACAGAGCAGCACGGAGACTGACTATAGTCGCTATAGTAACTGGAGCAGCACTGACTCAGGTCGCTATAGCAACGACCCCCGACCCTGGAGCAGCACAGACTCAGACTCTGCCTATCAGAGGCCCGCCCCCAAGGCCCGACCAGCCAATCACAGCTGGGACGCACGAGatgaccatgcccccaccacaggCTCCAACTACCTCACGGTGCCCATGGAGAACGGGATTCCACCAGGAAGTATATTACTGAACCCacatacagGCCAGCCCTTCTTGAACCCAGACGGAAGTCCTGCCATCTACAACCCCCCCGACCCCCAGCAGCCAACAAGAAGCCAGCCTCAGCAGCAGGCCCCTCTGCCGCAGCAGCCAATGGCTGGCCACACAGTCCCTCAGGTGGTTCAATATTCGTCCGTCTCTTATCCTCCCCAGCAGTTGCAATACTCTACGAGCGAGGACCTGTCGTCTCAGTTTGGTCACATTACTGTGAGCTGTCAGCCATTGGGGGAAGCTCCGTCTCTATACCCTCCCTTGGCCTCTCCCACACAGAGTTATGTCTATAccgcccctccccctcctcacaaCCCCCCCAGCTACTGCCAACCCCCTCCAACTCAGGTGCCTGTGtattactactctactactcagTATCCTACCTCAGCACCCCAAAGACCTGCCACACCTACCCAGGCCATACAGCCTACAgGTTACTCTCCTGTCGTAGCCAATCAGCAGCAGACCTACCAGGGGATGATGAGTTTGCAGCTGCCTCAGAACCAAGCCCAAAGATTGCTGGGTTCTTATCCACCTGGCTCCTCCCACCCATGTGGTGTAACACAGGGTGGTGTGGGGGTATCGTATCCCCAGACTGGTCTCATGTCGCGGGGTGAGGGGGGTTACTGCTGCATGGTATCTCCAACCTGTCCCCCTGGTCCcataccccctccccctctacaCACCGGCTGCCATGCCTCCAGCTGTAGCAACATCAGCAGCCAGGGGTGGGCGGGAAAATACTAACAcgaccccacacatacacacgcccCCACCCAAACTAAACTTACAtaacccccacacatacacacacttgacCTCCCTTCCCCCCCACCTCTACTTGCACAACCCCACCGGACTGTGTTGATTGAGATGCAACCAGTGTTCaagctgtcacacacacagtataccaCAGGCAATGTATTGTGCCAAAGCTGTATCAGAGGTACTGTACTGATTTAAAAGCATCATTTATATACTCCAGTTGAGTTTTGTATGGATATGAAATGATTATATATATGTATTGTAGTGTTTGAGCAGAATAAACTGATGTGGCTGCTTTGACAGGGCACCTTTCTAACGGC
>XM_036953162.1
TATCTCACTCGCCGATGTCACCAAATGGAGTCAAGCTAGCCACAAGTTCTGACAGCTCAATCGTCATGAAACGCAAATACAGcgatgagtttctctctcttgGTACAAACTTTGAGATATAACGAGGTGCAcccacaatgtgttttgtgcggggaagtgcttagtaatgagtctctcaaaacaaacaaattaaaaACGACAGgtcctgaccaaacatccacagcatgaCAGTAAAACCCAGGGAGTTCTTTCAGAGCAGGACTGAATGCTTCAGGTAACAGTGCCTCGACAGTGGAAAAttttcAGAGAGGATGTCTGAAGCGATCGTCCCAGAATCCTCAGGGCTGAGGTCATGTAACGAGTTATGCCCCTCCGCTCTGCCATCCTCACCCCCCCTTGCCACAGAGGATGAGTGTCACCATGACAACAGAAAGGTGGAGCAGCAGAAACCCGTCAGTAACCAGGGGCAACCAGCCAGGAAGAGAACCAAGGCCAAAGGCAGGTTGGTGAGGAGCATGGCTGTGTGTGAGGAGTCATTCCCACCATCCCCTCCTGACACCACCCAAGAcagccagAGCTCTGTTGAAGTCACCATGCTGCCAGGTTGCCATGACAACGATGAGGAAGAGCAGAGCAAAGAGCCAAATGTGCCCACGCTAATTATCTCAGACACCAGTCAGGAATACACAGACTCTACTGGGATTGACCTGCACCAGTTTATCATCACCACCCTGAACAGCAATCCCAGGGACAGGATGATgctgttgaaactggagcaggacATGATCGACTTCATCACAGACAacggtcctTATAAGAAATTCCCTCACATGTCTTCCTACCATCGTATGTTGGTCCACCGGGTAGCAGCCTACTTTGGCATGGAACACAATGTGGACCAGACTGGCAAATCTGTCATCATCAATAGCACCAGTAACACACGCATACCAGAGCAGAGGTTTATGGACTATgtccaggaggagagaggagaggagactcagtggagAACCATACTGAAGAGAGACAACGCAGAAGACAACCAGGCGAGGCTCCACCCACTACGCGAGGAGAGGCGGAGCAAAtcaatggaagagagagaggaggagtaccAGAGAGCTAGAGAAAGGATATTCAACCAGGAGCCTGCCTGTCCCCAGGAGACCAGGTCTATAGAGGATGGTAGCCCCCATGCTGCGACTCAGAGAAGGCAGCTCTTTAGGGGTACCAGGGGTAACTCGGGCTCAAGCCGACAGAGCAGCACGGAGACTGACTATAGTCGCTATAGTAACTGGAGCAGCACTGACTCAGGTCGCTATAGCAACGACCCCCGACCCTGGAGCAGCACAGACTCAGACTCTGCCTATCAGAGGCCCGCCCCCAAGGCCCGACCAGCCAATCACAGCTGGGACGCACGAGatgaccatgcccccaccacaggCTCCAACTACCTCACGGTGCCCATGGAGAACGGGATTCCACCAGGAAGTATATTACTGAACCCacatacagGCCAGCCCTTCTTGAACCCAGACGGAAGTCCTGCCATCTACAACCCCCCCGACCCCCAGCAGCCAACAAGAAGCCAGCCTCAGCAGCAGGCCCCTCTGCCGCAGCAGCCAATGGCTGGCCACACAGTCCCTCAGGTGGTTCAATATTCGTCCGTCTCTTATCCTCCCCAGCAGTTGCAATACTCTACGAGCGAGGACCTGTCGTCTCAGTTTGGTCACATTACTGTGAGCTGTCAGCCATTGGGGGAAGCTCCGTCTCTATACCCTCCCTTGGCCTCTCCCACACAGAGTTATGTCTATAccgcccctccccctcctcacaaCCCCCCCAGCTACTGCCAACCCCCTCCAACTCAGGTGCCTGTGtattactactctactactcagTATCCTACCTCAGCACCCCAAAGACCTGCCACACCTACCCAGGCCATACAGCCTACAgGTTACTCTCCTGTCGTAGCCAATCAGCAGCAGACCTACCAGGGGATGATGAGTTTGCAGCTGCCTCAGAACCAAGCCCAAAGATTGCTGGGTTCTTATCCACCTGGCTCCTCCCACCCATGTGGTGTAACACAGGGTGGTGTGGGGGTATCGTATCCCCAGACTGGTCTCATGTCGCGGGGTGAGGGGGGTTACTGCTGCATGGTATCTCCAACCTGTCCCCCTGGTCCcataccccctccccctctacaCACCGGCTGCCATGCCTCCAGCTGTAGCAACATCAGCAGCCAGGGGTGGGCGGGAAAATACTAACAcgaccccacacatacacacgcccCCACCCAAACTAAACTTACAtaacccccacacatacacacacttgacCTCCCTTCCCCCCCACCTCTACTTGCACAACCCCACCGGACTGTGTTGATTGAGATGCAACCAGTGTTCaagctgtcacacacacagtataccaCAGGCAATGTATTGTGCCAAAGCTGTATCAGAGGTACTGTACTGATTTAAAAGCATCATTTATATACTCCAGTTGAGTTTTGTATGGATATGAAATGATTATATATATGTATTGTAGTGTTTGAGCAGAATAAACTGATGTGGCTGCTTTGACAGGGCACCTTTCTAACGGC

Function

NR:

description
cAMP-regulated phosphoprotein 21-like

GO: NA

KEGG:

id description
K02360 ENC; a component of the cytoplasm (encore)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036953161.1 False 2664 mRNA 0.54 19 52649871 52665504
XM_036953160.1 False 2710 mRNA 0.52 20 52649871 52672698
XM_036953162.1 True 2605 mRNA 0.53 19 52649871 52672721

Neighbor

gene id symbol gene type direction distance location
arhgap4b LOC100380863 coding downstream 12136 52606702 ~ 52637735 (-)
fabp3 LOC100136763 coding downstream 74670 52571332 ~ 52575201 (-)
snrnp40 LOC106588762 coding downstream 86132 52558640 ~ 52563739 (-)
nkain1 nkain1 coding downstream 92218 52552468 ~ 52557653 (-)
pum1 pum1 coding downstream 98244 52514685 ~ 52551627 (-)
LOC110496501 pdcd6ip coding upstream 4700 52677421 ~ 52704871 (-)
ubp1 LOC106588748 coding upstream 39832 52712553 ~ 52728916 (-)
clasp2 clasp2 coding upstream 58788 52731509 ~ 52824972 (-)
fbxl2 LOC106588753 coding upstream 165543 52838264 ~ 52858741 (-)
LOC110496507 LOC106588754 coding upstream 227950 52900671 ~ 52905814 (-)
G1561368 NA non-coding downstream 872 52648741 ~ 52648999 (-)
G1561285 NA non-coding downstream 8801 52640317 ~ 52641070 (-)
G1561366 NA non-coding downstream 14723 52632681 ~ 52635148 (-)
G1561367 NA non-coding downstream 15609 52633488 ~ 52634262 (-)
G1561290 NA non-coding downstream 37772 52609103 ~ 52612099 (-)
G1561378 NA non-coding upstream 2229 52674950 ~ 52675170 (-)
G1561288 NA non-coding upstream 3028 52675749 ~ 52740009 (-)
G1561396 NA non-coding upstream 106661 52779382 ~ 52779744 (-)
G1562427 NA non-coding upstream 154329 52827050 ~ 52831250 (-)
G1562451 NA non-coding upstream 233971 52906692 ~ 52918374 (-)
G1561279 NA other downstream 2094 52644989 ~ 52647777 (-)
LOC110496491 LOC106588724 other downstream 292561 52352725 ~ 52396978 (-)
G1561167 NA other downstream 399382 52249354 ~ 52250489 (-)
trak1b LOC106588779 other downstream 466664 52179320 ~ 52240648 (-)
G1560339 NA other downstream 1194586 51381731 ~ 51455285 (-)
G1562762 NA other upstream 925929 53598650 ~ 53602694 (-)
tomm7 NA other upstream 949179 53621900 ~ 53628443 (-)
G1562816 LOC100136012 other upstream 1079685 53752406 ~ 53752683 (-)
G1562828 NA other upstream 1201689 53874410 ~ 53875592 (-)
mrpl3 mrpl3 other upstream 1216988 53887137 ~ 53895002 (-)

Expression


Co-expression Network